RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 ARHGAP35Q9NRY4 1499 aa19.34■□□□□ 0.69
SCAF8-205ENST00000464628 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
SCAF8-205ENST00000464628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.31■□□□□ 0.683e-7■□□□□ 9.3
SCAF8-205ENST00000464628 SPAG9O60271 1321 aaKnown RBP19.3■□□□□ 0.68
SCAF8-205ENST00000464628 EEA1Q15075 1411 aa19.3■□□□□ 0.68
SCAF8-205ENST00000464628 TNRQ92752 1358 aa19.3■□□□□ 0.68
SCAF8-205ENST00000464628 PZPP20742 1482 aa19.29■□□□□ 0.68
SCAF8-205ENST00000464628 UGGT1Q9NYU2 1555 aa19.28■□□□□ 0.68
SCAF8-205ENST00000464628 GGT6Q6P531 493 aa19.28■□□□□ 0.68
SCAF8-205ENST00000464628 ANKLE2Q86XL3 938 aa19.26■□□□□ 0.67
SCAF8-205ENST00000464628 KDM5DQ9BY66 1539 aa19.25■□□□□ 0.67
SCAF8-205ENST00000464628 FAM135AQ9P2D6 1515 aa19.25■□□□□ 0.67
SCAF8-205ENST00000464628 NLRP1Q9C000 1473 aa19.24■□□□□ 0.67
SCAF8-205ENST00000464628 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
SCAF8-205ENST00000464628 GPATCH8Q9UKJ3 1502 aaKnown RBP19.22■□□□□ 0.67
SCAF8-205ENST00000464628 ROBO1Q9Y6N7 1651 aa19.22■□□□□ 0.67
SCAF8-205ENST00000464628 FBXO31Q5XUX0 539 aaPredicted RBP19.22■□□□□ 0.67
SCAF8-205ENST00000464628 KIAA1107Q9UPP5 1409 aa19.22■□□□□ 0.67
SCAF8-205ENST00000464628 HNRNPMP52272 730 aaKnown RBP eCLIP19.2■□□□□ 0.662e-6■■■□□ 15.7
SCAF8-205ENST00000464628 FAM135BQ49AJ0 1406 aa19.19■□□□□ 0.66
SCAF8-205ENST00000464628 PLEKHH2Q8IVE3 1493 aa19.18■□□□□ 0.66
SCAF8-205ENST00000464628 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
SCAF8-205ENST00000464628 THEMISQ8N1K5 641 aaPredicted RBP19.17■□□□□ 0.66
SCAF8-205ENST00000464628 UPF1Q92900 1129 aaKnown RBP eCLIP19.17■□□□□ 0.66
SCAF8-205ENST00000464628 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
SCAF8-205ENST00000464628 UBR1Q8IWV7 1749 aa19.16■□□□□ 0.66
SCAF8-205ENST00000464628 CASKIN1Q8WXD9 1431 aa19.13■□□□□ 0.65
SCAF8-205ENST00000464628 SRCAPQ6ZRS2 3230 aa19.12■□□□□ 0.65
SCAF8-205ENST00000464628 PHLPP1O60346 1717 aa19.11■□□□□ 0.65
SCAF8-205ENST00000464628 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
SCAF8-205ENST00000464628 DHX29Q7Z478 1369 aaKnown RBP19.09■□□□□ 0.65
SCAF8-205ENST00000464628 RTEL1-TNFRSF6BF6WH68 1400 aa19.08■□□□□ 0.65
SCAF8-205ENST00000464628 MBD5Q9P267 1494 aa19.08■□□□□ 0.64
SCAF8-205ENST00000464628 SCAF11Q99590 1463 aaKnown RBP19.07■□□□□ 0.64
SCAF8-205ENST00000464628 LRP6O75581 1613 aa19.05■□□□□ 0.64
SCAF8-205ENST00000464628 COL16A1Q07092 1604 aaPredicted RBP19.05■□□□□ 0.64
SCAF8-205ENST00000464628 ARHGAP23Q9P227 1491 aa19.04■□□□□ 0.64
SCAF8-205ENST00000464628 SLIT1O75093 1534 aa19.04■□□□□ 0.64
SCAF8-205ENST00000464628 NCOA2Q15596 1464 aa19.03■□□□□ 0.64
SCAF8-205ENST00000464628 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
SCAF8-205ENST00000464628 FYCO1Q9BQS8 1478 aa19.03■□□□□ 0.64
SCAF8-205ENST00000464628 ERVK-7P63135 1459 aa19.03■□□□□ 0.64
SCAF8-205ENST00000464628 TIAM1Q13009 1591 aa19.02■□□□□ 0.64
SCAF8-205ENST00000464628 WASHC2CQ9Y4E1 1318 aa19■□□□□ 0.63
SCAF8-205ENST00000464628 ABCC3O15438 1527 aa19■□□□□ 0.63
SCAF8-205ENST00000464628 KIF3BO15066 747 aa19■□□□□ 0.63
SCAF8-205ENST00000464628 CFDP1Q9UEE9 299 aaPredicted RBP19■□□□□ 0.63
SCAF8-205ENST00000464628 JCADQ9P266 1359 aa18.99■□□□□ 0.63
SCAF8-205ENST00000464628 TMEM94Q12767 1356 aa18.98■□□□□ 0.63
SCAF8-205ENST00000464628 CEP152O94986 1710 aa18.97■□□□□ 0.63
SCAF8-205ENST00000464628 SHPRHQ149N8 1683 aa18.97■□□□□ 0.63
SCAF8-205ENST00000464628 NWD1Q149M9 1564 aa18.97■□□□□ 0.63
SCAF8-205ENST00000464628 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
SCAF8-205ENST00000464628 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
SCAF8-205ENST00000464628 UBTFP17480 764 aaKnown RBP18.96■□□□□ 0.63
SCAF8-205ENST00000464628 TRIM52Q96A61 297 aa18.96■□□□□ 0.63
SCAF8-205ENST00000464628 ZNF644Q9H582 1327 aaPredicted RBP18.96■□□□□ 0.63
SCAF8-205ENST00000464628 MROH1Q8NDA8 1641 aa18.96■□□□□ 0.63
SCAF8-205ENST00000464628 LTKP29376 864 aa18.95■□□□□ 0.62
SCAF8-205ENST00000464628 CFAP65Q6ZU64 1925 aaKnown RBP18.94■□□□□ 0.62
SCAF8-205ENST00000464628 CAMSAP2Q08AD1 1489 aa18.94■□□□□ 0.62
SCAF8-205ENST00000464628 PRDM15P57071 1507 aaPredicted RBP18.94■□□□□ 0.62
SCAF8-205ENST00000464628 CCDC141Q6ZP82 1450 aa18.93■□□□□ 0.62
SCAF8-205ENST00000464628 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
SCAF8-205ENST00000464628 PIK3C2BO00750 1634 aa18.91■□□□□ 0.62
SCAF8-205ENST00000464628 EIF2AK4Q9P2K8 1649 aaKnown RBP18.9■□□□□ 0.62
SCAF8-205ENST00000464628 ZNF772Q68DY9 489 aaPredicted RBP18.9■□□□□ 0.62
SCAF8-205ENST00000464628 NKTRP30414 1462 aaKnown RBP18.9■□□□□ 0.62
SCAF8-205ENST00000464628 TET3O43151 1660 aa18.89■□□□□ 0.61
SCAF8-205ENST00000464628 KDM5AP29375 1690 aaKnown RBP18.89■□□□□ 0.61
SCAF8-205ENST00000464628 FGD6Q6ZV73 1430 aa18.89■□□□□ 0.61
SCAF8-205ENST00000464628 AHDC1Q5TGY3 1603 aaPredicted RBP18.87■□□□□ 0.61
SCAF8-205ENST00000464628 TXNDC2Q86VQ3 553 aa18.87■□□□□ 0.61
SCAF8-205ENST00000464628 SPATA31A6Q5VVP1 1343 aa18.86■□□□□ 0.61
SCAF8-205ENST00000464628 DIP2AQ14689 1571 aa18.85■□□□□ 0.61
SCAF8-205ENST00000464628 RGS12O14924 1447 aa18.84■□□□□ 0.61
SCAF8-205ENST00000464628 RBM33Q96EV2 1170 aaKnown RBP18.84■□□□□ 0.61
SCAF8-205ENST00000464628 ARHGEF5Q12774 1597 aa18.84■□□□□ 0.61
SCAF8-205ENST00000464628 SETBP1Q9Y6X0 1596 aa18.84■□□□□ 0.61
SCAF8-205ENST00000464628 KCNA6P17658 529 aa18.83■□□□□ 0.6
SCAF8-205ENST00000464628 RXRBP28702 533 aa18.83■□□□□ 0.6
SCAF8-205ENST00000464628 EHBP1L1Q8N3D4 1523 aa18.83■□□□□ 0.6
SCAF8-205ENST00000464628 MSH6P52701 1360 aa18.81■□□□□ 0.6
SCAF8-205ENST00000464628 CHD2O14647 1828 aaKnown RBP18.81■□□□□ 0.6
SCAF8-205ENST00000464628 TMEM2Q9UHN6 1383 aa18.81■□□□□ 0.6
SCAF8-205ENST00000464628 MEX3CQ5U5Q3 659 aaKnown RBP18.8■□□□□ 0.6
SCAF8-205ENST00000464628 MAST1Q9Y2H9 1570 aa18.8■□□□□ 0.6
SCAF8-205ENST00000464628 PROSER2Q86WR7 435 aaPredicted RBP18.79■□□□□ 0.6
SCAF8-205ENST00000464628 SLAIN2Q9P270 581 aa18.79■□□□□ 0.6
SCAF8-205ENST00000464628 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
SCAF8-205ENST00000464628 EID1Q9Y6B2 187 aa18.77■□□□□ 0.6
SCAF8-205ENST00000464628 EFCAB6Q5THR3 1501 aa18.77■□□□□ 0.6
SCAF8-205ENST00000464628 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
SCAF8-205ENST00000464628 ARHGAP31Q2M1Z3 1444 aa18.75■□□□□ 0.59
SCAF8-205ENST00000464628 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.74■□□□□ 0.59
SCAF8-205ENST00000464628 SLC26A8Q96RN1 970 aa18.72■□□□□ 0.59
SCAF8-205ENST00000464628 AFF2P51816 1311 aa18.72■□□□□ 0.59
SCAF8-205ENST00000464628 NHSL1Q5SYE7 1610 aa18.7■□□□□ 0.58
SCAF8-205ENST00000464628 RSPH4AQ5TD94 716 aa18.69■□□□□ 0.58
SCAF8-205ENST00000464628 ADGRB3O60242 1522 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms