RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 RIMBP3BA6NNM3 1639 aa30.6■■■□□ 2.49
PDLIM2-216ENST00000464275 RIMBP3Q9UFD9 1639 aa30.6■■■□□ 2.49
PDLIM2-216ENST00000464275 KIDINS220Q9ULH0 1771 aa30.6■■■□□ 2.49
PDLIM2-216ENST00000464275 UHRF1BP1Q6BDS2 1440 aa30.6■■■□□ 2.49
PDLIM2-216ENST00000464275 ZNF518AQ6AHZ1 1483 aa30.57■■■□□ 2.49
PDLIM2-216ENST00000464275 CCDC144AA2RUR9 1427 aa30.57■■■□□ 2.48
PDLIM2-216ENST00000464275 ATP10AO60312 1499 aa30.56■■■□□ 2.48
PDLIM2-216ENST00000464275 YTHDC1Q96MU7 727 aaKnown RBP30.56■■■□□ 2.48
PDLIM2-216ENST00000464275 PLA2R1Q13018 1463 aa30.55■■■□□ 2.48
PDLIM2-216ENST00000464275 E9PCH4 1651 aa30.54■■■□□ 2.48
PDLIM2-216ENST00000464275 KDM5CP41229 1560 aa30.52■■■□□ 2.48
PDLIM2-216ENST00000464275 TET3O43151 1660 aa30.52■■■□□ 2.48
PDLIM2-216ENST00000464275 SPATA31E1Q6ZUB1 1445 aa30.52■■■□□ 2.48
PDLIM2-216ENST00000464275 DHX29Q7Z478 1369 aaKnown RBP30.51■■■□□ 2.47
PDLIM2-216ENST00000464275 RALGAPBQ86X10 1494 aa30.5■■■□□ 2.47
PDLIM2-216ENST00000464275 VWDEQ8N2E2 1590 aa30.49■■■□□ 2.47
PDLIM2-216ENST00000464275 MYT1LQ9UL68 1186 aa30.49■■■□□ 2.47
PDLIM2-216ENST00000464275 NEO1Q92859 1461 aa30.49■■■□□ 2.47
PDLIM2-216ENST00000464275 MAP3K4Q9Y6R4 1608 aa30.48■■■□□ 2.47
PDLIM2-216ENST00000464275 POGZQ7Z3K3 1410 aa30.48■■■□□ 2.47
PDLIM2-216ENST00000464275 SPHKAPQ2M3C7 1700 aa30.47■■■□□ 2.47
PDLIM2-216ENST00000464275 WASHC2AQ641Q2 1341 aa30.46■■■□□ 2.47
PDLIM2-216ENST00000464275 GLI2P10070 1586 aa30.45■■■□□ 2.47
PDLIM2-216ENST00000464275 HECW2Q9P2P5 1572 aa30.45■■■□□ 2.47
PDLIM2-216ENST00000464275 PRDM15P57071 1507 aaPredicted RBP30.45■■■□□ 2.47
PDLIM2-216ENST00000464275 KANK1Q14678 1352 aa30.45■■■□□ 2.46
PDLIM2-216ENST00000464275 CYB5RLQ6IPT4 315 aa30.45■■■□□ 2.46
PDLIM2-216ENST00000464275 ZNF326Q5BKZ1 582 aaKnown RBP30.44■■■□□ 2.46
PDLIM2-216ENST00000464275 MROH1Q8NDA8 1641 aa30.44■■■□□ 2.46
PDLIM2-216ENST00000464275 MLH3Q9UHC1 1453 aa30.43■■■□□ 2.46
PDLIM2-216ENST00000464275 DCAF11Q8TEB1 546 aa30.41■■■□□ 2.46
PDLIM2-216ENST00000464275 ANP32CO43423 234 aa30.41■■■□□ 2.46
PDLIM2-216ENST00000464275 CEP152O94986 1710 aa30.4■■■□□ 2.46
PDLIM2-216ENST00000464275 CCDC7Q96M83 1385 aa30.39■■■□□ 2.46
PDLIM2-216ENST00000464275 TRPM1Q7Z4N2 1603 aa30.39■■■□□ 2.46
PDLIM2-216ENST00000464275 TRPM2O94759 1503 aa30.39■■■□□ 2.46
PDLIM2-216ENST00000464275 RNF17Q9BXT8 1623 aaKnown RBP30.39■■■□□ 2.45
PDLIM2-216ENST00000464275 A2MP01023 1474 aa30.39■■■□□ 2.45
PDLIM2-216ENST00000464275 KIF3BO15066 747 aa30.38■■■□□ 2.45
PDLIM2-216ENST00000464275 KDM2AQ9Y2K7 1162 aa30.37■■■□□ 2.45
PDLIM2-216ENST00000464275 USP47Q96K76 1375 aa30.37■■■□□ 2.45
PDLIM2-216ENST00000464275 BCORL1Q5H9F3 1711 aa30.36■■■□□ 2.45
PDLIM2-216ENST00000464275 RICTORQ6R327 1708 aa30.34■■■□□ 2.45
PDLIM2-216ENST00000464275 PTPRTO14522 1441 aa30.34■■■□□ 2.45
PDLIM2-216ENST00000464275 PRAG1Q86YV5 1406 aa30.34■■■□□ 2.45
PDLIM2-216ENST00000464275 ABCA6Q8N139 1617 aa30.33■■■□□ 2.45
PDLIM2-216ENST00000464275 CCER2I3L3R5 266 aa30.33■■■□□ 2.45
PDLIM2-216ENST00000464275 CNTLNQ9NXG0 1405 aa30.32■■■□□ 2.45
PDLIM2-216ENST00000464275 C11orf95C9JLR9 678 aaPredicted RBP30.32■■■□□ 2.44
PDLIM2-216ENST00000464275 FRMPD1Q5SYB0 1578 aa30.3■■■□□ 2.44
PDLIM2-216ENST00000464275 CLTCL1P53675 1640 aa30.3■■■□□ 2.44
PDLIM2-216ENST00000464275 LAMC1P11047 1609 aa30.3■■■□□ 2.44
PDLIM2-216ENST00000464275 RGL3Q3MIN7 710 aa30.29■■■□□ 2.44
PDLIM2-216ENST00000464275 LMTK2Q8IWU2 1503 aa30.29■■■□□ 2.44
PDLIM2-216ENST00000464275 DIP2BQ9P265 1576 aa30.28■■■□□ 2.44
PDLIM2-216ENST00000464275 CARD11Q9BXL7 1154 aa30.28■■■□□ 2.44
PDLIM2-216ENST00000464275 EFCAB6Q5THR3 1501 aa30.27■■■□□ 2.44
PDLIM2-216ENST00000464275 KIF7Q2M1P5 1343 aa30.26■■■□□ 2.43
PDLIM2-216ENST00000464275 PPRC1Q5VV67 1664 aaKnown RBP30.25■■■□□ 2.43
PDLIM2-216ENST00000464275 ROCK2O75116 1388 aaKnown RBP30.24■■■□□ 2.43
PDLIM2-216ENST00000464275 NEURL4Q96JN8 1562 aa30.23■■■□□ 2.43
PDLIM2-216ENST00000464275 KIF1BO60333 1816 aa30.22■■■□□ 2.43
PDLIM2-216ENST00000464275 DIP2CQ9Y2E4 1556 aa30.22■■■□□ 2.43
PDLIM2-216ENST00000464275 ARID4BQ4LE39 1312 aaPredicted RBP30.22■■■□□ 2.43
PDLIM2-216ENST00000464275 GPRASP1Q5JY77 1395 aa30.19■■■□□ 2.42
PDLIM2-216ENST00000464275 TSPOAP1O95153 1857 aa30.18■■■□□ 2.42
PDLIM2-216ENST00000464275 RAPGEF3O95398 923 aa30.18■■■□□ 2.42
PDLIM2-216ENST00000464275 MADDQ8WXG6 1647 aa30.16■■■□□ 2.42
PDLIM2-216ENST00000464275 STAC3Q96MF2 364 aa30.15■■■□□ 2.42
PDLIM2-216ENST00000464275 FAM69CQ0P6D2 419 aa30.14■■■□□ 2.42
PDLIM2-216ENST00000464275 CFAP65Q6ZU64 1925 aaKnown RBP30.11■■■□□ 2.41
PDLIM2-216ENST00000464275 ZMYM4Q5VZL5 1548 aa30.11■■■□□ 2.41
PDLIM2-216ENST00000464275 ST20-MTHFSA0A0A6YYL1 179 aa30.09■■■□□ 2.41
PDLIM2-216ENST00000464275 CAMSAP1Q5T5Y3 1602 aa30.09■■■□□ 2.41
PDLIM2-216ENST00000464275 IFT172Q9UG01 1749 aa30.08■■■□□ 2.41
PDLIM2-216ENST00000464275 ABCC3O15438 1527 aa30.08■■■□□ 2.41
PDLIM2-216ENST00000464275 ZC3H13Q5T200 1668 aaKnown RBP30.07■■■□□ 2.4
PDLIM2-216ENST00000464275 NBPF1Q3BBV0 1214 aa30.07■■■□□ 2.4
PDLIM2-216ENST00000464275 KIAA1210Q9ULL0 1709 aa30.07■■■□□ 2.4
PDLIM2-216ENST00000464275 GGT6Q6P531 493 aa30.06■■■□□ 2.4
PDLIM2-216ENST00000464275 KIF13AQ9H1H9 1805 aa30.06■■■□□ 2.4
PDLIM2-216ENST00000464275 UGGT1Q9NYU2 1555 aa30.05■■■□□ 2.4
PDLIM2-216ENST00000464275 MROH2AA6NES4 1674 aa30.04■■■□□ 2.4
PDLIM2-216ENST00000464275 IQGAP1P46940 1657 aa30.02■■■□□ 2.4
PDLIM2-216ENST00000464275 NPATQ14207 1427 aa30.02■■■□□ 2.4
PDLIM2-216ENST00000464275 YEATS2Q9ULM3 1422 aa30.02■■■□□ 2.4
PDLIM2-216ENST00000464275 PRKRIP1Q9H875 184 aaPredicted RBP30■■■□□ 2.39
PDLIM2-216ENST00000464275 WASHC2CQ9Y4E1 1318 aa29.99■■■□□ 2.39
PDLIM2-216ENST00000464275 MYOM2P54296 1465 aa29.98■■■□□ 2.39
PDLIM2-216ENST00000464275 POLR3GLQ9BT43 218 aa29.98■■■□□ 2.39
PDLIM2-216ENST00000464275 ADGRB3O60242 1522 aa29.97■■■□□ 2.39
PDLIM2-216ENST00000464275 SIGLEC1Q9BZZ2 1709 aa29.97■■■□□ 2.39
PDLIM2-216ENST00000464275 REREQ9P2R6 1566 aa29.92■■■□□ 2.38
PDLIM2-216ENST00000464275 PPLO60437 1756 aa29.92■■■□□ 2.38
PDLIM2-216ENST00000464275 COL17A1Q9UMD9 1497 aaPredicted RBP29.92■■■□□ 2.38
PDLIM2-216ENST00000464275 ARHGAP31Q2M1Z3 1444 aa29.91■■■□□ 2.38
PDLIM2-216ENST00000464275 PIK3C2BO00750 1634 aa29.9■■■□□ 2.38
PDLIM2-216ENST00000464275 NOS1P29475 1434 aa29.9■■■□□ 2.38
PDLIM2-216ENST00000464275 TESK2Q96S53 571 aa29.87■■■□□ 2.37
PDLIM2-216ENST00000464275 SCAF11Q99590 1463 aaKnown RBP29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms