RNA–Protein interactions for RNA: ENST00000463875.6

GTDC1-212, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTDC1, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-212ENST00000463875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.61□□□□□ -0.55
GTDC1-212ENST00000463875 NLRP1Q9C000 1473 aa11.58□□□□□ -0.56
GTDC1-212ENST00000463875 ATP7AQ04656 1500 aa11.58□□□□□ -0.56
GTDC1-212ENST00000463875 FAM135AQ9P2D6 1515 aa11.58□□□□□ -0.56
GTDC1-212ENST00000463875 EEA1Q15075 1411 aa11.57□□□□□ -0.56
GTDC1-212ENST00000463875 IQGAP1P46940 1657 aa11.57□□□□□ -0.56
GTDC1-212ENST00000463875 PZPP20742 1482 aa11.56□□□□□ -0.56
GTDC1-212ENST00000463875 UGGT1Q9NYU2 1555 aa11.55□□□□□ -0.56
GTDC1-212ENST00000463875 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
GTDC1-212ENST00000463875 SETD1AO15047 1707 aaKnown RBP11.55□□□□□ -0.56
GTDC1-212ENST00000463875 PLEKHH2Q8IVE3 1493 aa11.55□□□□□ -0.56
GTDC1-212ENST00000463875 MIA2Q96PC5 1412 aa11.55□□□□□ -0.56
GTDC1-212ENST00000463875 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
GTDC1-212ENST00000463875 INO80Q9ULG1 1556 aaPredicted RBP11.54□□□□□ -0.56
GTDC1-212ENST00000463875 STRCP1A6NGW2 1772 aa11.54□□□□□ -0.56
GTDC1-212ENST00000463875 HNRNPMP52272 730 aaKnown RBP eCLIP11.53□□□□□ -0.56
GTDC1-212ENST00000463875 ZNF777Q9ULD5 760 aaPredicted RBP11.53□□□□□ -0.56
GTDC1-212ENST00000463875 SYCP2Q9BX26 1530 aa11.53□□□□□ -0.56
GTDC1-212ENST00000463875 KDM5DQ9BY66 1539 aa11.53□□□□□ -0.56
GTDC1-212ENST00000463875 ZNF772Q68DY9 489 aaPredicted RBP11.52□□□□□ -0.57
GTDC1-212ENST00000463875 ADGBQ8N7X0 1667 aa11.52□□□□□ -0.57
GTDC1-212ENST00000463875 CDC42BPAQ5VT25 1732 aa11.51□□□□□ -0.57
GTDC1-212ENST00000463875 CCDC18Q5T9S5 1454 aa11.5□□□□□ -0.57
GTDC1-212ENST00000463875 JCADQ9P266 1359 aa11.49□□□□□ -0.57
GTDC1-212ENST00000463875 DHX29Q7Z478 1369 aaKnown RBP11.48□□□□□ -0.57
GTDC1-212ENST00000463875 LRRC9Q6ZRR7 1453 aa11.48□□□□□ -0.57
GTDC1-212ENST00000463875 WASHC2CQ9Y4E1 1318 aa11.48□□□□□ -0.57
GTDC1-212ENST00000463875 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
GTDC1-212ENST00000463875 RTEL1-TNFRSF6BF6WH68 1400 aa11.47□□□□□ -0.57
GTDC1-212ENST00000463875 GPATCH8Q9UKJ3 1502 aaKnown RBP11.47□□□□□ -0.57
GTDC1-212ENST00000463875 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
GTDC1-212ENST00000463875 CDK12Q9NYV4 1490 aaPredicted RBP11.47□□□□□ -0.57
GTDC1-212ENST00000463875 CFDP1Q9UEE9 299 aaPredicted RBP11.46□□□□□ -0.57
GTDC1-212ENST00000463875 SPATA31A6Q5VVP1 1343 aa11.46□□□□□ -0.58
GTDC1-212ENST00000463875 ZC3H13Q5T200 1668 aaKnown RBP11.46□□□□□ -0.58
GTDC1-212ENST00000463875 RXRBP28702 533 aa11.45□□□□□ -0.58
GTDC1-212ENST00000463875 ROBO1Q9Y6N7 1651 aa11.45□□□□□ -0.58
GTDC1-212ENST00000463875 SCAF11Q99590 1463 aaKnown RBP11.45□□□□□ -0.58
GTDC1-212ENST00000463875 KIF3BO15066 747 aa11.45□□□□□ -0.58
GTDC1-212ENST00000463875 TRIM52Q96A61 297 aa11.45□□□□□ -0.58
GTDC1-212ENST00000463875 XIRP1Q702N8 1843 aaKnown RBP11.44□□□□□ -0.58
GTDC1-212ENST00000463875 LRRIQ1Q96JM4 1722 aa11.44□□□□□ -0.58
GTDC1-212ENST00000463875 TMEM94Q12767 1356 aa11.42□□□□□ -0.58
GTDC1-212ENST00000463875 MEX3CQ5U5Q3 659 aaKnown RBP11.42□□□□□ -0.58
GTDC1-212ENST00000463875 FGD6Q6ZV73 1430 aa11.42□□□□□ -0.58
GTDC1-212ENST00000463875 CASKIN1Q8WXD9 1431 aa11.42□□□□□ -0.58
GTDC1-212ENST00000463875 EID1Q9Y6B2 187 aa11.41□□□□□ -0.58
GTDC1-212ENST00000463875 CCNB3Q8WWL7 1395 aa11.4□□□□□ -0.58
GTDC1-212ENST00000463875 ARHGAP23Q9P227 1491 aa11.4□□□□□ -0.58
GTDC1-212ENST00000463875 UBTFP17480 764 aaKnown RBP11.4□□□□□ -0.58
GTDC1-212ENST00000463875 KCNA6P17658 529 aa11.4□□□□□ -0.58
GTDC1-212ENST00000463875 TXNDC2Q86VQ3 553 aa11.4□□□□□ -0.58
GTDC1-212ENST00000463875 SLAIN2Q9P270 581 aa11.4□□□□□ -0.58
GTDC1-212ENST00000463875 PHLPP1O60346 1717 aa11.39□□□□□ -0.59
GTDC1-212ENST00000463875 SLIT1O75093 1534 aa11.39□□□□□ -0.59
GTDC1-212ENST00000463875 ZRANB1Q9UGI0 708 aa11.39□□□□□ -0.59
GTDC1-212ENST00000463875 LTKP29376 864 aa11.38□□□□□ -0.59
GTDC1-212ENST00000463875 PROSER2Q86WR7 435 aaPredicted RBP11.38□□□□□ -0.59
GTDC1-212ENST00000463875 MBD5Q9P267 1494 aa11.38□□□□□ -0.59
GTDC1-212ENST00000463875 MSH6P52701 1360 aa11.37□□□□□ -0.59
GTDC1-212ENST00000463875 MAP3K1Q13233 1512 aa11.37□□□□□ -0.59
GTDC1-212ENST00000463875 LRP6O75581 1613 aa11.37□□□□□ -0.59
GTDC1-212ENST00000463875 RSPH4AQ5TD94 716 aa11.37□□□□□ -0.59
GTDC1-212ENST00000463875 ABCC3O15438 1527 aa11.36□□□□□ -0.59
GTDC1-212ENST00000463875 ERVK-7P63135 1459 aa11.36□□□□□ -0.59
GTDC1-212ENST00000463875 PRDM15P57071 1507 aaPredicted RBP11.36□□□□□ -0.59
GTDC1-212ENST00000463875 UBR1Q8IWV7 1749 aa11.36□□□□□ -0.59
GTDC1-212ENST00000463875 NKTRP30414 1462 aaKnown RBP11.35□□□□□ -0.59
GTDC1-212ENST00000463875 NCOA2Q15596 1464 aa11.35□□□□□ -0.59
GTDC1-212ENST00000463875 SRCAPQ6ZRS2 3230 aa11.35□□□□□ -0.59
GTDC1-212ENST00000463875 COL16A1Q07092 1604 aaPredicted RBP11.34□□□□□ -0.59
GTDC1-212ENST00000463875 FYCO1Q9BQS8 1478 aa11.34□□□□□ -0.59
GTDC1-212ENST00000463875 TIAM1Q13009 1591 aa11.32□□□□□ -0.6
GTDC1-212ENST00000463875 RBM6P78332 1123 aaKnown RBP11.32□□□□□ -0.6
GTDC1-212ENST00000463875 TMEM2Q9UHN6 1383 aa11.31□□□□□ -0.6
GTDC1-212ENST00000463875 ZNF644Q9H582 1327 aaPredicted RBP11.31□□□□□ -0.6
GTDC1-212ENST00000463875 CAMSAP2Q08AD1 1489 aa11.31□□□□□ -0.6
GTDC1-212ENST00000463875 CCDC141Q6ZP82 1450 aa11.31□□□□□ -0.6
GTDC1-212ENST00000463875 SHPRHQ149N8 1683 aa11.31□□□□□ -0.6
GTDC1-212ENST00000463875 ATAD2Q6PL18 1390 aa11.3□□□□□ -0.6
GTDC1-212ENST00000463875 NCOA3Q9Y6Q9 1424 aa11.3□□□□□ -0.6
GTDC1-212ENST00000463875 AFF2P51816 1311 aa11.3□□□□□ -0.6
GTDC1-212ENST00000463875 NUTM2BA6NNL0 878 aaPredicted RBP11.29□□□□□ -0.6
GTDC1-212ENST00000463875 NUTM2EB1AL46 878 aaPredicted RBP11.29□□□□□ -0.6
GTDC1-212ENST00000463875 NUTM2DQ5VT03 806 aaPredicted RBP11.29□□□□□ -0.6
GTDC1-212ENST00000463875 CCDC125Q86Z20 511 aa11.29□□□□□ -0.6
GTDC1-212ENST00000463875 NUTM2AQ8IVF1 878 aaPredicted RBP11.29□□□□□ -0.6
GTDC1-212ENST00000463875 RGS12O14924 1447 aa11.29□□□□□ -0.6
GTDC1-212ENST00000463875 NWD1Q149M9 1564 aa11.28□□□□□ -0.6
GTDC1-212ENST00000463875 NGLY1Q96IV0 654 aa11.28□□□□□ -0.6
GTDC1-212ENST00000463875 AHDC1Q5TGY3 1603 aaPredicted RBP11.28□□□□□ -0.6
GTDC1-212ENST00000463875 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
GTDC1-212ENST00000463875 QTRT2Q9H974 415 aaKnown RBP11.28□□□□□ -0.6
GTDC1-212ENST00000463875 TET3O43151 1660 aa11.28□□□□□ -0.6
GTDC1-212ENST00000463875 MTUS2Q5JR59 1369 aa11.27□□□□□ -0.6
GTDC1-212ENST00000463875 ARHGAP31Q2M1Z3 1444 aa11.27□□□□□ -0.61
GTDC1-212ENST00000463875 TSPY4P0CV99 314 aa11.27□□□□□ -0.61
GTDC1-212ENST00000463875 TSPY10P0CW01 314 aa11.27□□□□□ -0.61
GTDC1-212ENST00000463875 STAG3Q9UJ98 1225 aa11.27□□□□□ -0.61
GTDC1-212ENST00000463875 CADPS2Q86UW7 1296 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms