RNA–Protein interactions for RNA: ENST00000462993.1

SNX10-208, Transcript of sorting nexin 10, humanhuman

TSL 1 (best)

Gene SNX10, Length 806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX10-208ENST00000462993 IFFO2Q5TF58 517 aa9.73□□□□□ -0.85
SNX10-208ENST00000462993 GTPBP6O43824 516 aaPredicted RBP9.72□□□□□ -0.85
SNX10-208ENST00000462993 PROX2Q3B8N5 592 aa9.72□□□□□ -0.85
SNX10-208ENST00000462993 RGS20O76081 388 aa9.71□□□□□ -0.86
SNX10-208ENST00000462993 EMILIN3Q9NT22 766 aa9.7□□□□□ -0.86
SNX10-208ENST00000462993 PCDHGA10Q9Y5H3 936 aa9.7□□□□□ -0.86
SNX10-208ENST00000462993 PPP1R3GB7ZBB8 358 aa9.69□□□□□ -0.86
SNX10-208ENST00000462993 COL9A1P20849 921 aa9.69□□□□□ -0.86
SNX10-208ENST00000462993 ANKK1Q8NFD2 765 aa9.68□□□□□ -0.86
SNX10-208ENST00000462993 BCAMP50895 628 aa9.67□□□□□ -0.86
SNX10-208ENST00000462993 RABGEF1Q9UJ41 708 aa9.67□□□□□ -0.86
SNX10-208ENST00000462993 MFSD10Q14728 455 aa9.66□□□□□ -0.86
SNX10-208ENST00000462993 TSHZ2Q9NRE2 1034 aa9.65□□□□□ -0.86
SNX10-208ENST00000462993 TYW1BQ6NUM6 668 aa9.64□□□□□ -0.87
SNX10-208ENST00000462993 KIAA1468Q9P260 1216 aa9.64□□□□□ -0.87
SNX10-208ENST00000462993 KDM2AQ9Y2K7 1162 aa9.63□□□□□ -0.87
SNX10-208ENST00000462993 PHF14O94880 888 aa9.61□□□□□ -0.87
SNX10-208ENST00000462993 CADPS2Q86UW7 1296 aa9.61□□□□□ -0.87
SNX10-208ENST00000462993 FBXW7Q969H0 707 aa9.61□□□□□ -0.87
SNX10-208ENST00000462993 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
SNX10-208ENST00000462993 SOWAHBA6NEL2 793 aa9.6□□□□□ -0.87
SNX10-208ENST00000462993 ZFRQ96KR1 1074 aaKnown RBP9.6□□□□□ -0.87
SNX10-208ENST00000462993 WBP1LQ9NX94 342 aa9.6□□□□□ -0.87
SNX10-208ENST00000462993 ITGBL1O95965 494 aaPredicted RBP9.59□□□□□ -0.87
SNX10-208ENST00000462993 C6orf132Q5T0Z8 1188 aa9.58□□□□□ -0.88
SNX10-208ENST00000462993 LAPTM4BQ86VI4 370 aa9.58□□□□□ -0.88
SNX10-208ENST00000462993 RBM33Q96EV2 1170 aaKnown RBP9.58□□□□□ -0.88
SNX10-208ENST00000462993 DPYSL4O14531 572 aa9.56□□□□□ -0.88
SNX10-208ENST00000462993 KCNC4Q03721 635 aa9.55□□□□□ -0.88
SNX10-208ENST00000462993 Q6ZNB5 142 aa9.55□□□□□ -0.88
SNX10-208ENST00000462993 DDX12PQ92771 950 aa9.54□□□□□ -0.88
SNX10-208ENST00000462993 EPAS1Q99814 870 aa9.54□□□□□ -0.88
SNX10-208ENST00000462993 TRIM6-TRIM34B2RNG4 842 aa9.53□□□□□ -0.88
SNX10-208ENST00000462993 NYAP1Q6ZVC0 841 aa9.53□□□□□ -0.88
SNX10-208ENST00000462993 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.52□□□□□ -0.89
SNX10-208ENST00000462993 HPS5Q9UPZ3 1129 aa9.52□□□□□ -0.89
SNX10-208ENST00000462993 ONECUT3O60422 494 aaPredicted RBP9.51□□□□□ -0.89
SNX10-208ENST00000462993 FAM98CQ17RN3 349 aaKnown RBP9.51□□□□□ -0.89
SNX10-208ENST00000462993 LRCH3Q96II8 777 aa9.5□□□□□ -0.89
SNX10-208ENST00000462993 TSR3Q9UJK0 312 aaKnown RBP9.5□□□□□ -0.89
SNX10-208ENST00000462993 CAMK2BQ13554 666 aa9.49□□□□□ -0.89
SNX10-208ENST00000462993 BCANQ96GW7 911 aa9.48□□□□□ -0.89
SNX10-208ENST00000462993 MAP3K7O43318 606 aa9.46□□□□□ -0.9
SNX10-208ENST00000462993 NBR1Q14596 966 aa9.46□□□□□ -0.9
SNX10-208ENST00000462993 TSR1Q2NL82 804 aaKnown RBP9.46□□□□□ -0.9
SNX10-208ENST00000462993 PACS2Q86VP3 889 aa9.45□□□□□ -0.9
SNX10-208ENST00000462993 TSKSQ9UJT2 592 aa9.45□□□□□ -0.9
SNX10-208ENST00000462993 SMAPO00193 183 aa9.44□□□□□ -0.9
SNX10-208ENST00000462993 PPP4CP60510 307 aa9.44□□□□□ -0.9
SNX10-208ENST00000462993 EN1Q05925 392 aaPredicted RBP9.41□□□□□ -0.9
SNX10-208ENST00000462993 GFRA3O60609 400 aa9.4□□□□□ -0.9
SNX10-208ENST00000462993 SAMD7Q7Z3H4 446 aa9.4□□□□□ -0.9
SNX10-208ENST00000462993 NISCHQ9Y2I1 1504 aa9.38□□□□□ -0.91
SNX10-208ENST00000462993 CDCA7LQ96GN5 454 aa9.38□□□□□ -0.91
SNX10-208ENST00000462993 LAPTM4AQ15012 233 aa9.37□□□□□ -0.91
SNX10-208ENST00000462993 TJAP1Q5JTD0 557 aa9.37□□□□□ -0.91
SNX10-208ENST00000462993 PRKD2Q9BZL6 878 aa9.37□□□□□ -0.91
SNX10-208ENST00000462993 LCE2BO14633 110 aa9.36□□□□□ -0.91
SNX10-208ENST00000462993 PDIA6Q15084 440 aa9.36□□□□□ -0.91
SNX10-208ENST00000462993 TRAF7Q6Q0C0 670 aa9.36□□□□□ -0.91
SNX10-208ENST00000462993 FAM198AQ9UFP1 575 aa9.36□□□□□ -0.91
SNX10-208ENST00000462993 C3orf80F5H4A9 247 aa9.35□□□□□ -0.91
SNX10-208ENST00000462993 RNF40O75150 1001 aa9.35□□□□□ -0.91
SNX10-208ENST00000462993 PRSS12P56730 875 aa9.35□□□□□ -0.91
SNX10-208ENST00000462993 MTRQ99707 1265 aa9.35□□□□□ -0.91
SNX10-208ENST00000462993 GRXCR2A6NFK2 248 aa9.34□□□□□ -0.91
SNX10-208ENST00000462993 PRIM1P49642 420 aaKnown RBP9.34□□□□□ -0.91
SNX10-208ENST00000462993 PNMA3Q9UL41 463 aa9.34□□□□□ -0.91
SNX10-208ENST00000462993 PPP1R18Q6NYC8 613 aa9.33□□□□□ -0.92
SNX10-208ENST00000462993 TATDN2Q93075 761 aa9.33□□□□□ -0.92
SNX10-208ENST00000462993 SPDYE16A6NNV3 312 aaPredicted RBP9.32□□□□□ -0.92
SNX10-208ENST00000462993 ZNF516Q92618 1163 aa9.32□□□□□ -0.92
SNX10-208ENST00000462993 IL21Q9HBE4 155 aa9.32□□□□□ -0.92
SNX10-208ENST00000462993 NBPF26B4DH59 902 aa9.3□□□□□ -0.92
SNX10-208ENST00000462993 NUDT18Q6ZVK8 323 aa9.29□□□□□ -0.92
SNX10-208ENST00000462993 CERKQ8TCT0 537 aa9.29□□□□□ -0.92
SNX10-208ENST00000462993 APLP1P51693 650 aa9.28□□□□□ -0.92
SNX10-208ENST00000462993 HDGFP51858 240 aaKnown RBP9.28□□□□□ -0.92
SNX10-208ENST00000462993 NKX2-3Q8TAU0 364 aa9.28□□□□□ -0.92
SNX10-208ENST00000462993 CDHR5Q9HBB8 845 aa9.28□□□□□ -0.92
SNX10-208ENST00000462993 NRG2O14511 850 aaPredicted RBP9.27□□□□□ -0.93
SNX10-208ENST00000462993 E2F4Q16254 413 aa9.27□□□□□ -0.93
SNX10-208ENST00000462993 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.27□□□□□ -0.93
SNX10-208ENST00000462993 WDR70Q9NW82 654 aa9.27□□□□□ -0.93
SNX10-208ENST00000462993 COPS2P61201 443 aa9.25□□□□□ -0.93
SNX10-208ENST00000462993 V9GY48 417 aaPredicted RBP9.25□□□□□ -0.93
SNX10-208ENST00000462993 PDZRN3Q9UPQ7 1066 aa9.24□□□□□ -0.93
SNX10-208ENST00000462993 OSBPP22059 807 aa9.23□□□□□ -0.93
SNX10-208ENST00000462993 SWT1Q5T5J6 900 aaKnown RBP9.22□□□□□ -0.93
SNX10-208ENST00000462993 P3H3Q8IVL6 736 aa9.21□□□□□ -0.94
SNX10-208ENST00000462993 ZNF787Q6DD87 383 aa9.2□□□□□ -0.94
SNX10-208ENST00000462993 PRKCSHP14314 528 aaPredicted RBP9.19□□□□□ -0.94
SNX10-208ENST00000462993 GGCXP38435 758 aa9.19□□□□□ -0.94
SNX10-208ENST00000462993 PADI6Q6TGC4 694 aa9.19□□□□□ -0.94
SNX10-208ENST00000462993 SLF2Q8IX21 1173 aa9.17□□□□□ -0.94
SNX10-208ENST00000462993 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
SNX10-208ENST00000462993 RBM27Q9P2N5 1060 aaKnown RBP9.17□□□□□ -0.94
SNX10-208ENST00000462993 ARIH1Q9Y4X5 557 aaPredicted RBP9.17□□□□□ -0.94
SNX10-208ENST00000462993 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.94
SNX10-208ENST00000462993 TTC13Q8NBP0 860 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms