RNA–Protein interactions for RNA: ENST00000462852.5

VPS45-205, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-205ENST00000462852 NUP153P49790 1475 aaKnown RBP13.41□□□□□ -0.26
VPS45-205ENST00000462852 MAGI3Q5TCQ9 1506 aa13.4□□□□□ -0.26
VPS45-205ENST00000462852 ADCY10Q96PN6 1610 aa13.4□□□□□ -0.26
VPS45-205ENST00000462852 SLAIN1Q8ND83 568 aa13.39□□□□□ -0.27
VPS45-205ENST00000462852 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
VPS45-205ENST00000462852 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
VPS45-205ENST00000462852 TAOK2Q9UL54 1235 aa13.38□□□□□ -0.27
VPS45-205ENST00000462852 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
VPS45-205ENST00000462852 KDM6BO15054 1643 aa13.36□□□□□ -0.27
VPS45-205ENST00000462852 CDK13Q14004 1512 aaKnown RBP13.36□□□□□ -0.27
VPS45-205ENST00000462852 RANGAP1P46060 587 aaPredicted RBP13.36□□□□□ -0.27
VPS45-205ENST00000462852 CARMIL2Q6F5E8 1435 aa13.36□□□□□ -0.27
VPS45-205ENST00000462852 EPRSP07814 1512 aaKnown RBP13.35□□□□□ -0.27
VPS45-205ENST00000462852 STK24Q9Y6E0 443 aa13.35□□□□□ -0.27
VPS45-205ENST00000462852 PTPRGP23470 1445 aa13.35□□□□□ -0.27
VPS45-205ENST00000462852 STK25O00506 426 aa13.34□□□□□ -0.27
VPS45-205ENST00000462852 SOX12O15370 315 aa13.34□□□□□ -0.27
VPS45-205ENST00000462852 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.34□□□□□ -0.27
VPS45-205ENST00000462852 CCDC18Q5T9S5 1454 aa13.34□□□□□ -0.27
VPS45-205ENST00000462852 ABCC2Q92887 1545 aa13.34□□□□□ -0.27
VPS45-205ENST00000462852 LCE2DQ5TA82 110 aaPredicted RBP13.33□□□□□ -0.28
VPS45-205ENST00000462852 EHBP1L1Q8N3D4 1523 aa13.33□□□□□ -0.28
VPS45-205ENST00000462852 MS4A4AQ96JQ5 239 aa13.32□□□□□ -0.28
VPS45-205ENST00000462852 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
VPS45-205ENST00000462852 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
VPS45-205ENST00000462852 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
VPS45-205ENST00000462852 P3H3Q8IVL6 736 aa13.31□□□□□ -0.28
VPS45-205ENST00000462852 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
VPS45-205ENST00000462852 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
VPS45-205ENST00000462852 ZCCHC11Q5TAX3 1644 aaKnown RBP13.29□□□□□ -0.28
VPS45-205ENST00000462852 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
VPS45-205ENST00000462852 FAM163AQ96GL9 167 aaPredicted RBP13.28□□□□□ -0.28
VPS45-205ENST00000462852 TTBK1Q5TCY1 1321 aaPredicted RBP13.27□□□□□ -0.29
VPS45-205ENST00000462852 TSPOAP1O95153 1857 aa13.27□□□□□ -0.29
VPS45-205ENST00000462852 KIF14Q15058 1648 aa13.26□□□□□ -0.29
VPS45-205ENST00000462852 ASXL2Q76L83 1435 aa13.26□□□□□ -0.29
VPS45-205ENST00000462852 TMEM121BQ9BXQ6 578 aaPredicted RBP13.26□□□□□ -0.29
VPS45-205ENST00000462852 SUPT6HQ7KZ85 1726 aaKnown RBP13.25□□□□□ -0.29
VPS45-205ENST00000462852 KDM5BQ9UGL1 1544 aa13.25□□□□□ -0.29
VPS45-205ENST00000462852 FBXO22Q8NEZ5 403 aa13.25□□□□□ -0.29
VPS45-205ENST00000462852 GLI2P10070 1586 aa13.24□□□□□ -0.29
VPS45-205ENST00000462852 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
VPS45-205ENST00000462852 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
VPS45-205ENST00000462852 ATP10BO94823 1461 aa13.23□□□□□ -0.29
VPS45-205ENST00000462852 G3V3G9 751 aa13.23□□□□□ -0.29
VPS45-205ENST00000462852 NLRP6P59044 892 aa13.22□□□□□ -0.29
VPS45-205ENST00000462852 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
VPS45-205ENST00000462852 POTEMA6NI47 508 aa13.21□□□□□ -0.29
VPS45-205ENST00000462852 POTEGQ6S5H5 508 aa13.21□□□□□ -0.29
VPS45-205ENST00000462852 MICALL2Q8IY33 904 aa13.2□□□□□ -0.3
VPS45-205ENST00000462852 TEX14Q8IWB6 1497 aa13.19□□□□□ -0.3
VPS45-205ENST00000462852 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
VPS45-205ENST00000462852 NCOA2Q15596 1464 aa13.18□□□□□ -0.3
VPS45-205ENST00000462852 RRBP1Q9P2E9 1410 aaKnown RBP13.18□□□□□ -0.3
VPS45-205ENST00000462852 TTC37Q6PGP7 1564 aa13.18□□□□□ -0.3
VPS45-205ENST00000462852 TROQ12816 1431 aaPredicted RBP13.17□□□□□ -0.3
VPS45-205ENST00000462852 HS6ST3Q8IZP7 471 aa13.17□□□□□ -0.3
VPS45-205ENST00000462852 PPRC1Q5VV67 1664 aaKnown RBP13.17□□□□□ -0.3
VPS45-205ENST00000462852 PHLDB1Q86UU1 1377 aa13.17□□□□□ -0.3
VPS45-205ENST00000462852 ADGRL1O94910 1474 aa13.16□□□□□ -0.3
VPS45-205ENST00000462852 ITSN2Q9NZM3 1697 aa13.16□□□□□ -0.3
VPS45-205ENST00000462852 ST18O60284 1047 aa13.16□□□□□ -0.3
VPS45-205ENST00000462852 PREX2Q70Z35 1606 aa13.16□□□□□ -0.3
VPS45-205ENST00000462852 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
VPS45-205ENST00000462852 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
VPS45-205ENST00000462852 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
VPS45-205ENST00000462852 SNPHO15079 494 aa13.12□□□□□ -0.31
VPS45-205ENST00000462852 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
VPS45-205ENST00000462852 TCOF1Q13428 1488 aaKnown RBP13.11□□□□□ -0.31
VPS45-205ENST00000462852 WDR7Q9Y4E6 1490 aa13.11□□□□□ -0.31
VPS45-205ENST00000462852 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
VPS45-205ENST00000462852 CHGAP10645 457 aaKnown RBP13.11□□□□□ -0.31
VPS45-205ENST00000462852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.31
VPS45-205ENST00000462852 ABCA9Q8IUA7 1624 aa13.1□□□□□ -0.31
VPS45-205ENST00000462852 MTUS2Q5JR59 1369 aa13.1□□□□□ -0.31
VPS45-205ENST00000462852 CROCC2H7BZ55 1655 aa13.1□□□□□ -0.31
VPS45-205ENST00000462852 MYOM3Q5VTT5 1437 aa13.1□□□□□ -0.31
VPS45-205ENST00000462852 MYO5CQ9NQX4 1742 aa13.1□□□□□ -0.31
VPS45-205ENST00000462852 PTPN23Q9H3S7 1636 aa13.1□□□□□ -0.31
VPS45-205ENST00000462852 FGD6Q6ZV73 1430 aa13.09□□□□□ -0.31
VPS45-205ENST00000462852 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
VPS45-205ENST00000462852 SAMD9LQ8IVG5 1584 aa13.06□□□□□ -0.32
VPS45-205ENST00000462852 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
VPS45-205ENST00000462852 ARID3CA6NKF2 412 aa13.05□□□□□ -0.32
VPS45-205ENST00000462852 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
VPS45-205ENST00000462852 DNMT1P26358 1616 aaKnown RBP13.05□□□□□ -0.32
VPS45-205ENST00000462852 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
VPS45-205ENST00000462852 PPP1R37O75864 691 aa13.04□□□□□ -0.32
VPS45-205ENST00000462852 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
VPS45-205ENST00000462852 CCNB3Q8WWL7 1395 aa13.03□□□□□ -0.32
VPS45-205ENST00000462852 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
VPS45-205ENST00000462852 HECW2Q9P2P5 1572 aa13.03□□□□□ -0.32
VPS45-205ENST00000462852 KCNH8Q96L42 1107 aa13.02□□□□□ -0.33
VPS45-205ENST00000462852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.02□□□□□ -0.33
VPS45-205ENST00000462852 CAMSAP2Q08AD1 1489 aa13.01□□□□□ -0.33
VPS45-205ENST00000462852 GCC2Q8IWJ2 1684 aa13□□□□□ -0.33
VPS45-205ENST00000462852 ABCC1P33527 1531 aa13□□□□□ -0.33
VPS45-205ENST00000462852 TRIM26Q12899 539 aaPredicted RBP13□□□□□ -0.33
VPS45-205ENST00000462852 ATP1B4Q9UN42 357 aaPredicted RBP13□□□□□ -0.33
VPS45-205ENST00000462852 ARHGEF5Q12774 1597 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms