RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 MYT1LQ9UL68 1186 aa20.74■□□□□ 0.91
HDAC6-213ENST00000462730 TSPOAP1O95153 1857 aa20.73■□□□□ 0.91
HDAC6-213ENST00000462730 KIF13AQ9H1H9 1805 aa20.73■□□□□ 0.91
HDAC6-213ENST00000462730 RICTORQ6R327 1708 aa20.72■□□□□ 0.91
HDAC6-213ENST00000462730 RPRD2Q5VT52 1461 aaKnown RBP20.71■□□□□ 0.91
HDAC6-213ENST00000462730 EIF2AK4Q9P2K8 1649 aaKnown RBP20.71■□□□□ 0.91
HDAC6-213ENST00000462730 MLH3Q9UHC1 1453 aa20.71■□□□□ 0.91
HDAC6-213ENST00000462730 DEPDC5O75140 1603 aa20.71■□□□□ 0.91
HDAC6-213ENST00000462730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.68■□□□□ 0.92e-7■■□□□ 14
HDAC6-213ENST00000462730 ABCA6Q8N139 1617 aa20.68■□□□□ 0.9
HDAC6-213ENST00000462730 DHX29Q7Z478 1369 aaKnown RBP20.67■□□□□ 0.9
HDAC6-213ENST00000462730 TEX14Q8IWB6 1497 aa20.67■□□□□ 0.9
HDAC6-213ENST00000462730 FRMPD1Q5SYB0 1578 aa20.66■□□□□ 0.9
HDAC6-213ENST00000462730 RAPGEF3O95398 923 aa20.66■□□□□ 0.9
HDAC6-213ENST00000462730 A2MP01023 1474 aa20.64■□□□□ 0.89
HDAC6-213ENST00000462730 PRDM15P57071 1507 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-213ENST00000462730 L3MBTL2Q969R5 705 aa20.63■□□□□ 0.89
HDAC6-213ENST00000462730 MROH1Q8NDA8 1641 aa20.63■□□□□ 0.89
HDAC6-213ENST00000462730 DIP2CQ9Y2E4 1556 aa20.62■□□□□ 0.89
HDAC6-213ENST00000462730 CENPBP07199 599 aaPredicted RBP20.61■□□□□ 0.89
HDAC6-213ENST00000462730 VWDEQ8N2E2 1590 aa20.6■□□□□ 0.89
HDAC6-213ENST00000462730 MIER1Q8N108 512 aa20.6■□□□□ 0.89
HDAC6-213ENST00000462730 ZMYM4Q5VZL5 1548 aa20.6■□□□□ 0.89
HDAC6-213ENST00000462730 KIF3BO15066 747 aa20.59■□□□□ 0.89
HDAC6-213ENST00000462730 RNF17Q9BXT8 1623 aaKnown RBP20.59■□□□□ 0.89
HDAC6-213ENST00000462730 BCORL1Q5H9F3 1711 aa20.58■□□□□ 0.88
HDAC6-213ENST00000462730 E9PCH4 1651 aa20.58■□□□□ 0.88
HDAC6-213ENST00000462730 TET3O43151 1660 aa20.57■□□□□ 0.88
HDAC6-213ENST00000462730 YEATS2Q9ULM3 1422 aa20.55■□□□□ 0.88
HDAC6-213ENST00000462730 KANK1Q14678 1352 aa20.55■□□□□ 0.88
HDAC6-213ENST00000462730 HIRIP3Q9BW71 556 aaPredicted RBP20.54■□□□□ 0.88
HDAC6-213ENST00000462730 PLA2R1Q13018 1463 aa20.54■□□□□ 0.88
HDAC6-213ENST00000462730 CCDC144AA2RUR9 1427 aa20.53■□□□□ 0.88
HDAC6-213ENST00000462730 ATP10AO60312 1499 aa20.52■□□□□ 0.88
HDAC6-213ENST00000462730 CEP152O94986 1710 aa20.51■□□□□ 0.87
HDAC6-213ENST00000462730 SPHKAPQ2M3C7 1700 aa20.5■□□□□ 0.87
HDAC6-213ENST00000462730 EFCAB6Q5THR3 1501 aa20.49■□□□□ 0.87
HDAC6-213ENST00000462730 NBPF8Q3BBV2 869 aa20.49■□□□□ 0.87
HDAC6-213ENST00000462730 GTF3C3Q9Y5Q9 886 aa20.48■□□□□ 0.87
HDAC6-213ENST00000462730 LMTK2Q8IWU2 1503 aa20.48■□□□□ 0.87
HDAC6-213ENST00000462730 TRPM2O94759 1503 aa20.47■□□□□ 0.87
HDAC6-213ENST00000462730 COL17A1Q9UMD9 1497 aaPredicted RBP20.47■□□□□ 0.87
HDAC6-213ENST00000462730 HSPA5P11021 654 aaKnown RBP20.45■□□□□ 0.86
HDAC6-213ENST00000462730 DDX10Q13206 875 aaKnown RBP20.43■□□□□ 0.86
HDAC6-213ENST00000462730 GGT6Q6P531 493 aa20.43■□□□□ 0.86
HDAC6-213ENST00000462730 PTPRTO14522 1441 aa20.43■□□□□ 0.86
HDAC6-213ENST00000462730 EIF4G2P78344 907 aaKnown RBP eCLIP20.43■□□□□ 0.86
HDAC6-213ENST00000462730 ABCC3O15438 1527 aa20.42■□□□□ 0.86
HDAC6-213ENST00000462730 REREQ9P2R6 1566 aa20.42■□□□□ 0.86
HDAC6-213ENST00000462730 ARHGEF40Q8TER5 1519 aa20.42■□□□□ 0.86
HDAC6-213ENST00000462730 CLTCL1P53675 1640 aa20.41■□□□□ 0.86
HDAC6-213ENST00000462730 ZC3H13Q5T200 1668 aaKnown RBP20.4■□□□□ 0.86
HDAC6-213ENST00000462730 CAMSAP1Q5T5Y3 1602 aa20.4■□□□□ 0.86
HDAC6-213ENST00000462730 ZNF326Q5BKZ1 582 aaKnown RBP20.38■□□□□ 0.85
HDAC6-213ENST00000462730 UHRF1BP1Q6BDS2 1440 aa20.38■□□□□ 0.85
HDAC6-213ENST00000462730 SIGLEC1Q9BZZ2 1709 aa20.37■□□□□ 0.85
HDAC6-213ENST00000462730 DNAJC5Q9H3Z4 198 aa20.37■□□□□ 0.85
HDAC6-213ENST00000462730 NPATQ14207 1427 aa20.37■□□□□ 0.85
HDAC6-213ENST00000462730 WASHC2CQ9Y4E1 1318 aa20.36■□□□□ 0.85
HDAC6-213ENST00000462730 SPATA31E1Q6ZUB1 1445 aa20.35■□□□□ 0.85
HDAC6-213ENST00000462730 DCAF11Q8TEB1 546 aa20.35■□□□□ 0.85
HDAC6-213ENST00000462730 AGLP35573 1532 aa20.35■□□□□ 0.85
HDAC6-213ENST00000462730 UGGT1Q9NYU2 1555 aa20.35■□□□□ 0.85
HDAC6-213ENST00000462730 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
HDAC6-213ENST00000462730 RALGAPBQ86X10 1494 aa20.33■□□□□ 0.84
HDAC6-213ENST00000462730 YTHDC1Q96MU7 727 aaKnown RBP20.32■□□□□ 0.84
HDAC6-213ENST00000462730 KDM2AQ9Y2K7 1162 aa20.32■□□□□ 0.84
HDAC6-213ENST00000462730 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
HDAC6-213ENST00000462730 PRAG1Q86YV5 1406 aa20.3■□□□□ 0.84
HDAC6-213ENST00000462730 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
HDAC6-213ENST00000462730 CFAP65Q6ZU64 1925 aaKnown RBP20.29■□□□□ 0.84
HDAC6-213ENST00000462730 WASHC2AQ641Q2 1341 aa20.29■□□□□ 0.84
HDAC6-213ENST00000462730 KIF1BO60333 1816 aa20.29■□□□□ 0.84
HDAC6-213ENST00000462730 TRPM1Q7Z4N2 1603 aa20.28■□□□□ 0.84
HDAC6-213ENST00000462730 CNTLNQ9NXG0 1405 aa20.28■□□□□ 0.84
HDAC6-213ENST00000462730 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.84
HDAC6-213ENST00000462730 MROH2AA6NES4 1674 aa20.27■□□□□ 0.84
HDAC6-213ENST00000462730 USP47Q96K76 1375 aa20.26■□□□□ 0.83
HDAC6-213ENST00000462730 SYNMO15061 1565 aa20.25■□□□□ 0.83
HDAC6-213ENST00000462730 NOS1P29475 1434 aa20.25■□□□□ 0.83
HDAC6-213ENST00000462730 CCDC7Q96M83 1385 aa20.24■□□□□ 0.83
HDAC6-213ENST00000462730 ADGRB3O60242 1522 aa20.23■□□□□ 0.83
HDAC6-213ENST00000462730 CLTCQ00610 1675 aaKnown RBP20.23■□□□□ 0.83
HDAC6-213ENST00000462730 MADDQ8WXG6 1647 aa20.23■□□□□ 0.83
HDAC6-213ENST00000462730 PREX1Q8TCU6 1659 aa20.23■□□□□ 0.83
HDAC6-213ENST00000462730 C11orf95C9JLR9 678 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-213ENST00000462730 PIK3C2BO00750 1634 aa20.23■□□□□ 0.83
HDAC6-213ENST00000462730 CARD11Q9BXL7 1154 aa20.22■□□□□ 0.83
HDAC6-213ENST00000462730 POLR1AO95602 1720 aaPredicted RBP20.21■□□□□ 0.83
HDAC6-213ENST00000462730 IFT172Q9UG01 1749 aa20.21■□□□□ 0.83
HDAC6-213ENST00000462730 ANP32CO43423 234 aa20.21■□□□□ 0.83
HDAC6-213ENST00000462730 ROCK2O75116 1388 aaKnown RBP20.2■□□□□ 0.82
HDAC6-213ENST00000462730 MLECQ14165 292 aa20.18■□□□□ 0.82
HDAC6-213ENST00000462730 PPP6R1Q9UPN7 881 aa20.18■□□□□ 0.82
HDAC6-213ENST00000462730 KIF7Q2M1P5 1343 aa20.18■□□□□ 0.82
HDAC6-213ENST00000462730 LAMC1P11047 1609 aa20.17■□□□□ 0.82
HDAC6-213ENST00000462730 MYOM2P54296 1465 aa20.16■□□□□ 0.82
HDAC6-213ENST00000462730 GPRASP1Q5JY77 1395 aa20.15■□□□□ 0.82
HDAC6-213ENST00000462730 ERVK-7P63135 1459 aa20.15■□□□□ 0.82
HDAC6-213ENST00000462730 STAC3Q96MF2 364 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 418.7 ms