RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 WASHC2CQ9Y4E1 1318 aa20.46■□□□□ 0.87
LRRC47-202ENST00000462356 ANKRD30AQ9BXX3 1397 aa20.46■□□□□ 0.87
LRRC47-202ENST00000462356 MROH2AA6NES4 1674 aa20.45■□□□□ 0.86
LRRC47-202ENST00000462356 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
LRRC47-202ENST00000462356 NCOA1Q15788 1441 aa20.44■□□□□ 0.86
LRRC47-202ENST00000462356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.861e-6■■□□□ 13.9
LRRC47-202ENST00000462356 EIF2AK4Q9P2K8 1649 aaKnown RBP20.42■□□□□ 0.86
LRRC47-202ENST00000462356 PREX1Q8TCU6 1659 aa20.42■□□□□ 0.86
LRRC47-202ENST00000462356 FBXO31Q5XUX0 539 aaPredicted RBP20.4■□□□□ 0.86
LRRC47-202ENST00000462356 RNF17Q9BXT8 1623 aaKnown RBP20.4■□□□□ 0.86
LRRC47-202ENST00000462356 KDM5DQ9BY66 1539 aa20.4■□□□□ 0.86
LRRC47-202ENST00000462356 MROH1Q8NDA8 1641 aa20.39■□□□□ 0.86
LRRC47-202ENST00000462356 ADGRL2O95490 1459 aa20.39■□□□□ 0.85
LRRC47-202ENST00000462356 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.85
LRRC47-202ENST00000462356 ERBINQ96RT1 1412 aa20.38■□□□□ 0.85
LRRC47-202ENST00000462356 SETD1BQ9UPS6 1966 aaKnown RBP20.38■□□□□ 0.85
LRRC47-202ENST00000462356 CEP152O94986 1710 aa20.36■□□□□ 0.85
LRRC47-202ENST00000462356 ABCC3O15438 1527 aa20.35■□□□□ 0.85
LRRC47-202ENST00000462356 NPATQ14207 1427 aa20.35■□□□□ 0.85
LRRC47-202ENST00000462356 RRBP1Q9P2E9 1410 aaKnown RBP20.35■□□□□ 0.85
LRRC47-202ENST00000462356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.34■□□□□ 0.85
LRRC47-202ENST00000462356 ANKRD50Q9ULJ7 1429 aa20.32■□□□□ 0.84
LRRC47-202ENST00000462356 PZPP20742 1482 aa20.31■□□□□ 0.84
LRRC47-202ENST00000462356 CFAP65Q6ZU64 1925 aaKnown RBP20.3■□□□□ 0.84
LRRC47-202ENST00000462356 PRDM15P57071 1507 aaPredicted RBP20.3■□□□□ 0.84
LRRC47-202ENST00000462356 FAM135AQ9P2D6 1515 aa20.3■□□□□ 0.84
LRRC47-202ENST00000462356 ZC3H13Q5T200 1668 aaKnown RBP20.29■□□□□ 0.84
LRRC47-202ENST00000462356 DEPDC5O75140 1603 aa20.29■□□□□ 0.84
LRRC47-202ENST00000462356 CAMSAP1Q5T5Y3 1602 aa20.29■□□□□ 0.84
LRRC47-202ENST00000462356 MYO3AQ8NEV4 1616 aa20.29■□□□□ 0.84
LRRC47-202ENST00000462356 ROCK1Q13464 1354 aa20.28■□□□□ 0.84
LRRC47-202ENST00000462356 KANK1Q14678 1352 aa20.28■□□□□ 0.84
LRRC47-202ENST00000462356 TNRQ92752 1358 aa20.28■□□□□ 0.84
LRRC47-202ENST00000462356 CEP170BQ9Y4F5 1589 aaPredicted RBP20.24■□□□□ 0.83
LRRC47-202ENST00000462356 STRCQ7RTU9 1775 aa20.23■□□□□ 0.83
LRRC47-202ENST00000462356 VWDEQ8N2E2 1590 aa20.22■□□□□ 0.83
LRRC47-202ENST00000462356 ERVK-7P63135 1459 aa20.22■□□□□ 0.83
LRRC47-202ENST00000462356 ZNF142P52746 1687 aaPredicted RBP20.22■□□□□ 0.83
LRRC47-202ENST00000462356 A2ML1A8K2U0 1454 aa20.21■□□□□ 0.83
LRRC47-202ENST00000462356 NCKAP5LQ9HCH0 1330 aa20.21■□□□□ 0.83
LRRC47-202ENST00000462356 SPATA31D1Q6ZQQ2 1576 aa20.2■□□□□ 0.82
LRRC47-202ENST00000462356 ARHGAP31Q2M1Z3 1444 aa20.18■□□□□ 0.82
LRRC47-202ENST00000462356 LMTK2Q8IWU2 1503 aa20.17■□□□□ 0.82
LRRC47-202ENST00000462356 UNC13BO14795 1591 aa20.17■□□□□ 0.82
LRRC47-202ENST00000462356 NUP155O75694 1391 aa20.15■□□□□ 0.82
LRRC47-202ENST00000462356 NAIPQ13075 1403 aa20.15■□□□□ 0.82
LRRC47-202ENST00000462356 EFCAB6Q5THR3 1501 aa20.14■□□□□ 0.81
LRRC47-202ENST00000462356 NLRP1Q9C000 1473 aa20.14■□□□□ 0.81
LRRC47-202ENST00000462356 UGGT1Q9NYU2 1555 aa20.13■□□□□ 0.81
LRRC47-202ENST00000462356 DMRT2Q9Y5R5 561 aa20.12■□□□□ 0.81
LRRC47-202ENST00000462356 TET3O43151 1660 aa20.11■□□□□ 0.81
LRRC47-202ENST00000462356 GCC2Q8IWJ2 1684 aa20.11■□□□□ 0.81
LRRC47-202ENST00000462356 THEMISQ8N1K5 641 aaPredicted RBP20.11■□□□□ 0.81
LRRC47-202ENST00000462356 IQGAP3Q86VI3 1631 aa20.09■□□□□ 0.81
LRRC47-202ENST00000462356 SYNMO15061 1565 aa20.09■□□□□ 0.81
LRRC47-202ENST00000462356 IDI1Q13907 227 aa20.09■□□□□ 0.81
LRRC47-202ENST00000462356 PLA2R1Q13018 1463 aa20.09■□□□□ 0.81
LRRC47-202ENST00000462356 PKD2Q13563 968 aa20.08■□□□□ 0.81
LRRC47-202ENST00000462356 TRIM52Q96A61 297 aa20.08■□□□□ 0.81
LRRC47-202ENST00000462356 HFM1A2PYH4 1435 aa20.08■□□□□ 0.8
LRRC47-202ENST00000462356 PTPRTO14522 1441 aa20.08■□□□□ 0.8
LRRC47-202ENST00000462356 E9PCH4 1651 aa20.07■□□□□ 0.8
LRRC47-202ENST00000462356 PIK3C2BO00750 1634 aa20.07■□□□□ 0.8
LRRC47-202ENST00000462356 STAG3Q9UJ98 1225 aa20.07■□□□□ 0.8
LRRC47-202ENST00000462356 NOS1P29475 1434 aa20.07■□□□□ 0.8
LRRC47-202ENST00000462356 ANKLE2Q86XL3 938 aa20.06■□□□□ 0.8
LRRC47-202ENST00000462356 UBR1Q8IWV7 1749 aa20.06■□□□□ 0.8
LRRC47-202ENST00000462356 RPRD2Q5VT52 1461 aaKnown RBP20.04■□□□□ 0.8
LRRC47-202ENST00000462356 POLR1AO95602 1720 aaPredicted RBP20.03■□□□□ 0.8
LRRC47-202ENST00000462356 NEURL4Q96JN8 1562 aa20.01■□□□□ 0.79
LRRC47-202ENST00000462356 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
LRRC47-202ENST00000462356 LTKP29376 864 aa20■□□□□ 0.79
LRRC47-202ENST00000462356 ZNF335Q9H4Z2 1342 aaPredicted RBP20■□□□□ 0.79
LRRC47-202ENST00000462356 TXNDC2Q86VQ3 553 aa19.99■□□□□ 0.79
LRRC47-202ENST00000462356 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
LRRC47-202ENST00000462356 SLC52A1Q9NWF4 448 aa19.99■□□□□ 0.79
LRRC47-202ENST00000462356 ILDR1Q86SU0 546 aaPredicted RBP19.98■□□□□ 0.79
LRRC47-202ENST00000462356 CERKQ8TCT0 537 aa19.98■□□□□ 0.79
LRRC47-202ENST00000462356 NPHP4O75161 1426 aaPredicted RBP19.97■□□□□ 0.79
LRRC47-202ENST00000462356 SLC4A1APQ9BWU0 796 aaKnown RBP19.96■□□□□ 0.79
LRRC47-202ENST00000462356 MYO5BQ9ULV0 1848 aa19.95■□□□□ 0.78
LRRC47-202ENST00000462356 ADGRB3O60242 1522 aa19.95■□□□□ 0.78
LRRC47-202ENST00000462356 TMEM2Q9UHN6 1383 aa19.95■□□□□ 0.78
LRRC47-202ENST00000462356 ARHGAP23Q9P227 1491 aa19.94■□□□□ 0.78
LRRC47-202ENST00000462356 SLIT1O75093 1534 aa19.94■□□□□ 0.78
LRRC47-202ENST00000462356 FOXD1Q16676 465 aa19.94■□□□□ 0.78
LRRC47-202ENST00000462356 EID1Q9Y6B2 187 aa19.94■□□□□ 0.78
LRRC47-202ENST00000462356 SCAF11Q99590 1463 aaKnown RBP19.93■□□□□ 0.78
LRRC47-202ENST00000462356 LTBP4Q8N2S1 1624 aa19.93■□□□□ 0.78
LRRC47-202ENST00000462356 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
LRRC47-202ENST00000462356 MED14O60244 1454 aa19.92■□□□□ 0.78
LRRC47-202ENST00000462356 IQGAP1P46940 1657 aa19.92■□□□□ 0.78
LRRC47-202ENST00000462356 SPHKAPQ2M3C7 1700 aa19.92■□□□□ 0.78
LRRC47-202ENST00000462356 NUTM2DQ5VT03 806 aaPredicted RBP19.91■□□□□ 0.78
LRRC47-202ENST00000462356 TMEM131LA2VDJ0 1609 aa19.91■□□□□ 0.78
LRRC47-202ENST00000462356 KDM5AP29375 1690 aaKnown RBP19.91■□□□□ 0.78
LRRC47-202ENST00000462356 RAB3GAP2Q9H2M9 1393 aa19.88■□□□□ 0.77
LRRC47-202ENST00000462356 MPHOSPH9Q99550 1183 aa19.88■□□□□ 0.77
LRRC47-202ENST00000462356 FBXO41Q8TF61 875 aa19.87■□□□□ 0.77
LRRC47-202ENST00000462356 BCANQ96GW7 911 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms