RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 TOP2BQ02880 1626 aa10.15□□□□□ -0.79
VPS36-202ENST00000462289 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
VPS36-202ENST00000462289 POLA1P09884 1462 aaPredicted RBP10.14□□□□□ -0.79
VPS36-202ENST00000462289 WDR97A6NE52 1622 aa10.14□□□□□ -0.79
VPS36-202ENST00000462289 MFSD10Q14728 455 aa10.13□□□□□ -0.79
VPS36-202ENST00000462289 IFT140Q96RY7 1462 aa10.12□□□□□ -0.79
VPS36-202ENST00000462289 ARHGAP33O14559 1287 aa10.12□□□□□ -0.79
VPS36-202ENST00000462289 AXIN2Q9Y2T1 843 aa10.12□□□□□ -0.79
VPS36-202ENST00000462289 SYNJ1O43426 1573 aa10.12□□□□□ -0.79
VPS36-202ENST00000462289 DDX27Q96GQ7 796 aaKnown RBP10.1□□□□□ -0.79
VPS36-202ENST00000462289 WRNQ14191 1432 aaPredicted RBP eCLIP10.09□□□□□ -0.79
VPS36-202ENST00000462289 PPP4R3BQ5MIZ7 849 aa10.09□□□□□ -0.79
VPS36-202ENST00000462289 UPF1Q92900 1129 aaKnown RBP eCLIP10.09□□□□□ -0.79
VPS36-202ENST00000462289 LARP6Q9BRS8 491 aaKnown RBP10.09□□□□□ -0.79
VPS36-202ENST00000462289 FGD5Q6ZNL6 1462 aa10.09□□□□□ -0.79
VPS36-202ENST00000462289 AMER1Q5JTC6 1135 aaPredicted RBP10.07□□□□□ -0.8
VPS36-202ENST00000462289 ANO8Q9HCE9 1232 aaPredicted RBP10.07□□□□□ -0.8
VPS36-202ENST00000462289 ABCA10Q8WWZ4 1543 aa10.07□□□□□ -0.8
VPS36-202ENST00000462289 CADPS2Q86UW7 1296 aa10.06□□□□□ -0.8
VPS36-202ENST00000462289 BBXQ8WY36 941 aaPredicted RBP10.06□□□□□ -0.8
VPS36-202ENST00000462289 EIF4G3O43432 1585 aaKnown RBP10.05□□□□□ -0.8
VPS36-202ENST00000462289 ABCA5Q8WWZ7 1642 aa10.05□□□□□ -0.8
VPS36-202ENST00000462289 TK2O00142 265 aa10.05□□□□□ -0.8
VPS36-202ENST00000462289 ADGRD1Q6QNK2 874 aa10.05□□□□□ -0.8
VPS36-202ENST00000462289 ZNF608Q9ULD9 1512 aaPredicted RBP10.05□□□□□ -0.8
VPS36-202ENST00000462289 PSEN2P49810 448 aa10.04□□□□□ -0.8
VPS36-202ENST00000462289 DMRTA1Q5VZB9 504 aa10.04□□□□□ -0.8
VPS36-202ENST00000462289 RAD54L2Q9Y4B4 1467 aa10.03□□□□□ -0.8
VPS36-202ENST00000462289 SOGA1O94964 1423 aa10.02□□□□□ -0.81
VPS36-202ENST00000462289 HRO43593 1189 aa10.02□□□□□ -0.81
VPS36-202ENST00000462289 FOSBP53539 338 aa10.02□□□□□ -0.81
VPS36-202ENST00000462289 EMILIN3Q9NT22 766 aa10.02□□□□□ -0.81
VPS36-202ENST00000462289 EVI5O60447 810 aa10.01□□□□□ -0.81
VPS36-202ENST00000462289 ZNF454Q8N9F8 522 aa10.01□□□□□ -0.81
VPS36-202ENST00000462289 BCL2L12Q9HB09 334 aa10.01□□□□□ -0.81
VPS36-202ENST00000462289 JPH4Q96JJ6 628 aa10□□□□□ -0.81
VPS36-202ENST00000462289 RTN4Q9NQC3 1192 aaKnown RBP9.99□□□□□ -0.81
VPS36-202ENST00000462289 CAMK2BQ13554 666 aa9.98□□□□□ -0.81
VPS36-202ENST00000462289 PBRM1Q86U86 1689 aa9.98□□□□□ -0.81
VPS36-202ENST00000462289 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
VPS36-202ENST00000462289 KCNK17Q96T54 332 aa9.97□□□□□ -0.81
VPS36-202ENST00000462289 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
VPS36-202ENST00000462289 SLC4A5Q9BY07 1137 aa9.96□□□□□ -0.82
VPS36-202ENST00000462289 AQRO60306 1485 aaKnown RBP eCLIP9.96□□□□□ -0.82
VPS36-202ENST00000462289 MAGI1Q96QZ7 1491 aaPredicted RBP9.95□□□□□ -0.82
VPS36-202ENST00000462289 ERICH3Q5RHP9 1530 aa9.95□□□□□ -0.82
VPS36-202ENST00000462289 GRIN2BQ13224 1484 aa9.94□□□□□ -0.82
VPS36-202ENST00000462289 GAPVD1Q14C86 1478 aa9.94□□□□□ -0.82
VPS36-202ENST00000462289 VPS9D1Q9Y2B5 631 aa9.94□□□□□ -0.82
VPS36-202ENST00000462289 PTPREP23469 700 aa9.93□□□□□ -0.82
VPS36-202ENST00000462289 SPRYD3Q8NCJ5 442 aa9.93□□□□□ -0.82
VPS36-202ENST00000462289 ZDHHC16Q969W1 377 aa9.93□□□□□ -0.82
VPS36-202ENST00000462289 TDRD9Q8NDG6 1382 aaKnown RBP9.92□□□□□ -0.82
VPS36-202ENST00000462289 CHD1O14646 1710 aa9.92□□□□□ -0.82
VPS36-202ENST00000462289 ADAM33Q9BZ11 813 aa9.91□□□□□ -0.82
VPS36-202ENST00000462289 ADAMTS12P58397 1594 aa9.91□□□□□ -0.82
VPS36-202ENST00000462289 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.9□□□□□ -0.82
VPS36-202ENST00000462289 PCDHGA10Q9Y5H3 936 aa9.9□□□□□ -0.82
VPS36-202ENST00000462289 BHMG1C9JSJ3 638 aaPredicted RBP9.89□□□□□ -0.83
VPS36-202ENST00000462289 ZBED2Q9BTP6 218 aa9.89□□□□□ -0.83
VPS36-202ENST00000462289 HCSTQ9UBK5 93 aa9.89□□□□□ -0.83
VPS36-202ENST00000462289 SNAPC4Q5SXM2 1469 aa9.89□□□□□ -0.83
VPS36-202ENST00000462289 SYNJ2O15056 1496 aa9.88□□□□□ -0.83
VPS36-202ENST00000462289 PHF14O94880 888 aa9.88□□□□□ -0.83
VPS36-202ENST00000462289 CUL7Q14999 1698 aa9.87□□□□□ -0.83
VPS36-202ENST00000462289 DPYSL4O14531 572 aa9.86□□□□□ -0.83
VPS36-202ENST00000462289 KIF27Q86VH2 1401 aa9.86□□□□□ -0.83
VPS36-202ENST00000462289 FBXW7Q969H0 707 aa9.86□□□□□ -0.83
VPS36-202ENST00000462289 CLASP1Q7Z460 1538 aa9.86□□□□□ -0.83
VPS36-202ENST00000462289 TYW1BQ6NUM6 668 aa9.85□□□□□ -0.83
VPS36-202ENST00000462289 IGF1RP08069 1367 aa9.85□□□□□ -0.83
VPS36-202ENST00000462289 FHAD1B1AJZ9 1412 aa9.84□□□□□ -0.83
VPS36-202ENST00000462289 PPP1R3GB7ZBB8 358 aa9.84□□□□□ -0.83
VPS36-202ENST00000462289 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
VPS36-202ENST00000462289 NUP160Q12769 1436 aa9.83□□□□□ -0.84
VPS36-202ENST00000462289 GRIN2AQ12879 1464 aa9.83□□□□□ -0.84
VPS36-202ENST00000462289 KCTD12Q96CX2 325 aaKnown RBP9.82□□□□□ -0.84
VPS36-202ENST00000462289 EPAS1Q99814 870 aa9.82□□□□□ -0.84
VPS36-202ENST00000462289 PAXIP1Q6ZW49 1069 aaPredicted RBP9.81□□□□□ -0.84
VPS36-202ENST00000462289 CEP170Q5SW79 1584 aa9.8□□□□□ -0.84
VPS36-202ENST00000462289 PDIA6Q15084 440 aa9.8□□□□□ -0.84
VPS36-202ENST00000462289 SHROOM2Q13796 1616 aa9.8□□□□□ -0.84
VPS36-202ENST00000462289 RUSC2Q8N2Y8 1516 aa9.8□□□□□ -0.84
VPS36-202ENST00000462289 COL9A1P20849 921 aa9.79□□□□□ -0.84
VPS36-202ENST00000462289 CFAP44Q96MT7 982 aa9.79□□□□□ -0.84
VPS36-202ENST00000462289 ARIH1Q9Y4X5 557 aaPredicted RBP9.79□□□□□ -0.84
VPS36-202ENST00000462289 PRXQ9BXM0 1461 aa9.79□□□□□ -0.84
VPS36-202ENST00000462289 NBPF3Q9H094 633 aa9.78□□□□□ -0.84
VPS36-202ENST00000462289 RABGEF1Q9UJ41 708 aa9.78□□□□□ -0.84
VPS36-202ENST00000462289 EEA1Q15075 1411 aa9.77□□□□□ -0.85
VPS36-202ENST00000462289 E2F4Q16254 413 aa9.77□□□□□ -0.85
VPS36-202ENST00000462289 MRPL50Q8N5N7 158 aaKnown RBP9.77□□□□□ -0.85
VPS36-202ENST00000462289 PLA2G2EQ9NZK7 142 aa9.77□□□□□ -0.85
VPS36-202ENST00000462289 SPDYE16A6NNV3 312 aaPredicted RBP9.76□□□□□ -0.85
VPS36-202ENST00000462289 C6orf132Q5T0Z8 1188 aa9.76□□□□□ -0.85
VPS36-202ENST00000462289 THSD4Q6ZMP0 1018 aa9.76□□□□□ -0.85
VPS36-202ENST00000462289 ONECUT3O60422 494 aaPredicted RBP9.75□□□□□ -0.85
VPS36-202ENST00000462289 PROX2Q3B8N5 592 aa9.75□□□□□ -0.85
VPS36-202ENST00000462289 DDX12PQ92771 950 aa9.74□□□□□ -0.85
VPS36-202ENST00000462289 CARMIL1Q5VZK9 1371 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms