RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 PTPRMP28827 1452 aa12.8□□□□□ -0.36
SRRM1-204ENST00000461768 FAM135AQ9P2D6 1515 aa12.8□□□□□ -0.36
SRRM1-204ENST00000461768 GGT6Q6P531 493 aa12.8□□□□□ -0.36
SRRM1-204ENST00000461768 PPP6R1Q9UPN7 881 aa12.8□□□□□ -0.36
SRRM1-204ENST00000461768 DEPDC5O75140 1603 aa12.8□□□□□ -0.36
SRRM1-204ENST00000461768 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
SRRM1-204ENST00000461768 PRDM15P57071 1507 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-204ENST00000461768 MROH2AA6NES4 1674 aa12.78□□□□□ -0.36
SRRM1-204ENST00000461768 CLTCQ00610 1675 aaKnown RBP12.78□□□□□ -0.36
SRRM1-204ENST00000461768 GCC2Q8IWJ2 1684 aa12.78□□□□□ -0.36
SRRM1-204ENST00000461768 HFM1A2PYH4 1435 aa12.77□□□□□ -0.37
SRRM1-204ENST00000461768 NAIPQ13075 1403 aa12.77□□□□□ -0.37
SRRM1-204ENST00000461768 KDM5DQ9BY66 1539 aa12.77□□□□□ -0.37
SRRM1-204ENST00000461768 ESF1Q9H501 851 aaKnown RBP12.76□□□□□ -0.37
SRRM1-204ENST00000461768 ZC3H13Q5T200 1668 aaKnown RBP12.76□□□□□ -0.37
SRRM1-204ENST00000461768 UNC13BO14795 1591 aa12.75□□□□□ -0.37
SRRM1-204ENST00000461768 ABCC3O15438 1527 aa12.75□□□□□ -0.37
SRRM1-204ENST00000461768 C3P01024 1663 aa12.75□□□□□ -0.37
SRRM1-204ENST00000461768 VWDEQ8N2E2 1590 aa12.75□□□□□ -0.37
SRRM1-204ENST00000461768 WASHC2CQ9Y4E1 1318 aa12.74□□□□□ -0.37
SRRM1-204ENST00000461768 ZMYM3Q14202 1370 aa12.73□□□□□ -0.37
SRRM1-204ENST00000461768 CEP152O94986 1710 aa12.73□□□□□ -0.37
SRRM1-204ENST00000461768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.72□□□□□ -0.371e-7■■□□□ 14.5
SRRM1-204ENST00000461768 LMTK2Q8IWU2 1503 aa12.72□□□□□ -0.37
SRRM1-204ENST00000461768 KANK1Q14678 1352 aa12.71□□□□□ -0.37
SRRM1-204ENST00000461768 CAMSAP1Q5T5Y3 1602 aa12.71□□□□□ -0.37
SRRM1-204ENST00000461768 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
SRRM1-204ENST00000461768 PZPP20742 1482 aa12.7□□□□□ -0.38
SRRM1-204ENST00000461768 IQGAP3Q86VI3 1631 aa12.7□□□□□ -0.38
SRRM1-204ENST00000461768 PLPPR3Q6T4P5 718 aa12.69□□□□□ -0.38
SRRM1-204ENST00000461768 NPATQ14207 1427 aa12.69□□□□□ -0.38
SRRM1-204ENST00000461768 ARHGAP31Q2M1Z3 1444 aa12.68□□□□□ -0.38
SRRM1-204ENST00000461768 EFCAB6Q5THR3 1501 aa12.67□□□□□ -0.38
SRRM1-204ENST00000461768 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
SRRM1-204ENST00000461768 NUP155O75694 1391 aa12.67□□□□□ -0.38
SRRM1-204ENST00000461768 TET3O43151 1660 aa12.67□□□□□ -0.38
SRRM1-204ENST00000461768 SETD1BQ9UPS6 1966 aaKnown RBP12.65□□□□□ -0.38
SRRM1-204ENST00000461768 SPATA31D1Q6ZQQ2 1576 aa12.65□□□□□ -0.38
SRRM1-204ENST00000461768 PREX1Q8TCU6 1659 aa12.65□□□□□ -0.38
SRRM1-204ENST00000461768 FBXO31Q5XUX0 539 aaPredicted RBP12.64□□□□□ -0.39
SRRM1-204ENST00000461768 ERVK-7P63135 1459 aa12.64□□□□□ -0.39
SRRM1-204ENST00000461768 RPRD2Q5VT52 1461 aaKnown RBP12.64□□□□□ -0.39
SRRM1-204ENST00000461768 TRIM26Q12899 539 aaPredicted RBP12.63□□□□□ -0.39
SRRM1-204ENST00000461768 RAB3GAP2Q9H2M9 1393 aa12.63□□□□□ -0.39
SRRM1-204ENST00000461768 LMTK3Q96Q04 1460 aa12.63□□□□□ -0.39
SRRM1-204ENST00000461768 MYO3AQ8NEV4 1616 aa12.62□□□□□ -0.39
SRRM1-204ENST00000461768 E9PCH4 1651 aa12.62□□□□□ -0.39
SRRM1-204ENST00000461768 TNRQ92752 1358 aa12.62□□□□□ -0.39
SRRM1-204ENST00000461768 UHRF1BP1Q6BDS2 1440 aa12.62□□□□□ -0.39
SRRM1-204ENST00000461768 ACIN1Q9UKV3 1341 aaKnown RBP12.61□□□□□ -0.39
SRRM1-204ENST00000461768 ZNF142P52746 1687 aaPredicted RBP12.61□□□□□ -0.39
SRRM1-204ENST00000461768 CFAP65Q6ZU64 1925 aaKnown RBP12.6□□□□□ -0.39
SRRM1-204ENST00000461768 TRIM52Q96A61 297 aa12.6□□□□□ -0.39
SRRM1-204ENST00000461768 NOS1P29475 1434 aa12.6□□□□□ -0.39
SRRM1-204ENST00000461768 HRCP23327 699 aa12.59□□□□□ -0.39
SRRM1-204ENST00000461768 SYNMO15061 1565 aa12.59□□□□□ -0.39
SRRM1-204ENST00000461768 CEP170BQ9Y4F5 1589 aaPredicted RBP12.59□□□□□ -0.39
SRRM1-204ENST00000461768 NLRP1Q9C000 1473 aa12.59□□□□□ -0.39
SRRM1-204ENST00000461768 A2ML1A8K2U0 1454 aa12.58□□□□□ -0.4
SRRM1-204ENST00000461768 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
SRRM1-204ENST00000461768 PTPRTO14522 1441 aa12.55□□□□□ -0.4
SRRM1-204ENST00000461768 SPHKAPQ2M3C7 1700 aa12.55□□□□□ -0.4
SRRM1-204ENST00000461768 PKD2Q13563 968 aa12.55□□□□□ -0.4
SRRM1-204ENST00000461768 PIK3C2BO00750 1634 aa12.55□□□□□ -0.4
SRRM1-204ENST00000461768 HSPA2P54652 639 aa12.54□□□□□ -0.4
SRRM1-204ENST00000461768 MPHOSPH9Q99550 1183 aa12.54□□□□□ -0.4
SRRM1-204ENST00000461768 UGGT1Q9NYU2 1555 aa12.53□□□□□ -0.4
SRRM1-204ENST00000461768 UBR1Q8IWV7 1749 aa12.53□□□□□ -0.4
SRRM1-204ENST00000461768 TRPM2O94759 1503 aa12.52□□□□□ -0.4
SRRM1-204ENST00000461768 KDM5AP29375 1690 aaKnown RBP12.52□□□□□ -0.4
SRRM1-204ENST00000461768 SLC52A1Q9NWF4 448 aa12.52□□□□□ -0.41
SRRM1-204ENST00000461768 PLA2R1Q13018 1463 aa12.52□□□□□ -0.41
SRRM1-204ENST00000461768 IDI1Q13907 227 aa12.51□□□□□ -0.41
SRRM1-204ENST00000461768 ADGRB3O60242 1522 aa12.51□□□□□ -0.41
SRRM1-204ENST00000461768 CLTCL1P53675 1640 aa12.49□□□□□ -0.41
SRRM1-204ENST00000461768 FOXD1Q16676 465 aa12.49□□□□□ -0.41
SRRM1-204ENST00000461768 THEMISQ8N1K5 641 aaPredicted RBP12.49□□□□□ -0.41
SRRM1-204ENST00000461768 STRCQ7RTU9 1775 aa12.48□□□□□ -0.41
SRRM1-204ENST00000461768 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
SRRM1-204ENST00000461768 SLIT1O75093 1534 aa12.47□□□□□ -0.41
SRRM1-204ENST00000461768 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.41
SRRM1-204ENST00000461768 MYO5BQ9ULV0 1848 aa12.46□□□□□ -0.41
SRRM1-204ENST00000461768 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.41
SRRM1-204ENST00000461768 TMEM2Q9UHN6 1383 aa12.45□□□□□ -0.42
SRRM1-204ENST00000461768 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
SRRM1-204ENST00000461768 POLR1AO95602 1720 aaPredicted RBP12.45□□□□□ -0.42
SRRM1-204ENST00000461768 KIF1BO60333 1816 aa12.44□□□□□ -0.42
SRRM1-204ENST00000461768 CCDC144AA2RUR9 1427 aa12.44□□□□□ -0.42
SRRM1-204ENST00000461768 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
SRRM1-204ENST00000461768 NEURL4Q96JN8 1562 aa12.43□□□□□ -0.42
SRRM1-204ENST00000461768 NCKAP5LQ9HCH0 1330 aa12.42□□□□□ -0.42
SRRM1-204ENST00000461768 SCAF11Q99590 1463 aaKnown RBP12.42□□□□□ -0.42
SRRM1-204ENST00000461768 CHGAP10645 457 aaKnown RBP12.42□□□□□ -0.42
SRRM1-204ENST00000461768 ANKLE2Q86XL3 938 aa12.42□□□□□ -0.42
SRRM1-204ENST00000461768 ZFYVE9O95405 1425 aa12.42□□□□□ -0.42
SRRM1-204ENST00000461768 MED14O60244 1454 aa12.41□□□□□ -0.42
SRRM1-204ENST00000461768 LTKP29376 864 aa12.41□□□□□ -0.42
SRRM1-204ENST00000461768 SPATA31E1Q6ZUB1 1445 aa12.4□□□□□ -0.42
SRRM1-204ENST00000461768 RIMS2Q9UQ26 1411 aa12.4□□□□□ -0.42
SRRM1-204ENST00000461768 DMRT2Q9Y5R5 561 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms