RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
C9orf78-203ENST00000461539 AGLP35573 1532 aa14.41□□□□□ -0.1
C9orf78-203ENST00000461539 ESF1Q9H501 851 aaKnown RBP14.41□□□□□ -0.1
C9orf78-203ENST00000461539 WASHC2CQ9Y4E1 1318 aa14.41□□□□□ -0.1
C9orf78-203ENST00000461539 REREQ9P2R6 1566 aa14.4□□□□□ -0.1
C9orf78-203ENST00000461539 MPHOSPH9Q99550 1183 aa14.4□□□□□ -0.1
C9orf78-203ENST00000461539 GCC2Q8IWJ2 1684 aa14.39□□□□□ -0.11
C9orf78-203ENST00000461539 PPP6R1Q9UPN7 881 aa14.39□□□□□ -0.11
C9orf78-203ENST00000461539 PKD2Q13563 968 aa14.37□□□□□ -0.11
C9orf78-203ENST00000461539 CCER1Q8TC90 406 aaPredicted RBP14.36□□□□□ -0.11
C9orf78-203ENST00000461539 DHX57Q6P158 1386 aaKnown RBP14.35□□□□□ -0.11
C9orf78-203ENST00000461539 EIF2AK4Q9P2K8 1649 aaKnown RBP14.35□□□□□ -0.11
C9orf78-203ENST00000461539 PZPP20742 1482 aa14.34□□□□□ -0.11
C9orf78-203ENST00000461539 FOXD1Q16676 465 aa14.34□□□□□ -0.11
C9orf78-203ENST00000461539 PRDM15P57071 1507 aaPredicted RBP14.32□□□□□ -0.12
C9orf78-203ENST00000461539 FAM135AQ9P2D6 1515 aa14.32□□□□□ -0.12
C9orf78-203ENST00000461539 KDM5DQ9BY66 1539 aa14.31□□□□□ -0.12
C9orf78-203ENST00000461539 UNC13BO14795 1591 aa14.31□□□□□ -0.12
C9orf78-203ENST00000461539 RNF17Q9BXT8 1623 aaKnown RBP14.3□□□□□ -0.12
C9orf78-203ENST00000461539 ABCC3O15438 1527 aa14.3□□□□□ -0.12
C9orf78-203ENST00000461539 MROH1Q8NDA8 1641 aa14.3□□□□□ -0.12
C9orf78-203ENST00000461539 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
C9orf78-203ENST00000461539 ZMYM3Q14202 1370 aa14.29□□□□□ -0.12
C9orf78-203ENST00000461539 CNTLNQ9NXG0 1405 aa14.29□□□□□ -0.12
C9orf78-203ENST00000461539 VWDEQ8N2E2 1590 aa14.29□□□□□ -0.12
C9orf78-203ENST00000461539 SIGLEC1Q9BZZ2 1709 aa14.29□□□□□ -0.12
C9orf78-203ENST00000461539 LMTK2Q8IWU2 1503 aa14.28□□□□□ -0.12
C9orf78-203ENST00000461539 BCORL1Q5H9F3 1711 aa14.27□□□□□ -0.12
C9orf78-203ENST00000461539 DEPDC5O75140 1603 aa14.27□□□□□ -0.12
C9orf78-203ENST00000461539 NPATQ14207 1427 aa14.26□□□□□ -0.13
C9orf78-203ENST00000461539 CEBPAP49715 358 aaPredicted RBP14.26□□□□□ -0.13
C9orf78-203ENST00000461539 FBXO31Q5XUX0 539 aaPredicted RBP14.26□□□□□ -0.13
C9orf78-203ENST00000461539 IQGAP3Q86VI3 1631 aa14.25□□□□□ -0.13
C9orf78-203ENST00000461539 ARHGAP31Q2M1Z3 1444 aa14.24□□□□□ -0.13
C9orf78-203ENST00000461539 ANKRD30BQ9BXX2 1392 aa14.23□□□□□ -0.13
C9orf78-203ENST00000461539 CLSPNQ9HAW4 1339 aa14.23□□□□□ -0.13
C9orf78-203ENST00000461539 NEUROD1Q13562 356 aa14.23□□□□□ -0.13
C9orf78-203ENST00000461539 EFCAB6Q5THR3 1501 aa14.22□□□□□ -0.13
C9orf78-203ENST00000461539 SIN3AQ96ST3 1273 aa14.22□□□□□ -0.13
C9orf78-203ENST00000461539 RPRD2Q5VT52 1461 aaKnown RBP14.21□□□□□ -0.13
C9orf78-203ENST00000461539 KDM4FA0A1W2PPD8 638 aa14.21□□□□□ -0.13
C9orf78-203ENST00000461539 PLA2R1Q13018 1463 aa14.19□□□□□ -0.14
C9orf78-203ENST00000461539 PTPRTO14522 1441 aa14.19□□□□□ -0.14
C9orf78-203ENST00000461539 TET3O43151 1660 aa14.19□□□□□ -0.14
C9orf78-203ENST00000461539 CCDC144AA2RUR9 1427 aa14.18□□□□□ -0.14
C9orf78-203ENST00000461539 NOS1P29475 1434 aa14.18□□□□□ -0.14
C9orf78-203ENST00000461539 TNRQ92752 1358 aa14.18□□□□□ -0.14
C9orf78-203ENST00000461539 ERVK-7P63135 1459 aa14.18□□□□□ -0.14
C9orf78-203ENST00000461539 CHGAP10645 457 aaKnown RBP14.17□□□□□ -0.14
C9orf78-203ENST00000461539 SLC52A1Q9NWF4 448 aa14.17□□□□□ -0.14
C9orf78-203ENST00000461539 ZC3H13Q5T200 1668 aaKnown RBP14.17□□□□□ -0.14
C9orf78-203ENST00000461539 MADDQ8WXG6 1647 aa14.16□□□□□ -0.14
C9orf78-203ENST00000461539 IDI1Q13907 227 aa14.16□□□□□ -0.14
C9orf78-203ENST00000461539 PTPRMP28827 1452 aa14.16□□□□□ -0.14
C9orf78-203ENST00000461539 CLTCQ00610 1675 aaKnown RBP14.16□□□□□ -0.14
C9orf78-203ENST00000461539 CAMSAP1Q5T5Y3 1602 aa14.15□□□□□ -0.14
C9orf78-203ENST00000461539 ADAMTSL3P82987 1691 aa14.15□□□□□ -0.14
C9orf78-203ENST00000461539 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
C9orf78-203ENST00000461539 CEP152O94986 1710 aa14.15□□□□□ -0.14
C9orf78-203ENST00000461539 RGL3Q3MIN7 710 aa14.13□□□□□ -0.15
C9orf78-203ENST00000461539 E9PCH4 1651 aa14.13□□□□□ -0.15
C9orf78-203ENST00000461539 TRPM2O94759 1503 aa14.12□□□□□ -0.15
C9orf78-203ENST00000461539 ZNF326Q5BKZ1 582 aaKnown RBP14.11□□□□□ -0.15
C9orf78-203ENST00000461539 SPATA31D1Q6ZQQ2 1576 aa14.11□□□□□ -0.15
C9orf78-203ENST00000461539 RIMS1Q86UR5 1692 aaKnown RBP14.1□□□□□ -0.15
C9orf78-203ENST00000461539 TONSLQ96HA7 1378 aa14.1□□□□□ -0.15
C9orf78-203ENST00000461539 UGGT1Q9NYU2 1555 aa14.1□□□□□ -0.15
C9orf78-203ENST00000461539 FER1L4A9Z1Z3 1794 aa14.1□□□□□ -0.15
C9orf78-203ENST00000461539 MROH2AA6NES4 1674 aa14.08□□□□□ -0.16
C9orf78-203ENST00000461539 L3MBTL2Q969R5 705 aa14.08□□□□□ -0.16
C9orf78-203ENST00000461539 SYNMO15061 1565 aa14.08□□□□□ -0.16
C9orf78-203ENST00000461539 NLRP1Q9C000 1473 aa14.07□□□□□ -0.16
C9orf78-203ENST00000461539 ZEB1P37275 1124 aaPredicted RBP14.07□□□□□ -0.16
C9orf78-203ENST00000461539 TIMELESSQ9UNS1 1208 aa14.07□□□□□ -0.16
C9orf78-203ENST00000461539 DCAF11Q8TEB1 546 aa14.06□□□□□ -0.16
C9orf78-203ENST00000461539 KDM2AQ9Y2K7 1162 aa14.06□□□□□ -0.16
C9orf78-203ENST00000461539 SPATA31E1Q6ZUB1 1445 aa14.06□□□□□ -0.16
C9orf78-203ENST00000461539 THEMISQ8N1K5 641 aaPredicted RBP14.05□□□□□ -0.16
C9orf78-203ENST00000461539 CLTCL1P53675 1640 aa14.04□□□□□ -0.16
C9orf78-203ENST00000461539 C3P01024 1663 aa14.04□□□□□ -0.16
C9orf78-203ENST00000461539 PREX1Q8TCU6 1659 aa14.04□□□□□ -0.16
C9orf78-203ENST00000461539 UHRF1BP1Q6BDS2 1440 aa14.04□□□□□ -0.16
C9orf78-203ENST00000461539 NUTM2DQ5VT03 806 aaPredicted RBP14.03□□□□□ -0.16
C9orf78-203ENST00000461539 RPGRIP1LQ68CZ1 1315 aa14.03□□□□□ -0.16
C9orf78-203ENST00000461539 SPHKAPQ2M3C7 1700 aa14.02□□□□□ -0.16
C9orf78-203ENST00000461539 A2ML1A8K2U0 1454 aa14.02□□□□□ -0.16
C9orf78-203ENST00000461539 PPP1R15AO75807 674 aaPredicted RBP14.01□□□□□ -0.17
C9orf78-203ENST00000461539 HDGFP51858 240 aaKnown RBP14.01□□□□□ -0.17
C9orf78-203ENST00000461539 ADGRB3O60242 1522 aa14□□□□□ -0.17
C9orf78-203ENST00000461539 TMEM2Q9UHN6 1383 aa14□□□□□ -0.17
C9orf78-203ENST00000461539 ABCF1Q8NE71 845 aaKnown RBP eCLIP14□□□□□ -0.17
C9orf78-203ENST00000461539 STAC3Q96MF2 364 aa14□□□□□ -0.17
C9orf78-203ENST00000461539 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
C9orf78-203ENST00000461539 TXNDC2Q86VQ3 553 aa13.99□□□□□ -0.17
C9orf78-203ENST00000461539 EID1Q9Y6B2 187 aa13.99□□□□□ -0.17
C9orf78-203ENST00000461539 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
C9orf78-203ENST00000461539 PIK3C2BO00750 1634 aa13.98□□□□□ -0.17
C9orf78-203ENST00000461539 SENP3Q9H4L4 574 aaPredicted RBP13.98□□□□□ -0.17
C9orf78-203ENST00000461539 ADGRF5Q8IZF2 1346 aa13.97□□□□□ -0.17
C9orf78-203ENST00000461539 HSPA2P54652 639 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms