RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 DHX29Q7Z478 1369 aaKnown RBP16.46■□□□□ 0.23
SMNDC1-203ENST00000460483 ARID4BQ4LE39 1312 aaPredicted RBP16.45■□□□□ 0.22
SMNDC1-203ENST00000460483 FRMPD1Q5SYB0 1578 aa16.43■□□□□ 0.22
SMNDC1-203ENST00000460483 A2MP01023 1474 aa16.43■□□□□ 0.22
SMNDC1-203ENST00000460483 DUOX2Q9NRD8 1548 aa16.43■□□□□ 0.22
SMNDC1-203ENST00000460483 INO80Q9ULG1 1556 aaPredicted RBP16.43■□□□□ 0.22
SMNDC1-203ENST00000460483 ESF1Q9H501 851 aaKnown RBP16.42■□□□□ 0.22
SMNDC1-203ENST00000460483 ERBINQ96RT1 1412 aa16.42■□□□□ 0.22
SMNDC1-203ENST00000460483 YEATS2Q9ULM3 1422 aa16.42■□□□□ 0.22
SMNDC1-203ENST00000460483 ANKRD50Q9ULJ7 1429 aa16.41■□□□□ 0.22
SMNDC1-203ENST00000460483 PLXNC1O60486 1568 aa16.41■□□□□ 0.22
SMNDC1-203ENST00000460483 ARHGEF40Q8TER5 1519 aa16.4■□□□□ 0.22
SMNDC1-203ENST00000460483 HFM1A2PYH4 1435 aa16.4■□□□□ 0.22
SMNDC1-203ENST00000460483 PTPRKQ15262 1439 aa16.4■□□□□ 0.22
SMNDC1-203ENST00000460483 REREQ9P2R6 1566 aa16.39■□□□□ 0.21
SMNDC1-203ENST00000460483 KIF3BO15066 747 aa16.39■□□□□ 0.21
SMNDC1-203ENST00000460483 HRCP23327 699 aa16.39■□□□□ 0.21
SMNDC1-203ENST00000460483 CROCC2H7BZ55 1655 aa16.39■□□□□ 0.21
SMNDC1-203ENST00000460483 KANK1Q14678 1352 aa16.38■□□□□ 0.21
SMNDC1-203ENST00000460483 KIDINS220Q9ULH0 1771 aa16.36■□□□□ 0.21
SMNDC1-203ENST00000460483 AGLP35573 1532 aa16.36■□□□□ 0.21
SMNDC1-203ENST00000460483 DIP2CQ9Y2E4 1556 aa16.36■□□□□ 0.21
SMNDC1-203ENST00000460483 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
SMNDC1-203ENST00000460483 ADGBQ8N7X0 1667 aa16.35■□□□□ 0.21
SMNDC1-203ENST00000460483 NAIPQ13075 1403 aa16.35■□□□□ 0.21
SMNDC1-203ENST00000460483 GGT6Q6P531 493 aa16.34■□□□□ 0.21
SMNDC1-203ENST00000460483 PCGF6Q9BYE7 350 aa16.33■□□□□ 0.2
SMNDC1-203ENST00000460483 ABCA6Q8N139 1617 aa16.33■□□□□ 0.2
SMNDC1-203ENST00000460483 WASHC2CQ9Y4E1 1318 aa16.31■□□□□ 0.2
SMNDC1-203ENST00000460483 TRIM52Q96A61 297 aa16.3■□□□□ 0.2
SMNDC1-203ENST00000460483 EIF2AK4Q9P2K8 1649 aaKnown RBP16.3■□□□□ 0.2
SMNDC1-203ENST00000460483 MLECQ14165 292 aa16.29■□□□□ 0.2
SMNDC1-203ENST00000460483 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
SMNDC1-203ENST00000460483 FAM135AQ9P2D6 1515 aa16.28■□□□□ 0.2
SMNDC1-203ENST00000460483 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
SMNDC1-203ENST00000460483 NUP155O75694 1391 aa16.26■□□□□ 0.19
SMNDC1-203ENST00000460483 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
SMNDC1-203ENST00000460483 ABCB7O75027 752 aa16.24■□□□□ 0.19
SMNDC1-203ENST00000460483 GCC2Q8IWJ2 1684 aa16.22■□□□□ 0.19
SMNDC1-203ENST00000460483 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
SMNDC1-203ENST00000460483 BCORL1Q5H9F3 1711 aa16.22■□□□□ 0.19
SMNDC1-203ENST00000460483 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
SMNDC1-203ENST00000460483 KDM5DQ9BY66 1539 aa16.19■□□□□ 0.18
SMNDC1-203ENST00000460483 RNF17Q9BXT8 1623 aaKnown RBP16.19■□□□□ 0.18
SMNDC1-203ENST00000460483 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
SMNDC1-203ENST00000460483 MPHOSPH9Q99550 1183 aa16.17■□□□□ 0.18
SMNDC1-203ENST00000460483 ZMYM3Q14202 1370 aa16.16■□□□□ 0.18
SMNDC1-203ENST00000460483 LMTK2Q8IWU2 1503 aa16.15■□□□□ 0.18
SMNDC1-203ENST00000460483 UNC13BO14795 1591 aa16.15■□□□□ 0.18
SMNDC1-203ENST00000460483 ARHGAP31Q2M1Z3 1444 aa16.15■□□□□ 0.18
SMNDC1-203ENST00000460483 DEPDC5O75140 1603 aa16.15■□□□□ 0.18
SMNDC1-203ENST00000460483 RPRD2Q5VT52 1461 aaKnown RBP16.15■□□□□ 0.18
SMNDC1-203ENST00000460483 ZC3H13Q5T200 1668 aaKnown RBP16.14■□□□□ 0.17
SMNDC1-203ENST00000460483 ABCC3O15438 1527 aa16.13■□□□□ 0.17
SMNDC1-203ENST00000460483 PKD2Q13563 968 aa16.12■□□□□ 0.17
SMNDC1-203ENST00000460483 VWDEQ8N2E2 1590 aa16.1■□□□□ 0.17
SMNDC1-203ENST00000460483 SLC52A1Q9NWF4 448 aa16.1■□□□□ 0.17
SMNDC1-203ENST00000460483 IQGAP3Q86VI3 1631 aa16.09■□□□□ 0.17
SMNDC1-203ENST00000460483 NPATQ14207 1427 aa16.09■□□□□ 0.17
SMNDC1-203ENST00000460483 PZPP20742 1482 aa16.09■□□□□ 0.17
SMNDC1-203ENST00000460483 MROH1Q8NDA8 1641 aa16.08■□□□□ 0.17
SMNDC1-203ENST00000460483 KDM4FA0A1W2PPD8 638 aa16.07■□□□□ 0.16
SMNDC1-203ENST00000460483 ADAMTSL3P82987 1691 aa16.07■□□□□ 0.16
SMNDC1-203ENST00000460483 EFCAB6Q5THR3 1501 aa16.06■□□□□ 0.16
SMNDC1-203ENST00000460483 PTPRMP28827 1452 aa16.06■□□□□ 0.16
SMNDC1-203ENST00000460483 CLSPNQ9HAW4 1339 aa16.06■□□□□ 0.16
SMNDC1-203ENST00000460483 MROH2AA6NES4 1674 aa16.05■□□□□ 0.16
SMNDC1-203ENST00000460483 TET3O43151 1660 aa16.05■□□□□ 0.16
SMNDC1-203ENST00000460483 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
SMNDC1-203ENST00000460483 MADDQ8WXG6 1647 aa16.05■□□□□ 0.16
SMNDC1-203ENST00000460483 CCER1Q8TC90 406 aaPredicted RBP16.04■□□□□ 0.16
SMNDC1-203ENST00000460483 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
SMNDC1-203ENST00000460483 FER1L4A9Z1Z3 1794 aa16.03■□□□□ 0.16
SMNDC1-203ENST00000460483 TNRQ92752 1358 aa16.03■□□□□ 0.16
SMNDC1-203ENST00000460483 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.16
SMNDC1-203ENST00000460483 CEBPAP49715 358 aaPredicted RBP16.02■□□□□ 0.16
SMNDC1-203ENST00000460483 HDGFP51858 240 aaKnown RBP16.02■□□□□ 0.16
SMNDC1-203ENST00000460483 CAMSAP1Q5T5Y3 1602 aa16.01■□□□□ 0.15
SMNDC1-203ENST00000460483 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
SMNDC1-203ENST00000460483 POTEHQ6S545 545 aa16.01■□□□□ 0.15
SMNDC1-203ENST00000460483 CCDC144AA2RUR9 1427 aa16.01■□□□□ 0.15
SMNDC1-203ENST00000460483 ERVK-7P63135 1459 aa16■□□□□ 0.15
SMNDC1-203ENST00000460483 NLRP1Q9C000 1473 aa16■□□□□ 0.15
SMNDC1-203ENST00000460483 FBXO31Q5XUX0 539 aaPredicted RBP16■□□□□ 0.15
SMNDC1-203ENST00000460483 PTPRTO14522 1441 aa16■□□□□ 0.15
SMNDC1-203ENST00000460483 NOS1P29475 1434 aa16■□□□□ 0.15
SMNDC1-203ENST00000460483 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
SMNDC1-203ENST00000460483 UHRF1BP1Q6BDS2 1440 aa15.98■□□□□ 0.15
SMNDC1-203ENST00000460483 THEMISQ8N1K5 641 aaPredicted RBP15.98■□□□□ 0.15
SMNDC1-203ENST00000460483 RIMS1Q86UR5 1692 aaKnown RBP15.98■□□□□ 0.15
SMNDC1-203ENST00000460483 CEP152O94986 1710 aa15.97■□□□□ 0.15
SMNDC1-203ENST00000460483 SPATA31D1Q6ZQQ2 1576 aa15.96■□□□□ 0.15
SMNDC1-203ENST00000460483 STAC3Q96MF2 364 aa15.96■□□□□ 0.15
SMNDC1-203ENST00000460483 ANKRD30BQ9BXX2 1392 aa15.96■□□□□ 0.15
SMNDC1-203ENST00000460483 CHGAP10645 457 aaKnown RBP15.95■□□□□ 0.14
SMNDC1-203ENST00000460483 IDI1Q13907 227 aa15.95■□□□□ 0.14
SMNDC1-203ENST00000460483 TRPM2O94759 1503 aa15.94■□□□□ 0.14
SMNDC1-203ENST00000460483 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
SMNDC1-203ENST00000460483 E9PCH4 1651 aa15.92■□□□□ 0.14
SMNDC1-203ENST00000460483 C3P01024 1663 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms