RNA–Protein interactions for RNA: ENST00000458420.7

CLSTN2-201, Transcript of calsyntenin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLSTN2, Length 14,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2-201ENST00000458420 ITPRIPQ8IWB1 547 aa8.86□□□□□ -0.99
CLSTN2-201ENST00000458420 FOXD4L6Q3SYB3 417 aaPredicted RBP8.86□□□□□ -0.99
CLSTN2-201ENST00000458420 FOXD4L3Q6VB84 417 aaPredicted RBP8.86□□□□□ -0.99
CLSTN2-201ENST00000458420 WASHC2CQ9Y4E1 1318 aa8.86□□□□□ -0.99
CLSTN2-201ENST00000458420 APPP05067 770 aa8.86□□□□□ -0.99
CLSTN2-201ENST00000458420 ECM2O94769 699 aaPredicted RBP8.85□□□□□ -0.99
CLSTN2-201ENST00000458420 KIF3BO15066 747 aa8.85□□□□□ -0.99
CLSTN2-201ENST00000458420 SUPT16HQ9Y5B9 1047 aaKnown RBP8.85□□□□□ -0.99
CLSTN2-201ENST00000458420 HSCBQ8IWL3 235 aa8.85□□□□□ -0.99
CLSTN2-201ENST00000458420 TTC5Q8N0Z6 440 aa8.85□□□□□ -0.99
CLSTN2-201ENST00000458420 AKAP17AQ02040 695 aaKnown RBP8.85□□□□□ -0.99
CLSTN2-201ENST00000458420 ZCCHC6Q5VYS8 1495 aaKnown RBP8.84□□□□□ -0.99
CLSTN2-201ENST00000458420 R3HCC1Q9Y3T6 440 aaKnown RBP8.84□□□□□ -0.99
CLSTN2-201ENST00000458420 TPD52L1Q16890 204 aaPredicted RBP8.83□□□□□ -1
CLSTN2-201ENST00000458420 RBM5P52756 815 aaKnown RBP eCLIP8.83□□□□□ -1
CLSTN2-201ENST00000458420 ACIN1Q9UKV3 1341 aaKnown RBP8.83□□□□□ -1
CLSTN2-201ENST00000458420 WWC2Q6AWC2 1192 aa8.82□□□□□ -1
CLSTN2-201ENST00000458420 CHMP4BQ9H444 224 aaKnown RBP8.82□□□□□ -1
CLSTN2-201ENST00000458420 ELL2O00472 640 aaPredicted RBP8.82□□□□□ -1
CLSTN2-201ENST00000458420 CCDC146Q8IYE0 955 aa8.82□□□□□ -1
CLSTN2-201ENST00000458420 FOSBP53539 338 aa8.82□□□□□ -1
CLSTN2-201ENST00000458420 TRAK1Q9UPV9 953 aa8.82□□□□□ -1
CLSTN2-201ENST00000458420 ATP2B2Q01814 1243 aa8.81□□□□□ -1
CLSTN2-201ENST00000458420 GZF1Q9H116 711 aaPredicted RBP8.81□□□□□ -1
CLSTN2-201ENST00000458420 STK11IPQ8N1F8 1099 aa8.81□□□□□ -1
CLSTN2-201ENST00000458420 AK7Q96M32 723 aa8.81□□□□□ -1
CLSTN2-201ENST00000458420 TMEM87AQ8NBN3 555 aa8.81□□□□□ -1
CLSTN2-201ENST00000458420 ZFYVE27Q5T4F4 411 aa8.81□□□□□ -1
CLSTN2-201ENST00000458420 SIN3AQ96ST3 1273 aa8.81□□□□□ -1
CLSTN2-201ENST00000458420 PCMTD1Q96MG8 357 aaPredicted RBP8.81□□□□□ -1
CLSTN2-201ENST00000458420 KAT6BQ8WYB5 2073 aa8.8□□□□□ -1
CLSTN2-201ENST00000458420 MSNP26038 577 aaKnown RBP8.8□□□□□ -1
CLSTN2-201ENST00000458420 CCDC97Q96F63 343 aaPredicted RBP8.8□□□□□ -1
CLSTN2-201ENST00000458420 RBM42Q9BTD8 480 aaKnown RBP8.8□□□□□ -1
CLSTN2-201ENST00000458420 WWC3Q9ULE0 1092 aa8.8□□□□□ -1
CLSTN2-201ENST00000458420 CA8P35219 290 aa8.8□□□□□ -1
CLSTN2-201ENST00000458420 SF3A1Q15459 793 aaKnown RBP8.8□□□□□ -1
CLSTN2-201ENST00000458420 FAM69CQ0P6D2 419 aa8.8□□□□□ -1
CLSTN2-201ENST00000458420 RILPL2Q969X0 211 aa8.8□□□□□ -1
CLSTN2-201ENST00000458420 TTLL12Q14166 644 aaPredicted RBP8.8□□□□□ -1
CLSTN2-201ENST00000458420 TPM4P67936 248 aa8.79□□□□□ -1
CLSTN2-201ENST00000458420 AIMP1Q12904 312 aaKnown RBP8.79□□□□□ -1
CLSTN2-201ENST00000458420 CHMP4CQ96CF2 233 aa8.79□□□□□ -1
CLSTN2-201ENST00000458420 CCNB3Q8WWL7 1395 aa8.79□□□□□ -1
CLSTN2-201ENST00000458420 RSF1Q96T23 1441 aaPredicted RBP8.78□□□□□ -1
CLSTN2-201ENST00000458420 CCAR2Q8N163 923 aaKnown RBP8.78□□□□□ -1
CLSTN2-201ENST00000458420 MCTP1Q6DN14 999 aa8.77□□□□□ -1
CLSTN2-201ENST00000458420 HNRNPMP52272 730 aaKnown RBP eCLIP8.77□□□□□ -1
CLSTN2-201ENST00000458420 ZNF219Q9P2Y4 722 aaPredicted RBP8.77□□□□□ -1
CLSTN2-201ENST00000458420 MS4A1P11836 297 aa8.77□□□□□ -1.01
CLSTN2-201ENST00000458420 MIER1Q8N108 512 aa8.77□□□□□ -1.01
CLSTN2-201ENST00000458420 SYNE3Q6ZMZ3 975 aa8.77□□□□□ -1.01
CLSTN2-201ENST00000458420 CLUAP1Q96AJ1 413 aa8.77□□□□□ -1.01
CLSTN2-201ENST00000458420 TEFQ10587 303 aa8.76□□□□□ -1.01
CLSTN2-201ENST00000458420 BICDL1Q6ZP65 573 aa8.76□□□□□ -1.01
CLSTN2-201ENST00000458420 BCL11BQ9C0K0 894 aaPredicted RBP8.76□□□□□ -1.01
CLSTN2-201ENST00000458420 ODF2Q5BJF6 829 aa8.76□□□□□ -1.01
CLSTN2-201ENST00000458420 NFXL1Q6ZNB6 911 aa8.76□□□□□ -1.01
CLSTN2-201ENST00000458420 PPP4R2Q9NY27 417 aa8.76□□□□□ -1.01
CLSTN2-201ENST00000458420 H3BQV1 296 aa8.76□□□□□ -1.01
CLSTN2-201ENST00000458420 IFFO2Q5TF58 517 aa8.76□□□□□ -1.01
CLSTN2-201ENST00000458420 C16orf71Q8IYS4 520 aaPredicted RBP8.75□□□□□ -1.01
CLSTN2-201ENST00000458420 PODXL2Q9NZ53 605 aa8.75□□□□□ -1.01
CLSTN2-201ENST00000458420 RRP7AQ9Y3A4 280 aaKnown RBP8.75□□□□□ -1.01
CLSTN2-201ENST00000458420 MFAP1P55081 439 aaKnown RBP8.75□□□□□ -1.01
CLSTN2-201ENST00000458420 NLRP2Q9NX02 1062 aa8.75□□□□□ -1.01
CLSTN2-201ENST00000458420 TPM3P06753 285 aa8.74□□□□□ -1.01
CLSTN2-201ENST00000458420 TTC16Q8NEE8 873 aa8.74□□□□□ -1.01
CLSTN2-201ENST00000458420 WDR78Q5VTH9 848 aa8.74□□□□□ -1.01
CLSTN2-201ENST00000458420 FAM184AQ8NB25 1140 aa8.74□□□□□ -1.01
CLSTN2-201ENST00000458420 CT47A1Q5JQC4 288 aaPredicted RBP8.74□□□□□ -1.01
CLSTN2-201ENST00000458420 SMC4Q9NTJ3 1288 aa8.73□□□□□ -1.01
CLSTN2-201ENST00000458420 CCDC34Q96HJ3 373 aa8.73□□□□□ -1.01
CLSTN2-201ENST00000458420 C9orf78Q9NZ63 289 aaPredicted RBP8.73□□□□□ -1.01
CLSTN2-201ENST00000458420 SLKQ9H2G2 1235 aaPredicted RBP8.73□□□□□ -1.01
CLSTN2-201ENST00000458420 NAP1L1P55209 391 aaKnown RBP8.73□□□□□ -1.01
CLSTN2-201ENST00000458420 IPO8O15397 1037 aaKnown RBP8.72□□□□□ -1.01
CLSTN2-201ENST00000458420 ESCO1Q5FWF5 840 aa8.72□□□□□ -1.01
CLSTN2-201ENST00000458420 MPHOSPH10O00566 681 aaKnown RBP8.72□□□□□ -1.01
CLSTN2-201ENST00000458420 GOLGA6L1Q8N7Z2 621 aa8.72□□□□□ -1.01
CLSTN2-201ENST00000458420 MINK1Q8N4C8 1332 aaPredicted RBP8.72□□□□□ -1.01
CLSTN2-201ENST00000458420 ZSCAN29Q8IWY8 852 aaPredicted RBP8.72□□□□□ -1.01
CLSTN2-201ENST00000458420 COG3Q96JB2 828 aa8.72□□□□□ -1.01
CLSTN2-201ENST00000458420 ADAMTS2O95450 1211 aa8.72□□□□□ -1.01
CLSTN2-201ENST00000458420 SKIDA1Q1XH10 827 aa8.71□□□□□ -1.01
CLSTN2-201ENST00000458420 CLIP1P30622 1438 aa8.71□□□□□ -1.02
CLSTN2-201ENST00000458420 DDX54Q8TDD1 881 aaKnown RBP8.71□□□□□ -1.02
CLSTN2-201ENST00000458420 TPM2P07951 284 aa8.71□□□□□ -1.02
CLSTN2-201ENST00000458420 PDE3BQ13370 1112 aa8.71□□□□□ -1.02
CLSTN2-201ENST00000458420 ERICH2A1L162 156 aa8.7□□□□□ -1.02
CLSTN2-201ENST00000458420 HTATSF1O43719 755 aaKnown RBP8.7□□□□□ -1.02
CLSTN2-201ENST00000458420 MATR3P43243 847 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLSTN2-201ENST00000458420 NEUROD6Q96NK8 337 aa8.7□□□□□ -1.02
CLSTN2-201ENST00000458420 TERF2IPQ9NYB0 399 aa8.7□□□□□ -1.02
CLSTN2-201ENST00000458420 ROCK2O75116 1388 aaKnown RBP8.7□□□□□ -1.02
CLSTN2-201ENST00000458420 TSR1Q2NL82 804 aaKnown RBP8.7□□□□□ -1.02
CLSTN2-201ENST00000458420 KIF16BQ96L93 1317 aa8.7□□□□□ -1.02
CLSTN2-201ENST00000458420 PKD2Q13563 968 aa8.7□□□□□ -1.02
CLSTN2-201ENST00000458420 NEXNQ0ZGT2 675 aa8.7□□□□□ -1.02
CLSTN2-201ENST00000458420 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms