RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 ZMYM3Q14202 1370 aa18.6■□□□□ 0.57
CNOT3-205ENST00000457463 CLTCQ00610 1675 aaKnown RBP18.6■□□□□ 0.57
CNOT3-205ENST00000457463 MROH1Q8NDA8 1641 aa18.6■□□□□ 0.57
CNOT3-205ENST00000457463 EIF2AK4Q9P2K8 1649 aaKnown RBP18.59■□□□□ 0.57
CNOT3-205ENST00000457463 CNTLNQ9NXG0 1405 aa18.58■□□□□ 0.57
CNOT3-205ENST00000457463 ROCK1Q13464 1354 aa18.58■□□□□ 0.57
CNOT3-205ENST00000457463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.562e-7■■■■□ 20.4
CNOT3-205ENST00000457463 RNF17Q9BXT8 1623 aaKnown RBP18.58■□□□□ 0.56
CNOT3-205ENST00000457463 ANKRD50Q9ULJ7 1429 aa18.57■□□□□ 0.56
CNOT3-205ENST00000457463 C3P01024 1663 aa18.57■□□□□ 0.56
CNOT3-205ENST00000457463 WASHC2CQ9Y4E1 1318 aa18.57■□□□□ 0.56
CNOT3-205ENST00000457463 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
CNOT3-205ENST00000457463 KDM5DQ9BY66 1539 aa18.54■□□□□ 0.56
CNOT3-205ENST00000457463 FBXO31Q5XUX0 539 aaPredicted RBP18.53■□□□□ 0.56
CNOT3-205ENST00000457463 ABCC3O15438 1527 aa18.53■□□□□ 0.56
CNOT3-205ENST00000457463 MROH2AA6NES4 1674 aa18.52■□□□□ 0.56
CNOT3-205ENST00000457463 PRDM15P57071 1507 aaPredicted RBP18.51■□□□□ 0.55
CNOT3-205ENST00000457463 DEPDC5O75140 1603 aa18.51■□□□□ 0.55
CNOT3-205ENST00000457463 LMTK3Q96Q04 1460 aa18.5■□□□□ 0.55
CNOT3-205ENST00000457463 NAIPQ13075 1403 aa18.49■□□□□ 0.55
CNOT3-205ENST00000457463 CEP152O94986 1710 aa18.49■□□□□ 0.55
CNOT3-205ENST00000457463 HSPA2P54652 639 aa18.48■□□□□ 0.55
CNOT3-205ENST00000457463 FAM135AQ9P2D6 1515 aa18.48■□□□□ 0.55
CNOT3-205ENST00000457463 VWDEQ8N2E2 1590 aa18.47■□□□□ 0.55
CNOT3-205ENST00000457463 PZPP20742 1482 aa18.46■□□□□ 0.55
CNOT3-205ENST00000457463 NPATQ14207 1427 aa18.45■□□□□ 0.54
CNOT3-205ENST00000457463 ZC3H13Q5T200 1668 aaKnown RBP18.44■□□□□ 0.54
CNOT3-205ENST00000457463 KANK1Q14678 1352 aa18.44■□□□□ 0.54
CNOT3-205ENST00000457463 HFM1A2PYH4 1435 aa18.44■□□□□ 0.54
CNOT3-205ENST00000457463 CAMSAP1Q5T5Y3 1602 aa18.44■□□□□ 0.54
CNOT3-205ENST00000457463 UNC13BO14795 1591 aa18.43■□□□□ 0.54
CNOT3-205ENST00000457463 UHRF1BP1Q6BDS2 1440 aa18.42■□□□□ 0.54
CNOT3-205ENST00000457463 LMTK2Q8IWU2 1503 aa18.42■□□□□ 0.54
CNOT3-205ENST00000457463 PREX1Q8TCU6 1659 aa18.41■□□□□ 0.54
CNOT3-205ENST00000457463 NUP155O75694 1391 aa18.41■□□□□ 0.54
CNOT3-205ENST00000457463 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
CNOT3-205ENST00000457463 TNRQ92752 1358 aa18.4■□□□□ 0.54
CNOT3-205ENST00000457463 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.53
CNOT3-205ENST00000457463 ERVK-7P63135 1459 aa18.39■□□□□ 0.53
CNOT3-205ENST00000457463 SETD1BQ9UPS6 1966 aaKnown RBP18.38■□□□□ 0.53
CNOT3-205ENST00000457463 MYO3AQ8NEV4 1616 aa18.38■□□□□ 0.53
CNOT3-205ENST00000457463 SPATA31D1Q6ZQQ2 1576 aa18.37■□□□□ 0.53
CNOT3-205ENST00000457463 EFCAB6Q5THR3 1501 aa18.36■□□□□ 0.53
CNOT3-205ENST00000457463 CFAP65Q6ZU64 1925 aaKnown RBP18.35■□□□□ 0.53
CNOT3-205ENST00000457463 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
CNOT3-205ENST00000457463 TRIM52Q96A61 297 aa18.34■□□□□ 0.53
CNOT3-205ENST00000457463 CEP170BQ9Y4F5 1589 aaPredicted RBP18.33■□□□□ 0.52
CNOT3-205ENST00000457463 TET3O43151 1660 aa18.32■□□□□ 0.52
CNOT3-205ENST00000457463 A2ML1A8K2U0 1454 aa18.32■□□□□ 0.52
CNOT3-205ENST00000457463 NOS1P29475 1434 aa18.32■□□□□ 0.52
CNOT3-205ENST00000457463 SETD5Q9C0A6 1442 aa18.31■□□□□ 0.52
CNOT3-205ENST00000457463 E9PCH4 1651 aa18.3■□□□□ 0.52
CNOT3-205ENST00000457463 SYNMO15061 1565 aa18.3■□□□□ 0.52
CNOT3-205ENST00000457463 ZNF142P52746 1687 aaPredicted RBP18.29■□□□□ 0.52
CNOT3-205ENST00000457463 RAB3GAP2Q9H2M9 1393 aa18.29■□□□□ 0.52
CNOT3-205ENST00000457463 NLRP1Q9C000 1473 aa18.28■□□□□ 0.52
CNOT3-205ENST00000457463 IDI1Q13907 227 aa18.28■□□□□ 0.52
CNOT3-205ENST00000457463 RPRD2Q5VT52 1461 aaKnown RBP18.27■□□□□ 0.52
CNOT3-205ENST00000457463 NCKAP5LQ9HCH0 1330 aa18.26■□□□□ 0.51
CNOT3-205ENST00000457463 SLC4A1APQ9BWU0 796 aaKnown RBP18.25■□□□□ 0.51
CNOT3-205ENST00000457463 UGGT1Q9NYU2 1555 aa18.25■□□□□ 0.51
CNOT3-205ENST00000457463 STRCQ7RTU9 1775 aa18.25■□□□□ 0.51
CNOT3-205ENST00000457463 PKD2Q13563 968 aa18.24■□□□□ 0.51
CNOT3-205ENST00000457463 FOXD1Q16676 465 aa18.24■□□□□ 0.51
CNOT3-205ENST00000457463 PIK3C2BO00750 1634 aa18.23■□□□□ 0.51
CNOT3-205ENST00000457463 THEMISQ8N1K5 641 aaPredicted RBP18.21■□□□□ 0.51
CNOT3-205ENST00000457463 MPHOSPH9Q99550 1183 aa18.21■□□□□ 0.51
CNOT3-205ENST00000457463 SLC52A1Q9NWF4 448 aa18.2■□□□□ 0.5
CNOT3-205ENST00000457463 UBR1Q8IWV7 1749 aa18.2■□□□□ 0.5
CNOT3-205ENST00000457463 PLA2R1Q13018 1463 aa18.2■□□□□ 0.5
CNOT3-205ENST00000457463 PTPRTO14522 1441 aa18.19■□□□□ 0.5
CNOT3-205ENST00000457463 STAG3Q9UJ98 1225 aa18.18■□□□□ 0.5
CNOT3-205ENST00000457463 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
CNOT3-205ENST00000457463 LTKP29376 864 aa18.16■□□□□ 0.5
CNOT3-205ENST00000457463 ADGRB3O60242 1522 aa18.15■□□□□ 0.5
CNOT3-205ENST00000457463 TRIM26Q12899 539 aaPredicted RBP18.15■□□□□ 0.5
CNOT3-205ENST00000457463 ANKLE2Q86XL3 938 aa18.15■□□□□ 0.5
CNOT3-205ENST00000457463 SPHKAPQ2M3C7 1700 aa18.15■□□□□ 0.5
CNOT3-205ENST00000457463 NEURL4Q96JN8 1562 aa18.14■□□□□ 0.49
CNOT3-205ENST00000457463 TMEM2Q9UHN6 1383 aa18.14■□□□□ 0.49
CNOT3-205ENST00000457463 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.49
CNOT3-205ENST00000457463 TXNDC2Q86VQ3 553 aa18.13■□□□□ 0.49
CNOT3-205ENST00000457463 HRCP23327 699 aa18.12■□□□□ 0.49
CNOT3-205ENST00000457463 SLIT1O75093 1534 aa18.12■□□□□ 0.49
CNOT3-205ENST00000457463 TRPM2O94759 1503 aa18.12■□□□□ 0.49
CNOT3-205ENST00000457463 TMEM131LA2VDJ0 1609 aa18.12■□□□□ 0.49
CNOT3-205ENST00000457463 CLTCL1P53675 1640 aa18.12■□□□□ 0.49
CNOT3-205ENST00000457463 DMRT2Q9Y5R5 561 aa18.11■□□□□ 0.49
CNOT3-205ENST00000457463 NUTM2DQ5VT03 806 aaPredicted RBP18.1■□□□□ 0.49
CNOT3-205ENST00000457463 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
CNOT3-205ENST00000457463 MYO5BQ9ULV0 1848 aa18.09■□□□□ 0.49
CNOT3-205ENST00000457463 POLR1AO95602 1720 aaPredicted RBP18.09■□□□□ 0.49
CNOT3-205ENST00000457463 KDM5AP29375 1690 aaKnown RBP18.09■□□□□ 0.49
CNOT3-205ENST00000457463 SCAF11Q99590 1463 aaKnown RBP18.08■□□□□ 0.49
CNOT3-205ENST00000457463 NPHP4O75161 1426 aaPredicted RBP18.08■□□□□ 0.49
CNOT3-205ENST00000457463 MED14O60244 1454 aa18.07■□□□□ 0.48
CNOT3-205ENST00000457463 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
CNOT3-205ENST00000457463 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
CNOT3-205ENST00000457463 RIMS2Q9UQ26 1411 aa18.06■□□□□ 0.48
CNOT3-205ENST00000457463 EID1Q9Y6B2 187 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms