RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 NPM1P06748 294 aaKnown RBP eCLIP9.48□□□□□ -0.89
CUBNP3-201ENST00000457461 KCNH8Q96L42 1107 aa9.48□□□□□ -0.89
CUBNP3-201ENST00000457461 ZNF777Q9ULD5 760 aaPredicted RBP9.47□□□□□ -0.89
CUBNP3-201ENST00000457461 ANKRD30AQ9BXX3 1397 aa9.47□□□□□ -0.89
CUBNP3-201ENST00000457461 FANCAO15360 1455 aa9.47□□□□□ -0.89
CUBNP3-201ENST00000457461 AAMPQ13685 434 aa9.47□□□□□ -0.89
CUBNP3-201ENST00000457461 EFCAB2Q5VUJ9 269 aa9.47□□□□□ -0.89
CUBNP3-201ENST00000457461 CHIC2Q9UKJ5 165 aa9.46□□□□□ -0.9
CUBNP3-201ENST00000457461 RBM19Q9Y4C8 960 aaKnown RBP9.46□□□□□ -0.9
CUBNP3-201ENST00000457461 DENND4BO75064 1496 aaPredicted RBP9.46□□□□□ -0.9
CUBNP3-201ENST00000457461 DIP2BQ9P265 1576 aa9.46□□□□□ -0.9
CUBNP3-201ENST00000457461 INO80Q9ULG1 1556 aaPredicted RBP9.46□□□□□ -0.9
CUBNP3-201ENST00000457461 DCAF8L1A6NGE4 600 aa9.45□□□□□ -0.9
CUBNP3-201ENST00000457461 CYB5RLQ6IPT4 315 aa9.45□□□□□ -0.9
CUBNP3-201ENST00000457461 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
CUBNP3-201ENST00000457461 RRP7BPQ9NSQ0 103 aa9.45□□□□□ -0.9
CUBNP3-201ENST00000457461 ZFYVE16Q7Z3T8 1539 aa9.45□□□□□ -0.9
CUBNP3-201ENST00000457461 KDM5DQ9BY66 1539 aa9.45□□□□□ -0.9
CUBNP3-201ENST00000457461 HNRNPMP52272 730 aaKnown RBP eCLIP9.45□□□□□ -0.9
CUBNP3-201ENST00000457461 RTN4Q9NQC3 1192 aaKnown RBP9.45□□□□□ -0.9
CUBNP3-201ENST00000457461 RTEL1-TNFRSF6BF6WH68 1400 aa9.44□□□□□ -0.9
CUBNP3-201ENST00000457461 TRAPPC8Q9Y2L5 1435 aa9.44□□□□□ -0.9
CUBNP3-201ENST00000457461 C11orf95C9JLR9 678 aaPredicted RBP9.44□□□□□ -0.9
CUBNP3-201ENST00000457461 CCDC136Q96JN2 1154 aa9.44□□□□□ -0.9
CUBNP3-201ENST00000457461 ZMYND15Q9H091 742 aa9.44□□□□□ -0.9
CUBNP3-201ENST00000457461 CD109Q6YHK3 1445 aa9.43□□□□□ -0.9
CUBNP3-201ENST00000457461 ANKRD50Q9ULJ7 1429 aa9.43□□□□□ -0.9
CUBNP3-201ENST00000457461 KDM5CP41229 1560 aa9.43□□□□□ -0.9
CUBNP3-201ENST00000457461 NEO1Q92859 1461 aa9.43□□□□□ -0.9
CUBNP3-201ENST00000457461 UNC13BO14795 1591 aa9.43□□□□□ -0.9
CUBNP3-201ENST00000457461 ADGRL1O94910 1474 aa9.43□□□□□ -0.9
CUBNP3-201ENST00000457461 KIF15Q9NS87 1388 aa9.42□□□□□ -0.9
CUBNP3-201ENST00000457461 TSPY4P0CV99 314 aa9.42□□□□□ -0.9
CUBNP3-201ENST00000457461 TSPY10P0CW01 314 aa9.42□□□□□ -0.9
CUBNP3-201ENST00000457461 PPRC1Q5VV67 1664 aaKnown RBP9.42□□□□□ -0.9
CUBNP3-201ENST00000457461 KIF13AQ9H1H9 1805 aa9.42□□□□□ -0.9
CUBNP3-201ENST00000457461 DUOX2Q9NRD8 1548 aa9.42□□□□□ -0.9
CUBNP3-201ENST00000457461 PZPP20742 1482 aa9.41□□□□□ -0.9
CUBNP3-201ENST00000457461 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
CUBNP3-201ENST00000457461 MAGI2Q86UL8 1455 aa9.41□□□□□ -0.9
CUBNP3-201ENST00000457461 KIDINS220Q9ULH0 1771 aa9.41□□□□□ -0.9
CUBNP3-201ENST00000457461 ATP7AQ04656 1500 aa9.4□□□□□ -0.9
CUBNP3-201ENST00000457461 RICTORQ6R327 1708 aa9.4□□□□□ -0.91
CUBNP3-201ENST00000457461 ERBINQ96RT1 1412 aa9.4□□□□□ -0.91
CUBNP3-201ENST00000457461 SCAPERQ9BY12 1400 aa9.4□□□□□ -0.91
CUBNP3-201ENST00000457461 YTHDC1Q96MU7 727 aaKnown RBP9.4□□□□□ -0.91
CUBNP3-201ENST00000457461 ZNF518AQ6AHZ1 1483 aa9.39□□□□□ -0.91
CUBNP3-201ENST00000457461 POGZQ7Z3K3 1410 aa9.39□□□□□ -0.91
CUBNP3-201ENST00000457461 DEPDC5O75140 1603 aa9.39□□□□□ -0.91
CUBNP3-201ENST00000457461 EIF2AK4Q9P2K8 1649 aaKnown RBP9.38□□□□□ -0.91
CUBNP3-201ENST00000457461 BRD2P25440 801 aaKnown RBP9.38□□□□□ -0.91
CUBNP3-201ENST00000457461 IQGAP3Q86VI3 1631 aa9.38□□□□□ -0.91
CUBNP3-201ENST00000457461 HECW2Q9P2P5 1572 aa9.37□□□□□ -0.91
CUBNP3-201ENST00000457461 BCORL1Q5H9F3 1711 aa9.37□□□□□ -0.91
CUBNP3-201ENST00000457461 MLH3Q9UHC1 1453 aa9.37□□□□□ -0.91
CUBNP3-201ENST00000457461 MYCNP04198 464 aaPredicted RBP9.37□□□□□ -0.91
CUBNP3-201ENST00000457461 FRMPD1Q5SYB0 1578 aa9.36□□□□□ -0.91
CUBNP3-201ENST00000457461 MPHOSPH9Q99550 1183 aa9.36□□□□□ -0.91
CUBNP3-201ENST00000457461 SPAG9O60271 1321 aaKnown RBP9.35□□□□□ -0.91
CUBNP3-201ENST00000457461 ZMYM4Q5VZL5 1548 aa9.35□□□□□ -0.91
CUBNP3-201ENST00000457461 RBM10P98175 930 aaKnown RBP9.35□□□□□ -0.91
CUBNP3-201ENST00000457461 AFAP1Q8N556 730 aa9.35□□□□□ -0.91
CUBNP3-201ENST00000457461 BCL11BQ9C0K0 894 aaPredicted RBP9.35□□□□□ -0.91
CUBNP3-201ENST00000457461 ANKRD30BQ9BXX2 1392 aa9.34□□□□□ -0.91
CUBNP3-201ENST00000457461 FAM135AQ9P2D6 1515 aa9.34□□□□□ -0.91
CUBNP3-201ENST00000457461 VWDEQ8N2E2 1590 aa9.34□□□□□ -0.91
CUBNP3-201ENST00000457461 TSPOAP1O95153 1857 aa9.34□□□□□ -0.91
CUBNP3-201ENST00000457461 ABCA6Q8N139 1617 aa9.34□□□□□ -0.91
CUBNP3-201ENST00000457461 RNF17Q9BXT8 1623 aaKnown RBP9.34□□□□□ -0.91
CUBNP3-201ENST00000457461 TEX14Q8IWB6 1497 aa9.34□□□□□ -0.91
CUBNP3-201ENST00000457461 ZNF316A6NFI3 1004 aaPredicted RBP9.34□□□□□ -0.91
CUBNP3-201ENST00000457461 MROH1Q8NDA8 1641 aa9.33□□□□□ -0.92
CUBNP3-201ENST00000457461 TRIM52Q96A61 297 aa9.33□□□□□ -0.92
CUBNP3-201ENST00000457461 FBXO3Q9UK99 471 aa9.33□□□□□ -0.92
CUBNP3-201ENST00000457461 PRDM15P57071 1507 aaPredicted RBP9.33□□□□□ -0.92
CUBNP3-201ENST00000457461 RPRD2Q5VT52 1461 aaKnown RBP9.32□□□□□ -0.92
CUBNP3-201ENST00000457461 NUP155O75694 1391 aa9.32□□□□□ -0.92
CUBNP3-201ENST00000457461 SIN3AQ96ST3 1273 aa9.32□□□□□ -0.92
CUBNP3-201ENST00000457461 DIP2CQ9Y2E4 1556 aa9.32□□□□□ -0.92
CUBNP3-201ENST00000457461 DHX29Q7Z478 1369 aaKnown RBP9.31□□□□□ -0.92
CUBNP3-201ENST00000457461 FAM69CQ0P6D2 419 aa9.31□□□□□ -0.92
CUBNP3-201ENST00000457461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.3□□□□□ -0.92
CUBNP3-201ENST00000457461 TET3O43151 1660 aa9.3□□□□□ -0.92
CUBNP3-201ENST00000457461 ATP10AO60312 1499 aa9.3□□□□□ -0.92
CUBNP3-201ENST00000457461 A2MP01023 1474 aa9.3□□□□□ -0.92
CUBNP3-201ENST00000457461 REREQ9P2R6 1566 aa9.29□□□□□ -0.92
CUBNP3-201ENST00000457461 TULP1O00294 542 aaPredicted RBP9.29□□□□□ -0.92
CUBNP3-201ENST00000457461 LMTK2Q8IWU2 1503 aa9.28□□□□□ -0.92
CUBNP3-201ENST00000457461 E9PCH4 1651 aa9.28□□□□□ -0.92
CUBNP3-201ENST00000457461 NPM2Q86SE8 214 aaKnown RBP9.27□□□□□ -0.92
CUBNP3-201ENST00000457461 VSIG10Q8N0Z9 540 aa9.27□□□□□ -0.92
CUBNP3-201ENST00000457461 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.27□□□□□ -0.92
CUBNP3-201ENST00000457461 PKD2Q13563 968 aa9.27□□□□□ -0.93
CUBNP3-201ENST00000457461 BCCIPQ9P287 314 aaKnown RBP eCLIP9.27□□□□□ -0.93
CUBNP3-201ENST00000457461 SPHKAPQ2M3C7 1700 aa9.26□□□□□ -0.93
CUBNP3-201ENST00000457461 RRP9O43818 475 aaKnown RBP9.26□□□□□ -0.93
CUBNP3-201ENST00000457461 TONSLQ96HA7 1378 aa9.26□□□□□ -0.93
CUBNP3-201ENST00000457461 PLA2R1Q13018 1463 aa9.26□□□□□ -0.93
CUBNP3-201ENST00000457461 CEP152O94986 1710 aa9.25□□□□□ -0.93
CUBNP3-201ENST00000457461 PPP1R15AO75807 674 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms