RNA–Protein interactions for RNA: ENST00000456491.5

GIGYF2-223, Transcript of GRB10 interacting GYF protein 2, human

TSL 4

Gene GIGYF2, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GIGYF2-223	ENST00000456491	CEP164	Q9UPV0	1460 aa		13.93	□□□□□ -0.18
GIGYF2-223	ENST00000456491	ARHGEF11	O15085	1522 aa		13.9	□□□□□ -0.18
GIGYF2-223	ENST00000456491	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.9	□□□□□ -0.18
GIGYF2-223	ENST00000456491	POTEE	Q6S8J3	1075 aa		13.9	□□□□□ -0.18
GIGYF2-223	ENST00000456491	PTGER2	P43116	358 aa		13.89	□□□□□ -0.19
GIGYF2-223	ENST00000456491	FOSB	P53539	338 aa		13.89	□□□□□ -0.19
GIGYF2-223	ENST00000456491	P3H3	Q8IVL6	736 aa		13.89	□□□□□ -0.19
GIGYF2-223	ENST00000456491	CDAN1	Q8IWY9	1227 aa		13.89	□□□□□ -0.19
GIGYF2-223	ENST00000456491	MROH2B	Q7Z745	1585 aa		13.88	□□□□□ -0.19
GIGYF2-223	ENST00000456491	ZNF687	Q8N1G0	1237 aa		13.88	□□□□□ -0.19
GIGYF2-223	ENST00000456491	SLC24A1	O60721	1099 aa		13.87	□□□□□ -0.19
GIGYF2-223	ENST00000456491	PCDHGA10	Q9Y5H3	936 aa		13.87	□□□□□ -0.19
GIGYF2-223	ENST00000456491	JPH4	Q96JJ6	628 aa		13.85	□□□□□ -0.19
GIGYF2-223	ENST00000456491	FANCD2	Q9BXW9	1451 aa		13.85	□□□□□ -0.19
GIGYF2-223	ENST00000456491	ZNF454	Q8N9F8	522 aa		13.84	□□□□□ -0.19
GIGYF2-223	ENST00000456491	DDX12P	Q92771	950 aa		13.84	□□□□□ -0.19
GIGYF2-223	ENST00000456491	KRTAP3-3	Q9BYR6	98 aa		13.84	□□□□□ -0.19
GIGYF2-223	ENST00000456491	KRTAP3-2	Q9BYR7	98 aa		13.84	□□□□□ -0.19
GIGYF2-223	ENST00000456491	PSD	A5PKW4	1024 aa	Predicted RBP	13.83	□□□□□ -0.2
GIGYF2-223	ENST00000456491	CYB5RL	Q6IPT4	315 aa		13.82	□□□□□ -0.2
GIGYF2-223	ENST00000456491	PHF14	O94880	888 aa		13.81	□□□□□ -0.2
GIGYF2-223	ENST00000456491	PRIM1	P49642	420 aa	Known RBP	13.81	□□□□□ -0.2
GIGYF2-223	ENST00000456491	SEMA3E	O15041	775 aa		13.8	□□□□□ -0.2
GIGYF2-223	ENST00000456491	MLLT3	P42568	568 aa	Predicted RBP	13.8	□□□□□ -0.2
GIGYF2-223	ENST00000456491	PPP4R3B	Q5MIZ7	849 aa		13.8	□□□□□ -0.2
GIGYF2-223	ENST00000456491	ADAM33	Q9BZ11	813 aa		13.8	□□□□□ -0.2
GIGYF2-223	ENST00000456491	ZDHHC16	Q969W1	377 aa		13.78	□□□□□ -0.2
GIGYF2-223	ENST00000456491	AXIN2	Q9Y2T1	843 aa		13.78	□□□□□ -0.2
GIGYF2-223	ENST00000456491	URB2	Q14146	1524 aa	Known RBP	13.78	□□□□□ -0.2
GIGYF2-223	ENST00000456491	GRXCR2	A6NFK2	248 aa		13.76	□□□□□ -0.21
GIGYF2-223	ENST00000456491	PCDH10	Q9P2E7	1040 aa		13.76	□□□□□ -0.21
GIGYF2-223	ENST00000456491	OSBP	P22059	807 aa		13.75	□□□□□ -0.21
GIGYF2-223	ENST00000456491	TYW1B	Q6NUM6	668 aa		13.75	□□□□□ -0.21
GIGYF2-223	ENST00000456491	BCL2L12	Q9HB09	334 aa		13.75	□□□□□ -0.21
GIGYF2-223	ENST00000456491	PSEN2	P49810	448 aa		13.74	□□□□□ -0.21
GIGYF2-223	ENST00000456491	EPAS1	Q99814	870 aa		13.74	□□□□□ -0.21
GIGYF2-223	ENST00000456491	ARAP1	Q96P48	1450 aa		13.74	□□□□□ -0.21
GIGYF2-223	ENST00000456491	TESPA1	A2RU30	521 aa	Predicted RBP	13.72	□□□□□ -0.21
GIGYF2-223	ENST00000456491	NBR1	Q14596	966 aa		13.72	□□□□□ -0.21
GIGYF2-223	ENST00000456491	CFTR	P13569	1480 aa		13.72	□□□□□ -0.21
GIGYF2-223	ENST00000456491	ARHGAP33	O14559	1287 aa		13.71	□□□□□ -0.21
GIGYF2-223	ENST00000456491	DMRTA1	Q5VZB9	504 aa		13.71	□□□□□ -0.21
GIGYF2-223	ENST00000456491	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.7	□□□□□ -0.22
GIGYF2-223	ENST00000456491	PBX2	P40425	430 aa		13.7	□□□□□ -0.22
GIGYF2-223	ENST00000456491	FBXW7	Q969H0	707 aa		13.7	□□□□□ -0.22
GIGYF2-223	ENST00000456491	WIZ	O95785	1651 aa		13.69	□□□□□ -0.22
GIGYF2-223	ENST00000456491	EN1	Q05925	392 aa	Predicted RBP	13.69	□□□□□ -0.22
GIGYF2-223	ENST00000456491	RBM33	Q96EV2	1170 aa	Known RBP	13.69	□□□□□ -0.22
GIGYF2-223	ENST00000456491	KCNK17	Q96T54	332 aa		13.68	□□□□□ -0.22
GIGYF2-223	ENST00000456491	TSR1	Q2NL82	804 aa	Known RBP	13.67	□□□□□ -0.22
GIGYF2-223	ENST00000456491	C6orf132	Q5T0Z8	1188 aa		13.67	□□□□□ -0.22
GIGYF2-223	ENST00000456491	COL9A1	P20849	921 aa		13.66	□□□□□ -0.22
GIGYF2-223	ENST00000456491	IFT140	Q96RY7	1462 aa		13.66	□□□□□ -0.22
GIGYF2-223	ENST00000456491	PTPRE	P23469	700 aa		13.65	□□□□□ -0.22
GIGYF2-223	ENST00000456491	LSM11	P83369	360 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
GIGYF2-223	ENST00000456491	CHD1	O14646	1710 aa		13.63	□□□□□ -0.23
GIGYF2-223	ENST00000456491	RSF1	Q96T23	1441 aa	Predicted RBP	13.62	□□□□□ -0.23
GIGYF2-223	ENST00000456491	EIF4G3	O43432	1585 aa	Known RBP	13.62	□□□□□ -0.23
GIGYF2-223	ENST00000456491	MAP3K7	O43318	606 aa		13.61	□□□□□ -0.23
GIGYF2-223	ENST00000456491	CDHR5	Q9HBB8	845 aa		13.61	□□□□□ -0.23
GIGYF2-223	ENST00000456491	ANKRD13D	Q6ZTN6	518 aa		13.6	□□□□□ -0.23
GIGYF2-223	ENST00000456491	ZBED2	Q9BTP6	218 aa		13.59	□□□□□ -0.23
GIGYF2-223	ENST00000456491	PPP1R3G	B7ZBB8	358 aa		13.58	□□□□□ -0.24
GIGYF2-223	ENST00000456491	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.58	□□□□□ -0.24
GIGYF2-223	ENST00000456491	RBM26	Q5T8P6	1007 aa	Known RBP	13.57	□□□□□ -0.24
GIGYF2-223	ENST00000456491	SPNS2	Q8IVW8	549 aa		13.56	□□□□□ -0.24
GIGYF2-223	ENST00000456491	PRDM2	Q13029	1718 aa		13.56	□□□□□ -0.24
GIGYF2-223	ENST00000456491	ADGRD1	Q6QNK2	874 aa		13.55	□□□□□ -0.24
GIGYF2-223	ENST00000456491	SLC4A5	Q9BY07	1137 aa		13.55	□□□□□ -0.24
GIGYF2-223	ENST00000456491	VPS9D1	Q9Y2B5	631 aa		13.55	□□□□□ -0.24
GIGYF2-223	ENST00000456491	TK2	O00142	265 aa		13.54	□□□□□ -0.24
GIGYF2-223	ENST00000456491	PROX2	Q3B8N5	592 aa		13.54	□□□□□ -0.24
GIGYF2-223	ENST00000456491	HR	O43593	1189 aa		13.53	□□□□□ -0.24
GIGYF2-223	ENST00000456491	TOPBP1	Q92547	1522 aa		13.53	□□□□□ -0.24
GIGYF2-223	ENST00000456491	KCNH8	Q96L42	1107 aa		13.51	□□□□□ -0.25
GIGYF2-223	ENST00000456491	AQR	O60306	1485 aa	Known RBP eCLIP	13.5	□□□□□ -0.25	1e-13	■■■■□ 25.7
GIGYF2-223	ENST00000456491	SMYD5	Q6GMV2	418 aa		13.5	□□□□□ -0.25
GIGYF2-223	ENST00000456491	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.49	□□□□□ -0.25
GIGYF2-223	ENST00000456491	FAM198A	Q9UFP1	575 aa		13.49	□□□□□ -0.25
GIGYF2-223	ENST00000456491	TOP2A	P11388	1531 aa	Known RBP	13.48	□□□□□ -0.25
GIGYF2-223	ENST00000456491	PTGDR	Q13258	359 aa		13.47	□□□□□ -0.25
GIGYF2-223	ENST00000456491	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
GIGYF2-223	ENST00000456491	TSKS	Q9UJT2	592 aa		13.47	□□□□□ -0.25
GIGYF2-223	ENST00000456491	NUTM2F	A1L443	756 aa		13.46	□□□□□ -0.25
GIGYF2-223	ENST00000456491	GPR37	O15354	613 aa		13.46	□□□□□ -0.25
GIGYF2-223	ENST00000456491	CLASP1	Q7Z460	1538 aa		13.45	□□□□□ -0.26
GIGYF2-223	ENST00000456491	TRIM6-TRIM34	B2RNG4	842 aa		13.45	□□□□□ -0.26
GIGYF2-223	ENST00000456491	PRSS12	P56730	875 aa		13.45	□□□□□ -0.26
GIGYF2-223	ENST00000456491	CDCA7L	Q96GN5	454 aa		13.45	□□□□□ -0.26
GIGYF2-223	ENST00000456491	TARBP1	Q13395	1621 aa	Known RBP	13.45	□□□□□ -0.26
GIGYF2-223	ENST00000456491	C3orf80	F5H4A9	247 aa		13.44	□□□□□ -0.26
GIGYF2-223	ENST00000456491	CERK	Q8TCT0	537 aa		13.44	□□□□□ -0.26
GIGYF2-223	ENST00000456491	ABCC8	Q09428	1581 aa		13.44	□□□□□ -0.26
GIGYF2-223	ENST00000456491	ONECUT3	O60422	494 aa	Predicted RBP	13.43	□□□□□ -0.26
GIGYF2-223	ENST00000456491	TTC13	Q8NBP0	860 aa		13.43	□□□□□ -0.26
GIGYF2-223	ENST00000456491	KIAA1468	Q9P260	1216 aa		13.43	□□□□□ -0.26
GIGYF2-223	ENST00000456491	DNMBP	Q6XZF7	1577 aa		13.42	□□□□□ -0.26
GIGYF2-223	ENST00000456491	MMRN1	Q13201	1228 aa		13.42	□□□□□ -0.26
GIGYF2-223	ENST00000456491	RABGEF1	Q9UJ41	708 aa		13.41	□□□□□ -0.26
GIGYF2-223	ENST00000456491	PADI6	Q6TGC4	694 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms