RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 RNF17Q9BXT8 1623 aaKnown RBP24.71■■□□□ 1.55
CCDC90B-202ENST00000455220 KIF3BO15066 747 aa24.68■■□□□ 1.54
CCDC90B-202ENST00000455220 MROH1Q8NDA8 1641 aa24.68■■□□□ 1.54
CCDC90B-202ENST00000455220 KDM5DQ9BY66 1539 aa24.67■■□□□ 1.54
CCDC90B-202ENST00000455220 PRDM15P57071 1507 aaPredicted RBP24.66■■□□□ 1.54
CCDC90B-202ENST00000455220 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
CCDC90B-202ENST00000455220 NUP155O75694 1391 aa24.61■■□□□ 1.53
CCDC90B-202ENST00000455220 IQGAP3Q86VI3 1631 aa24.61■■□□□ 1.53
CCDC90B-202ENST00000455220 TRIM52Q96A61 297 aa24.6■■□□□ 1.53
CCDC90B-202ENST00000455220 PZPP20742 1482 aa24.6■■□□□ 1.53
CCDC90B-202ENST00000455220 FAM135AQ9P2D6 1515 aa24.58■■□□□ 1.52
CCDC90B-202ENST00000455220 KANK1Q14678 1352 aa24.56■■□□□ 1.52
CCDC90B-202ENST00000455220 GGT6Q6P531 493 aa24.56■■□□□ 1.52
CCDC90B-202ENST00000455220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.56■■□□□ 1.52
CCDC90B-202ENST00000455220 DHX57Q6P158 1386 aaKnown RBP24.55■■□□□ 1.52
CCDC90B-202ENST00000455220 LMTK2Q8IWU2 1503 aa24.55■■□□□ 1.52
CCDC90B-202ENST00000455220 ARID4BQ4LE39 1312 aaPredicted RBP24.54■■□□□ 1.52
CCDC90B-202ENST00000455220 PPP6R1Q9UPN7 881 aa24.54■■□□□ 1.52
CCDC90B-202ENST00000455220 ZC3H13Q5T200 1668 aaKnown RBP24.53■■□□□ 1.52
CCDC90B-202ENST00000455220 ABCC3O15438 1527 aa24.52■■□□□ 1.52
CCDC90B-202ENST00000455220 MPHOSPH9Q99550 1183 aa24.52■■□□□ 1.52
CCDC90B-202ENST00000455220 CEP152O94986 1710 aa24.51■■□□□ 1.51
CCDC90B-202ENST00000455220 TET3O43151 1660 aa24.5■■□□□ 1.51
CCDC90B-202ENST00000455220 SLC4A1APQ9BWU0 796 aaKnown RBP24.5■■□□□ 1.51
CCDC90B-202ENST00000455220 MLECQ14165 292 aa24.47■■□□□ 1.51
CCDC90B-202ENST00000455220 WASHC2CQ9Y4E1 1318 aa24.47■■□□□ 1.51
CCDC90B-202ENST00000455220 EFCAB6Q5THR3 1501 aa24.47■■□□□ 1.51
CCDC90B-202ENST00000455220 CAMSAP1Q5T5Y3 1602 aa24.45■■□□□ 1.5
CCDC90B-202ENST00000455220 CLTCQ00610 1675 aaKnown RBP24.43■■□□□ 1.5
CCDC90B-202ENST00000455220 E9PCH4 1651 aa24.43■■□□□ 1.5
CCDC90B-202ENST00000455220 PKD2Q13563 968 aa24.42■■□□□ 1.5
CCDC90B-202ENST00000455220 ARHGAP31Q2M1Z3 1444 aa24.42■■□□□ 1.5
CCDC90B-202ENST00000455220 CNTLNQ9NXG0 1405 aa24.42■■□□□ 1.5
CCDC90B-202ENST00000455220 ADAMTSL3P82987 1691 aa24.41■■□□□ 1.5
CCDC90B-202ENST00000455220 RPRD2Q5VT52 1461 aaKnown RBP24.4■■□□□ 1.5
CCDC90B-202ENST00000455220 FER1L4A9Z1Z3 1794 aa24.4■■□□□ 1.5
CCDC90B-202ENST00000455220 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
CCDC90B-202ENST00000455220 MROH2AA6NES4 1674 aa24.39■■□□□ 1.49
CCDC90B-202ENST00000455220 NPATQ14207 1427 aa24.39■■□□□ 1.49
CCDC90B-202ENST00000455220 CCER1Q8TC90 406 aaPredicted RBP24.37■■□□□ 1.49
CCDC90B-202ENST00000455220 FOXD1Q16676 465 aa24.36■■□□□ 1.49
CCDC90B-202ENST00000455220 MADDQ8WXG6 1647 aa24.36■■□□□ 1.49
CCDC90B-202ENST00000455220 CLSPNQ9HAW4 1339 aa24.36■■□□□ 1.49
CCDC90B-202ENST00000455220 ESF1Q9H501 851 aaKnown RBP24.35■■□□□ 1.49
CCDC90B-202ENST00000455220 ANKRD30BQ9BXX2 1392 aa24.34■■□□□ 1.49
CCDC90B-202ENST00000455220 PTPRTO14522 1441 aa24.33■■□□□ 1.49
CCDC90B-202ENST00000455220 ZMYM3Q14202 1370 aa24.33■■□□□ 1.49
CCDC90B-202ENST00000455220 PLA2R1Q13018 1463 aa24.32■■□□□ 1.48
CCDC90B-202ENST00000455220 SPHKAPQ2M3C7 1700 aa24.31■■□□□ 1.48
CCDC90B-202ENST00000455220 NOS1P29475 1434 aa24.29■■□□□ 1.48
CCDC90B-202ENST00000455220 TRPM2O94759 1503 aa24.29■■□□□ 1.48
CCDC90B-202ENST00000455220 RIMS1Q86UR5 1692 aaKnown RBP24.29■■□□□ 1.48
CCDC90B-202ENST00000455220 PREX1Q8TCU6 1659 aa24.28■■□□□ 1.48
CCDC90B-202ENST00000455220 C3P01024 1663 aa24.27■■□□□ 1.48
CCDC90B-202ENST00000455220 ERVK-7P63135 1459 aa24.27■■□□□ 1.48
CCDC90B-202ENST00000455220 SPATA31D1Q6ZQQ2 1576 aa24.27■■□□□ 1.48
CCDC90B-202ENST00000455220 CFAP65Q6ZU64 1925 aaKnown RBP24.26■■□□□ 1.47
CCDC90B-202ENST00000455220 SYNMO15061 1565 aa24.23■■□□□ 1.47
CCDC90B-202ENST00000455220 FBXO31Q5XUX0 539 aaPredicted RBP24.21■■□□□ 1.47
CCDC90B-202ENST00000455220 CCDC144AA2RUR9 1427 aa24.21■■□□□ 1.47
CCDC90B-202ENST00000455220 PIK3C2BO00750 1634 aa24.19■■□□□ 1.46
CCDC90B-202ENST00000455220 CLTCL1P53675 1640 aa24.19■■□□□ 1.46
CCDC90B-202ENST00000455220 PTPRMP28827 1452 aa24.18■■□□□ 1.46
CCDC90B-202ENST00000455220 SIN3AQ96ST3 1273 aa24.18■■□□□ 1.46
CCDC90B-202ENST00000455220 CEBPAP49715 358 aaPredicted RBP24.17■■□□□ 1.46
CCDC90B-202ENST00000455220 UGGT1Q9NYU2 1555 aa24.17■■□□□ 1.46
CCDC90B-202ENST00000455220 KDM4FA0A1W2PPD8 638 aa24.16■■□□□ 1.46
CCDC90B-202ENST00000455220 TNRQ92752 1358 aa24.14■■□□□ 1.46
CCDC90B-202ENST00000455220 SLC52A1Q9NWF4 448 aa24.14■■□□□ 1.45
CCDC90B-202ENST00000455220 NEURL4Q96JN8 1562 aa24.12■■□□□ 1.45
CCDC90B-202ENST00000455220 NEUROD1Q13562 356 aa24.1■■□□□ 1.45
CCDC90B-202ENST00000455220 IDI1Q13907 227 aa24.09■■□□□ 1.45
CCDC90B-202ENST00000455220 SPATA31E1Q6ZUB1 1445 aa24.09■■□□□ 1.45
CCDC90B-202ENST00000455220 KIF1BO60333 1816 aa24.09■■□□□ 1.45
CCDC90B-202ENST00000455220 NLRP1Q9C000 1473 aa24.08■■□□□ 1.45
CCDC90B-202ENST00000455220 ADGRB3O60242 1522 aa24.07■■□□□ 1.44
CCDC90B-202ENST00000455220 SETD1BQ9UPS6 1966 aaKnown RBP24.07■■□□□ 1.44
CCDC90B-202ENST00000455220 MYO3AQ8NEV4 1616 aa24.05■■□□□ 1.44
CCDC90B-202ENST00000455220 PLPPR3Q6T4P5 718 aa24.05■■□□□ 1.44
CCDC90B-202ENST00000455220 TIMELESSQ9UNS1 1208 aa24.04■■□□□ 1.44
CCDC90B-202ENST00000455220 TMEM131LA2VDJ0 1609 aa24.04■■□□□ 1.44
CCDC90B-202ENST00000455220 KDM5AP29375 1690 aaKnown RBP24.04■■□□□ 1.44
CCDC90B-202ENST00000455220 TONSLQ96HA7 1378 aa24.02■■□□□ 1.44
CCDC90B-202ENST00000455220 ZNF142P52746 1687 aaPredicted RBP23.99■■□□□ 1.43
CCDC90B-202ENST00000455220 A2ML1A8K2U0 1454 aa23.99■■□□□ 1.43
CCDC90B-202ENST00000455220 UBR1Q8IWV7 1749 aa23.99■■□□□ 1.43
CCDC90B-202ENST00000455220 MYO5BQ9ULV0 1848 aa23.99■■□□□ 1.43
CCDC90B-202ENST00000455220 CEP170BQ9Y4F5 1589 aaPredicted RBP23.97■■□□□ 1.43
CCDC90B-202ENST00000455220 ZEB1P37275 1124 aaPredicted RBP23.97■■□□□ 1.43
CCDC90B-202ENST00000455220 L3MBTL2Q969R5 705 aa23.97■■□□□ 1.43
CCDC90B-202ENST00000455220 CHGAP10645 457 aaKnown RBP23.95■■□□□ 1.43
CCDC90B-202ENST00000455220 RGL3Q3MIN7 710 aa23.95■■□□□ 1.42
CCDC90B-202ENST00000455220 IFT172Q9UG01 1749 aa23.94■■□□□ 1.42
CCDC90B-202ENST00000455220 UHRF1BP1Q6BDS2 1440 aa23.93■■□□□ 1.42
CCDC90B-202ENST00000455220 RPGRIP1LQ68CZ1 1315 aa23.92■■□□□ 1.42
CCDC90B-202ENST00000455220 STAG3Q9UJ98 1225 aa23.92■■□□□ 1.42
CCDC90B-202ENST00000455220 NEXMIFQ5QGS0 1516 aa23.92■■□□□ 1.42
CCDC90B-202ENST00000455220 PPLO60437 1756 aa23.91■■□□□ 1.42
CCDC90B-202ENST00000455220 ZNF326Q5BKZ1 582 aaKnown RBP23.9■■□□□ 1.42
CCDC90B-202ENST00000455220 STAC3Q96MF2 364 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms