RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 UHRF1BP1Q6BDS2 1440 aa38.26■■■■□ 3.72
MSH2-203ENST00000454849 PREX1Q8TCU6 1659 aa38.26■■■■□ 3.71
MSH2-203ENST00000454849 DUOX2Q9NRD8 1548 aa38.24■■■■□ 3.71
MSH2-203ENST00000454849 SETD1BQ9UPS6 1966 aaKnown RBP38.23■■■■□ 3.71
MSH2-203ENST00000454849 ANKRD30AQ9BXX3 1397 aa38.22■■■■□ 3.71
MSH2-203ENST00000454849 ITGAEP38570 1179 aa38.21■■■■□ 3.71
MSH2-203ENST00000454849 FBXO31Q5XUX0 539 aaPredicted RBP38.21■■■■□ 3.71
MSH2-203ENST00000454849 PTPRKQ15262 1439 aa38.21■■■■□ 3.71
MSH2-203ENST00000454849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.18■■■■□ 3.76e-7■□□□□ 9.4
MSH2-203ENST00000454849 KDM5DQ9BY66 1539 aa38.17■■■■□ 3.7
MSH2-203ENST00000454849 NPATQ14207 1427 aa38.17■■■■□ 3.7
MSH2-203ENST00000454849 NCOA1Q15788 1441 aa38.17■■■■□ 3.7
MSH2-203ENST00000454849 RNF17Q9BXT8 1623 aaKnown RBP38.13■■■■□ 3.69
MSH2-203ENST00000454849 EIF2AK4Q9P2K8 1649 aaKnown RBP38.12■■■■□ 3.69
MSH2-203ENST00000454849 ERBINQ96RT1 1412 aa38.11■■■■□ 3.69
MSH2-203ENST00000454849 MROH1Q8NDA8 1641 aa38.09■■■■□ 3.69
MSH2-203ENST00000454849 ABCC3O15438 1527 aa38.07■■■■□ 3.69
MSH2-203ENST00000454849 ADGRL2O95490 1459 aa38.06■■■■□ 3.68
MSH2-203ENST00000454849 PZPP20742 1482 aa38.03■■■■□ 3.68
MSH2-203ENST00000454849 FAM135AQ9P2D6 1515 aa38.02■■■■□ 3.68
MSH2-203ENST00000454849 TNRQ92752 1358 aa38.01■■■■□ 3.68
MSH2-203ENST00000454849 CEP152O94986 1710 aa37.99■■■■□ 3.67
MSH2-203ENST00000454849 MYO3AQ8NEV4 1616 aa37.98■■■■□ 3.67
MSH2-203ENST00000454849 ANKRD50Q9ULJ7 1429 aa37.95■■■■□ 3.67
MSH2-203ENST00000454849 STRCQ7RTU9 1775 aa37.93■■■■□ 3.66
MSH2-203ENST00000454849 PRDM15P57071 1507 aaPredicted RBP37.93■■■■□ 3.66
MSH2-203ENST00000454849 KANK1Q14678 1352 aa37.93■■■■□ 3.66
MSH2-203ENST00000454849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.93■■■■□ 3.66
MSH2-203ENST00000454849 ZC3H13Q5T200 1668 aaKnown RBP37.92■■■■□ 3.66
MSH2-203ENST00000454849 CEP170BQ9Y4F5 1589 aaPredicted RBP37.91■■■■□ 3.66
MSH2-203ENST00000454849 CFAP65Q6ZU64 1925 aaKnown RBP37.91■■■■□ 3.66
MSH2-203ENST00000454849 CAMSAP1Q5T5Y3 1602 aa37.9■■■■□ 3.66
MSH2-203ENST00000454849 NCKAP5LQ9HCH0 1330 aa37.9■■■■□ 3.66
MSH2-203ENST00000454849 RRBP1Q9P2E9 1410 aaKnown RBP37.89■■■■□ 3.66
MSH2-203ENST00000454849 DEPDC5O75140 1603 aa37.89■■■■□ 3.66
MSH2-203ENST00000454849 ROCK1Q13464 1354 aa37.87■■■■□ 3.65
MSH2-203ENST00000454849 A2ML1A8K2U0 1454 aa37.87■■■■□ 3.65
MSH2-203ENST00000454849 ZNF142P52746 1687 aaPredicted RBP37.84■■■■□ 3.65
MSH2-203ENST00000454849 ERVK-7P63135 1459 aa37.84■■■■□ 3.65
MSH2-203ENST00000454849 DMRT2Q9Y5R5 561 aa37.83■■■■□ 3.65
MSH2-203ENST00000454849 SPATA31D1Q6ZQQ2 1576 aa37.78■■■■□ 3.64
MSH2-203ENST00000454849 VWDEQ8N2E2 1590 aa37.77■■■■□ 3.64
MSH2-203ENST00000454849 ARHGAP31Q2M1Z3 1444 aa37.76■■■■□ 3.63
MSH2-203ENST00000454849 NLRP1Q9C000 1473 aa37.74■■■■□ 3.63
MSH2-203ENST00000454849 LMTK2Q8IWU2 1503 aa37.71■■■■□ 3.63
MSH2-203ENST00000454849 PTPRTO14522 1441 aa37.7■■■■□ 3.63
MSH2-203ENST00000454849 ILDR1Q86SU0 546 aaPredicted RBP37.7■■■■□ 3.63
MSH2-203ENST00000454849 THEMISQ8N1K5 641 aaPredicted RBP37.7■■■■□ 3.63
MSH2-203ENST00000454849 PKD2Q13563 968 aa37.69■■■■□ 3.62
MSH2-203ENST00000454849 PLA2R1Q13018 1463 aa37.69■■■■□ 3.62
MSH2-203ENST00000454849 UGGT1Q9NYU2 1555 aa37.68■■■■□ 3.62
MSH2-203ENST00000454849 EFCAB6Q5THR3 1501 aa37.64■■■■□ 3.62
MSH2-203ENST00000454849 NUP155O75694 1391 aa37.64■■■■□ 3.62
MSH2-203ENST00000454849 UNC13BO14795 1591 aa37.63■■■■□ 3.61
MSH2-203ENST00000454849 ANKLE2Q86XL3 938 aa37.61■■■■□ 3.61
MSH2-203ENST00000454849 IDI1Q13907 227 aa37.59■■■■□ 3.61
MSH2-203ENST00000454849 CERKQ8TCT0 537 aa37.59■■■■□ 3.61
MSH2-203ENST00000454849 NAIPQ13075 1403 aa37.57■■■■□ 3.6
MSH2-203ENST00000454849 STAG3Q9UJ98 1225 aa37.56■■■■□ 3.6
MSH2-203ENST00000454849 SYNMO15061 1565 aa37.54■■■■□ 3.6
MSH2-203ENST00000454849 TET3O43151 1660 aa37.53■■■■□ 3.6
MSH2-203ENST00000454849 NOS1P29475 1434 aa37.53■■■■□ 3.6
MSH2-203ENST00000454849 ZNF335Q9H4Z2 1342 aaPredicted RBP37.53■■■■□ 3.6
MSH2-203ENST00000454849 UBR1Q8IWV7 1749 aa37.5■■■■□ 3.59
MSH2-203ENST00000454849 PIK3C2BO00750 1634 aa37.5■■■■□ 3.59
MSH2-203ENST00000454849 NEURL4Q96JN8 1562 aa37.49■■■■□ 3.59
MSH2-203ENST00000454849 IQGAP3Q86VI3 1631 aa37.48■■■■□ 3.59
MSH2-203ENST00000454849 POLR1AO95602 1720 aaPredicted RBP37.47■■■■□ 3.59
MSH2-203ENST00000454849 RPRD2Q5VT52 1461 aaKnown RBP37.46■■■■□ 3.59
MSH2-203ENST00000454849 FBXO41Q8TF61 875 aa37.46■■■■□ 3.59
MSH2-203ENST00000454849 GCC2Q8IWJ2 1684 aa37.46■■■■□ 3.59
MSH2-203ENST00000454849 LTKP29376 864 aa37.45■■■■□ 3.59
MSH2-203ENST00000454849 TRIM52Q96A61 297 aa37.45■■■■□ 3.59
MSH2-203ENST00000454849 HFM1A2PYH4 1435 aa37.44■■■■□ 3.58
MSH2-203ENST00000454849 TXNDC2Q86VQ3 553 aa37.44■■■■□ 3.58
MSH2-203ENST00000454849 E9PCH4 1651 aa37.44■■■■□ 3.58
MSH2-203ENST00000454849 SLC52A1Q9NWF4 448 aa37.43■■■■□ 3.58
MSH2-203ENST00000454849 NPHP4O75161 1426 aaPredicted RBP37.43■■■■□ 3.58
MSH2-203ENST00000454849 LTBP4Q8N2S1 1624 aa37.4■■■■□ 3.58
MSH2-203ENST00000454849 CHGAP10645 457 aaKnown RBP37.39■■■■□ 3.58
MSH2-203ENST00000454849 SENP3Q9H4L4 574 aaPredicted RBP37.37■■■■□ 3.57
MSH2-203ENST00000454849 EID1Q9Y6B2 187 aa37.37■■■■□ 3.57
MSH2-203ENST00000454849 TMEM2Q9UHN6 1383 aa37.36■■■■□ 3.57
MSH2-203ENST00000454849 ARHGAP23Q9P227 1491 aa37.35■■■■□ 3.57
MSH2-203ENST00000454849 MED14O60244 1454 aa37.34■■■■□ 3.57
MSH2-203ENST00000454849 SCAF11Q99590 1463 aaKnown RBP37.34■■■■□ 3.57
MSH2-203ENST00000454849 SLIT1O75093 1534 aa37.33■■■■□ 3.57
MSH2-203ENST00000454849 ADGRB3O60242 1522 aa37.31■■■■□ 3.56
MSH2-203ENST00000454849 IQGAP1P46940 1657 aa37.29■■■■□ 3.56
MSH2-203ENST00000454849 SLC4A1APQ9BWU0 796 aaKnown RBP37.24■■■■□ 3.55
MSH2-203ENST00000454849 NUTM2DQ5VT03 806 aaPredicted RBP37.23■■■■□ 3.55
MSH2-203ENST00000454849 MYO5BQ9ULV0 1848 aa37.22■■■■□ 3.55
MSH2-203ENST00000454849 KDM5AP29375 1690 aaKnown RBP37.22■■■■□ 3.55
MSH2-203ENST00000454849 BCANQ96GW7 911 aa37.21■■■■□ 3.55
MSH2-203ENST00000454849 TMEM131LA2VDJ0 1609 aa37.2■■■■□ 3.55
MSH2-203ENST00000454849 FOXD1Q16676 465 aa37.19■■■■□ 3.54
MSH2-203ENST00000454849 SLC26A8Q96RN1 970 aa37.18■■■■□ 3.54
MSH2-203ENST00000454849 RIMS2Q9UQ26 1411 aa37.17■■■■□ 3.54
MSH2-203ENST00000454849 PPP1R15AO75807 674 aaPredicted RBP37.16■■■■□ 3.54
MSH2-203ENST00000454849 SPHKAPQ2M3C7 1700 aa37.14■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms