RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 MYT1LQ9UL68 1186 aa18.54■□□□□ 0.56
TSFM-204ENST00000454289 NEO1Q92859 1461 aa18.54■□□□□ 0.56
TSFM-204ENST00000454289 GLI2P10070 1586 aa18.53■□□□□ 0.56
TSFM-204ENST00000454289 DHX29Q7Z478 1369 aaKnown RBP18.53■□□□□ 0.56
TSFM-204ENST00000454289 EIF2AK4Q9P2K8 1649 aaKnown RBP18.53■□□□□ 0.56
TSFM-204ENST00000454289 HSPA5P11021 654 aaKnown RBP18.52■□□□□ 0.56
TSFM-204ENST00000454289 CCDC144AA2RUR9 1427 aa18.5■□□□□ 0.55
TSFM-204ENST00000454289 DDX10Q13206 875 aaKnown RBP18.5■□□□□ 0.55
TSFM-204ENST00000454289 VWDEQ8N2E2 1590 aa18.49■□□□□ 0.55
TSFM-204ENST00000454289 E9PCH4 1651 aa18.49■□□□□ 0.55
TSFM-204ENST00000454289 ATP10AO60312 1499 aa18.49■□□□□ 0.55
TSFM-204ENST00000454289 MLH3Q9UHC1 1453 aa18.49■□□□□ 0.55
TSFM-204ENST00000454289 EIF4G2P78344 907 aaKnown RBP eCLIP18.49■□□□□ 0.55
TSFM-204ENST00000454289 HECW2Q9P2P5 1572 aa18.49■□□□□ 0.55
TSFM-204ENST00000454289 MROH1Q8NDA8 1641 aa18.49■□□□□ 0.55
TSFM-204ENST00000454289 UHRF1BP1Q6BDS2 1440 aa18.48■□□□□ 0.55
TSFM-204ENST00000454289 DIP2BQ9P265 1576 aa18.47■□□□□ 0.55
TSFM-204ENST00000454289 KIF3BO15066 747 aa18.47■□□□□ 0.55
TSFM-204ENST00000454289 PRDM15P57071 1507 aaPredicted RBP18.47■□□□□ 0.55
TSFM-204ENST00000454289 A2MP01023 1474 aa18.46■□□□□ 0.55
TSFM-204ENST00000454289 TET3O43151 1660 aa18.46■□□□□ 0.55
TSFM-204ENST00000454289 FRMPD1Q5SYB0 1578 aa18.45■□□□□ 0.54
TSFM-204ENST00000454289 ABCA6Q8N139 1617 aa18.45■□□□□ 0.54
TSFM-204ENST00000454289 ZNF326Q5BKZ1 582 aaKnown RBP18.45■□□□□ 0.54
TSFM-204ENST00000454289 KANK1Q14678 1352 aa18.44■□□□□ 0.54
TSFM-204ENST00000454289 RAPGEF3O95398 923 aa18.44■□□□□ 0.54
TSFM-204ENST00000454289 RICTORQ6R327 1708 aa18.44■□□□□ 0.54
TSFM-204ENST00000454289 SPATA31E1Q6ZUB1 1445 aa18.43■□□□□ 0.54
TSFM-204ENST00000454289 FAM69CQ0P6D2 419 aa18.42■□□□□ 0.54
TSFM-204ENST00000454289 RNF17Q9BXT8 1623 aaKnown RBP18.42■□□□□ 0.54
TSFM-204ENST00000454289 RALGAPBQ86X10 1494 aa18.42■□□□□ 0.54
TSFM-204ENST00000454289 DCAF11Q8TEB1 546 aa18.42■□□□□ 0.54
TSFM-204ENST00000454289 SPHKAPQ2M3C7 1700 aa18.41■□□□□ 0.54
TSFM-204ENST00000454289 KDM2AQ9Y2K7 1162 aa18.41■□□□□ 0.54
TSFM-204ENST00000454289 TRPM2O94759 1503 aa18.4■□□□□ 0.54
TSFM-204ENST00000454289 PTPRTO14522 1441 aa18.4■□□□□ 0.54
TSFM-204ENST00000454289 WASHC2AQ641Q2 1341 aa18.39■□□□□ 0.54
TSFM-204ENST00000454289 PPRC1Q5VV67 1664 aaKnown RBP18.39■□□□□ 0.53
TSFM-204ENST00000454289 DIP2CQ9Y2E4 1556 aa18.38■□□□□ 0.53
TSFM-204ENST00000454289 BCORL1Q5H9F3 1711 aa18.38■□□□□ 0.53
TSFM-204ENST00000454289 RGL3Q3MIN7 710 aa18.38■□□□□ 0.53
TSFM-204ENST00000454289 TSPOAP1O95153 1857 aa18.38■□□□□ 0.53
TSFM-204ENST00000454289 CEP152O94986 1710 aa18.37■□□□□ 0.53
TSFM-204ENST00000454289 YTHDC1Q96MU7 727 aaKnown RBP18.37■□□□□ 0.53
TSFM-204ENST00000454289 LMTK2Q8IWU2 1503 aa18.36■□□□□ 0.53
TSFM-204ENST00000454289 PRAG1Q86YV5 1406 aa18.36■□□□□ 0.53
TSFM-204ENST00000454289 CLTCL1P53675 1640 aa18.36■□□□□ 0.53
TSFM-204ENST00000454289 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
TSFM-204ENST00000454289 EFCAB6Q5THR3 1501 aa18.36■□□□□ 0.53
TSFM-204ENST00000454289 USP47Q96K76 1375 aa18.36■□□□□ 0.53
TSFM-204ENST00000454289 TRPM1Q7Z4N2 1603 aa18.34■□□□□ 0.53
TSFM-204ENST00000454289 POLR1AO95602 1720 aaPredicted RBP18.34■□□□□ 0.53
TSFM-204ENST00000454289 CCDC7Q96M83 1385 aa18.33■□□□□ 0.53
TSFM-204ENST00000454289 YEATS2Q9ULM3 1422 aa18.33■□□□□ 0.52
TSFM-204ENST00000454289 CARD11Q9BXL7 1154 aa18.31■□□□□ 0.52
TSFM-204ENST00000454289 KIF13AQ9H1H9 1805 aa18.31■□□□□ 0.52
TSFM-204ENST00000454289 ZMYM4Q5VZL5 1548 aa18.31■□□□□ 0.52
TSFM-204ENST00000454289 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
TSFM-204ENST00000454289 GGT6Q6P531 493 aa18.3■□□□□ 0.52
TSFM-204ENST00000454289 ROCK2O75116 1388 aaKnown RBP18.29■□□□□ 0.52
TSFM-204ENST00000454289 KIF7Q2M1P5 1343 aa18.28■□□□□ 0.52
TSFM-204ENST00000454289 ABCC3O15438 1527 aa18.28■□□□□ 0.52
TSFM-204ENST00000454289 UGGT1Q9NYU2 1555 aa18.28■□□□□ 0.52
TSFM-204ENST00000454289 ANP32CO43423 234 aa18.27■□□□□ 0.51
TSFM-204ENST00000454289 CNTLNQ9NXG0 1405 aa18.26■□□□□ 0.51
TSFM-204ENST00000454289 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
TSFM-204ENST00000454289 NPATQ14207 1427 aa18.25■□□□□ 0.51
TSFM-204ENST00000454289 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
TSFM-204ENST00000454289 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
TSFM-204ENST00000454289 LAMC1P11047 1609 aa18.25■□□□□ 0.51
TSFM-204ENST00000454289 CAMSAP1Q5T5Y3 1602 aa18.24■□□□□ 0.51
TSFM-204ENST00000454289 MADDQ8WXG6 1647 aa18.24■□□□□ 0.51
TSFM-204ENST00000454289 CFAP65Q6ZU64 1925 aaKnown RBP18.23■□□□□ 0.51
TSFM-204ENST00000454289 KIF1BO60333 1816 aa18.23■□□□□ 0.51
TSFM-204ENST00000454289 WASHC2CQ9Y4E1 1318 aa18.23■□□□□ 0.51
TSFM-204ENST00000454289 ST20-MTHFSA0A0A6YYL1 179 aa18.21■□□□□ 0.51
TSFM-204ENST00000454289 MROH2AA6NES4 1674 aa18.21■□□□□ 0.5
TSFM-204ENST00000454289 ZC3H13Q5T200 1668 aaKnown RBP18.2■□□□□ 0.5
TSFM-204ENST00000454289 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
TSFM-204ENST00000454289 SIGLEC1Q9BZZ2 1709 aa18.19■□□□□ 0.5
TSFM-204ENST00000454289 COL17A1Q9UMD9 1497 aaPredicted RBP18.18■□□□□ 0.5
TSFM-204ENST00000454289 ARID4BQ4LE39 1312 aaPredicted RBP18.17■□□□□ 0.5
TSFM-204ENST00000454289 STAC3Q96MF2 364 aa18.17■□□□□ 0.5
TSFM-204ENST00000454289 REREQ9P2R6 1566 aa18.17■□□□□ 0.5
TSFM-204ENST00000454289 ADGRB3O60242 1522 aa18.17■□□□□ 0.5
TSFM-204ENST00000454289 IFT172Q9UG01 1749 aa18.17■□□□□ 0.5
TSFM-204ENST00000454289 NOS1P29475 1434 aa18.16■□□□□ 0.5
TSFM-204ENST00000454289 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
TSFM-204ENST00000454289 MYOM2P54296 1465 aa18.15■□□□□ 0.5
TSFM-204ENST00000454289 SYNMO15061 1565 aa18.14■□□□□ 0.49
TSFM-204ENST00000454289 POLR3GLQ9BT43 218 aa18.14■□□□□ 0.49
TSFM-204ENST00000454289 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
TSFM-204ENST00000454289 AGLP35573 1532 aa18.13■□□□□ 0.49
TSFM-204ENST00000454289 PIK3C2BO00750 1634 aa18.12■□□□□ 0.49
TSFM-204ENST00000454289 KIAA1210Q9ULL0 1709 aa18.12■□□□□ 0.49
TSFM-204ENST00000454289 IQGAP1P46940 1657 aa18.12■□□□□ 0.49
TSFM-204ENST00000454289 ARHGEF40Q8TER5 1519 aa18.11■□□□□ 0.49
TSFM-204ENST00000454289 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
TSFM-204ENST00000454289 CHGAP10645 457 aaKnown RBP18.1■□□□□ 0.49
TSFM-204ENST00000454289 ADGRF5Q8IZF2 1346 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms