RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 KIF3BO15066 747 aa29.24■■■□□ 2.27
NCL-205ENST00000453992 ANKRD50Q9ULJ7 1429 aa29.24■■■□□ 2.27
NCL-205ENST00000453992 MROH1Q8NDA8 1641 aa29.23■■■□□ 2.27
NCL-205ENST00000453992 MROH2AA6NES4 1674 aa29.22■■■□□ 2.27
NCL-205ENST00000453992 PRDM15P57071 1507 aaPredicted RBP29.22■■■□□ 2.27
NCL-205ENST00000453992 PPP6R1Q9UPN7 881 aa29.22■■■□□ 2.27
NCL-205ENST00000453992 CNTLNQ9NXG0 1405 aa29.21■■■□□ 2.27
NCL-205ENST00000453992 ZC3H13Q5T200 1668 aaKnown RBP29.21■■■□□ 2.27
NCL-205ENST00000453992 KDM5DQ9BY66 1539 aa29.19■■■□□ 2.26
NCL-205ENST00000453992 HFM1A2PYH4 1435 aa29.19■■■□□ 2.26
NCL-205ENST00000453992 CLTCQ00610 1675 aaKnown RBP29.18■■■□□ 2.26
NCL-205ENST00000453992 PTPRMP28827 1452 aa29.18■■■□□ 2.26
NCL-205ENST00000453992 GGT6Q6P531 493 aa29.18■■■□□ 2.26
NCL-205ENST00000453992 NAIPQ13075 1403 aa29.16■■■□□ 2.26
NCL-205ENST00000453992 UNC13BO14795 1591 aa29.15■■■□□ 2.26
NCL-205ENST00000453992 ESF1Q9H501 851 aaKnown RBP29.14■■■□□ 2.26
NCL-205ENST00000453992 C3P01024 1663 aa29.12■■■□□ 2.25
NCL-205ENST00000453992 ABCC3O15438 1527 aa29.11■■■□□ 2.25
NCL-205ENST00000453992 VWDEQ8N2E2 1590 aa29.11■■■□□ 2.25
NCL-205ENST00000453992 CEP152O94986 1710 aa29.1■■■□□ 2.25
NCL-205ENST00000453992 KANK1Q14678 1352 aa29.07■■■□□ 2.24
NCL-205ENST00000453992 PLPPR3Q6T4P5 718 aa29.07■■■□□ 2.24
NCL-205ENST00000453992 CAMSAP1Q5T5Y3 1602 aa29.05■■■□□ 2.24
NCL-205ENST00000453992 WASHC2CQ9Y4E1 1318 aa29.05■■■□□ 2.24
NCL-205ENST00000453992 LMTK2Q8IWU2 1503 aa29.04■■■□□ 2.24
NCL-205ENST00000453992 IQGAP3Q86VI3 1631 aa29.02■■■□□ 2.24
NCL-205ENST00000453992 ZMYM3Q14202 1370 aa29.01■■■□□ 2.24
NCL-205ENST00000453992 PZPP20742 1482 aa28.98■■■□□ 2.23
NCL-205ENST00000453992 CEBPAP49715 358 aaPredicted RBP28.98■■■□□ 2.23
NCL-205ENST00000453992 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.98■■■□□ 2.234e-30■■■■■ 33.8
NCL-205ENST00000453992 TET3O43151 1660 aa28.98■■■□□ 2.23
NCL-205ENST00000453992 NPATQ14207 1427 aa28.96■■■□□ 2.23
NCL-205ENST00000453992 EFCAB6Q5THR3 1501 aa28.96■■■□□ 2.23
NCL-205ENST00000453992 SETD1BQ9UPS6 1966 aaKnown RBP28.96■■■□□ 2.23
NCL-205ENST00000453992 ARHGAP31Q2M1Z3 1444 aa28.95■■■□□ 2.23
NCL-205ENST00000453992 SETD5Q9C0A6 1442 aa28.94■■■□□ 2.22
NCL-205ENST00000453992 NUP155O75694 1391 aa28.91■■■□□ 2.22
NCL-205ENST00000453992 PREX1Q8TCU6 1659 aa28.91■■■□□ 2.22
NCL-205ENST00000453992 ACIN1Q9UKV3 1341 aaKnown RBP28.91■■■□□ 2.22
NCL-205ENST00000453992 TRIM26Q12899 539 aaPredicted RBP28.88■■■□□ 2.21
NCL-205ENST00000453992 RPRD2Q5VT52 1461 aaKnown RBP28.88■■■□□ 2.21
NCL-205ENST00000453992 SPATA31D1Q6ZQQ2 1576 aa28.88■■■□□ 2.21
NCL-205ENST00000453992 ERVK-7P63135 1459 aa28.85■■■□□ 2.21
NCL-205ENST00000453992 RAB3GAP2Q9H2M9 1393 aa28.85■■■□□ 2.21
NCL-205ENST00000453992 E9PCH4 1651 aa28.84■■■□□ 2.21
NCL-205ENST00000453992 CFAP65Q6ZU64 1925 aaKnown RBP28.84■■■□□ 2.21
NCL-205ENST00000453992 MYO3AQ8NEV4 1616 aa28.83■■■□□ 2.21
NCL-205ENST00000453992 LMTK3Q96Q04 1460 aa28.82■■■□□ 2.2
NCL-205ENST00000453992 ZNF142P52746 1687 aaPredicted RBP28.8■■■□□ 2.2
NCL-205ENST00000453992 UHRF1BP1Q6BDS2 1440 aa28.79■■■□□ 2.2
NCL-205ENST00000453992 TNRQ92752 1358 aa28.79■■■□□ 2.2
NCL-205ENST00000453992 HRCP23327 699 aa28.78■■■□□ 2.2
NCL-205ENST00000453992 HSPA2P54652 639 aa28.78■■■□□ 2.2
NCL-205ENST00000453992 FBXO31Q5XUX0 539 aaPredicted RBP28.78■■■□□ 2.2
NCL-205ENST00000453992 TRIM52Q96A61 297 aa28.77■■■□□ 2.2
NCL-205ENST00000453992 NOS1P29475 1434 aa28.75■■■□□ 2.19
NCL-205ENST00000453992 NLRP1Q9C000 1473 aa28.74■■■□□ 2.19
NCL-205ENST00000453992 CEP170BQ9Y4F5 1589 aaPredicted RBP28.74■■■□□ 2.19
NCL-205ENST00000453992 SYNMO15061 1565 aa28.73■■■□□ 2.19
NCL-205ENST00000453992 SPHKAPQ2M3C7 1700 aa28.72■■■□□ 2.19
NCL-205ENST00000453992 A2ML1A8K2U0 1454 aa28.7■■■□□ 2.18
NCL-205ENST00000453992 SLC4A1APQ9BWU0 796 aaKnown RBP28.68■■■□□ 2.18
NCL-205ENST00000453992 PIK3C2BO00750 1634 aa28.66■■■□□ 2.18
NCL-205ENST00000453992 KDM5AP29375 1690 aaKnown RBP28.65■■■□□ 2.18
NCL-205ENST00000453992 PTPRTO14522 1441 aa28.65■■■□□ 2.18
NCL-205ENST00000453992 MPHOSPH9Q99550 1183 aa28.63■■■□□ 2.17
NCL-205ENST00000453992 TRPM2O94759 1503 aa28.63■■■□□ 2.17
NCL-205ENST00000453992 PKD2Q13563 968 aa28.62■■■□□ 2.17
NCL-205ENST00000453992 UBR1Q8IWV7 1749 aa28.61■■■□□ 2.17
NCL-205ENST00000453992 UGGT1Q9NYU2 1555 aa28.61■■■□□ 2.17
NCL-205ENST00000453992 SLC52A1Q9NWF4 448 aa28.59■■■□□ 2.17
NCL-205ENST00000453992 ADGRB3O60242 1522 aa28.57■■■□□ 2.16
NCL-205ENST00000453992 PLA2R1Q13018 1463 aa28.54■■■□□ 2.16
NCL-205ENST00000453992 CLTCL1P53675 1640 aa28.54■■■□□ 2.16
NCL-205ENST00000453992 IDI1Q13907 227 aa28.52■■■□□ 2.16
NCL-205ENST00000453992 TMEM131LA2VDJ0 1609 aa28.51■■■□□ 2.15
NCL-205ENST00000453992 MYO5BQ9ULV0 1848 aa28.5■■■□□ 2.15
NCL-205ENST00000453992 KIF1BO60333 1816 aa28.49■■■□□ 2.15
NCL-205ENST00000453992 THEMISQ8N1K5 641 aaPredicted RBP28.49■■■□□ 2.15
NCL-205ENST00000453992 POLR1AO95602 1720 aaPredicted RBP28.49■■■□□ 2.15
NCL-205ENST00000453992 STRCQ7RTU9 1775 aa28.47■■■□□ 2.15
NCL-205ENST00000453992 FOXD1Q16676 465 aa28.46■■■□□ 2.15
NCL-205ENST00000453992 SLIT1O75093 1534 aa28.46■■■□□ 2.15
NCL-205ENST00000453992 PCGF6Q9BYE7 350 aa28.44■■■□□ 2.14
NCL-205ENST00000453992 ARHGAP23Q9P227 1491 aa28.44■■■□□ 2.14
NCL-205ENST00000453992 STAG3Q9UJ98 1225 aa28.43■■■□□ 2.14
NCL-205ENST00000453992 CCDC144AA2RUR9 1427 aa28.43■■■□□ 2.14
NCL-205ENST00000453992 TMEM2Q9UHN6 1383 aa28.39■■■□□ 2.14
NCL-205ENST00000453992 ANKRD30BQ9BXX2 1392 aa28.38■■■□□ 2.13
NCL-205ENST00000453992 NEURL4Q96JN8 1562 aa28.38■■■□□ 2.13
NCL-205ENST00000453992 SCAF11Q99590 1463 aaKnown RBP28.34■■■□□ 2.13
NCL-205ENST00000453992 NCKAP5LQ9HCH0 1330 aa28.34■■■□□ 2.13
NCL-205ENST00000453992 DHX57Q6P158 1386 aaKnown RBP28.34■■■□□ 2.13
NCL-205ENST00000453992 ZFYVE9O95405 1425 aa28.34■■■□□ 2.13
NCL-205ENST00000453992 CHGAP10645 457 aaKnown RBP28.33■■■□□ 2.13
NCL-205ENST00000453992 ANKLE2Q86XL3 938 aa28.33■■■□□ 2.13
NCL-205ENST00000453992 MED14O60244 1454 aa28.33■■■□□ 2.13
NCL-205ENST00000453992 DMRT2Q9Y5R5 561 aa28.32■■■□□ 2.12
NCL-205ENST00000453992 RIMS2Q9UQ26 1411 aa28.3■■■□□ 2.12
NCL-205ENST00000453992 ILDR1Q86SU0 546 aaPredicted RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms