RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 WASHC2CQ9Y4E1 1318 aa18.32■□□□□ 0.52
SMPD4-212ENST00000451542 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
SMPD4-212ENST00000451542 NCOA1Q15788 1441 aa18.32■□□□□ 0.52
SMPD4-212ENST00000451542 ZMYM3Q14202 1370 aa18.31■□□□□ 0.52
SMPD4-212ENST00000451542 ADGRL2O95490 1459 aa18.31■□□□□ 0.52
SMPD4-212ENST00000451542 CLTCQ00610 1675 aaKnown RBP18.3■□□□□ 0.52
SMPD4-212ENST00000451542 C3P01024 1663 aa18.29■□□□□ 0.52
SMPD4-212ENST00000451542 ITGAEP38570 1179 aa18.29■□□□□ 0.52
SMPD4-212ENST00000451542 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
SMPD4-212ENST00000451542 KANK1Q14678 1352 aa18.28■□□□□ 0.52
SMPD4-212ENST00000451542 KDM5DQ9BY66 1539 aa18.28■□□□□ 0.52
SMPD4-212ENST00000451542 ROCK1Q13464 1354 aa18.27■□□□□ 0.51
SMPD4-212ENST00000451542 RNF17Q9BXT8 1623 aaKnown RBP18.27■□□□□ 0.51
SMPD4-212ENST00000451542 NPATQ14207 1427 aa18.26■□□□□ 0.51
SMPD4-212ENST00000451542 UHRF1BP1Q6BDS2 1440 aa18.25■□□□□ 0.51
SMPD4-212ENST00000451542 ANKRD50Q9ULJ7 1429 aa18.24■□□□□ 0.51
SMPD4-212ENST00000451542 ZC3H13Q5T200 1668 aaKnown RBP18.24■□□□□ 0.51
SMPD4-212ENST00000451542 PREX1Q8TCU6 1659 aa18.24■□□□□ 0.51
SMPD4-212ENST00000451542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.23■□□□□ 0.512e-6■□□□□ 8.5
SMPD4-212ENST00000451542 PTPRKQ15262 1439 aa18.21■□□□□ 0.51
SMPD4-212ENST00000451542 LMTK3Q96Q04 1460 aa18.2■□□□□ 0.5
SMPD4-212ENST00000451542 ABCC3O15438 1527 aa18.18■□□□□ 0.5
SMPD4-212ENST00000451542 PRDM15P57071 1507 aaPredicted RBP18.18■□□□□ 0.5
SMPD4-212ENST00000451542 PZPP20742 1482 aa18.18■□□□□ 0.5
SMPD4-212ENST00000451542 DEPDC5O75140 1603 aa18.17■□□□□ 0.5
SMPD4-212ENST00000451542 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
SMPD4-212ENST00000451542 HSPA2P54652 639 aa18.15■□□□□ 0.5
SMPD4-212ENST00000451542 TNRQ92752 1358 aa18.15■□□□□ 0.5
SMPD4-212ENST00000451542 CEP152O94986 1710 aa18.15■□□□□ 0.5
SMPD4-212ENST00000451542 CAMSAP1Q5T5Y3 1602 aa18.13■□□□□ 0.49
SMPD4-212ENST00000451542 FBXO31Q5XUX0 539 aaPredicted RBP18.12■□□□□ 0.49
SMPD4-212ENST00000451542 ARHGAP31Q2M1Z3 1444 aa18.12■□□□□ 0.49
SMPD4-212ENST00000451542 LMTK2Q8IWU2 1503 aa18.1■□□□□ 0.49
SMPD4-212ENST00000451542 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
SMPD4-212ENST00000451542 MYO3AQ8NEV4 1616 aa18.09■□□□□ 0.49
SMPD4-212ENST00000451542 NLRP1Q9C000 1473 aa18.08■□□□□ 0.49
SMPD4-212ENST00000451542 CFAP65Q6ZU64 1925 aaKnown RBP18.08■□□□□ 0.49
SMPD4-212ENST00000451542 UNC13BO14795 1591 aa18.08■□□□□ 0.48
SMPD4-212ENST00000451542 VWDEQ8N2E2 1590 aa18.08■□□□□ 0.48
SMPD4-212ENST00000451542 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.48
SMPD4-212ENST00000451542 A2ML1A8K2U0 1454 aa18.07■□□□□ 0.48
SMPD4-212ENST00000451542 SPATA31D1Q6ZQQ2 1576 aa18.07■□□□□ 0.48
SMPD4-212ENST00000451542 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
SMPD4-212ENST00000451542 NUP155O75694 1391 aa18.06■□□□□ 0.48
SMPD4-212ENST00000451542 ZNF142P52746 1687 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-212ENST00000451542 HFM1A2PYH4 1435 aa18.06■□□□□ 0.48
SMPD4-212ENST00000451542 ACIN1Q9UKV3 1341 aaKnown RBP18.05■□□□□ 0.48
SMPD4-212ENST00000451542 THEMISQ8N1K5 641 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-212ENST00000451542 GCC2Q8IWJ2 1684 aa18.05■□□□□ 0.48
SMPD4-212ENST00000451542 NAIPQ13075 1403 aa18.05■□□□□ 0.48
SMPD4-212ENST00000451542 RPRD2Q5VT52 1461 aaKnown RBP18.04■□□□□ 0.48
SMPD4-212ENST00000451542 EFCAB6Q5THR3 1501 aa18.03■□□□□ 0.48
SMPD4-212ENST00000451542 TET3O43151 1660 aa18.03■□□□□ 0.48
SMPD4-212ENST00000451542 PKD2Q13563 968 aa18.02■□□□□ 0.48
SMPD4-212ENST00000451542 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
SMPD4-212ENST00000451542 TRIM52Q96A61 297 aa18.01■□□□□ 0.47
SMPD4-212ENST00000451542 IQGAP3Q86VI3 1631 aa18.01■□□□□ 0.47
SMPD4-212ENST00000451542 PLA2R1Q13018 1463 aa18.01■□□□□ 0.47
SMPD4-212ENST00000451542 UGGT1Q9NYU2 1555 aa18■□□□□ 0.47
SMPD4-212ENST00000451542 SLC52A1Q9NWF4 448 aa18■□□□□ 0.47
SMPD4-212ENST00000451542 ANKLE2Q86XL3 938 aa17.97■□□□□ 0.47
SMPD4-212ENST00000451542 NOS1P29475 1434 aa17.97■□□□□ 0.47
SMPD4-212ENST00000451542 STRCQ7RTU9 1775 aa17.96■□□□□ 0.47
SMPD4-212ENST00000451542 PTPRTO14522 1441 aa17.96■□□□□ 0.47
SMPD4-212ENST00000451542 NCKAP5LQ9HCH0 1330 aa17.94■□□□□ 0.46
SMPD4-212ENST00000451542 IDI1Q13907 227 aa17.93■□□□□ 0.46
SMPD4-212ENST00000451542 SETD5Q9C0A6 1442 aa17.92■□□□□ 0.46
SMPD4-212ENST00000451542 SLC4A1APQ9BWU0 796 aaKnown RBP17.92■□□□□ 0.46
SMPD4-212ENST00000451542 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
SMPD4-212ENST00000451542 E9PCH4 1651 aa17.92■□□□□ 0.46
SMPD4-212ENST00000451542 HDGFP51858 240 aaKnown RBP17.91■□□□□ 0.46
SMPD4-212ENST00000451542 KDM5AP29375 1690 aaKnown RBP17.9■□□□□ 0.46
SMPD4-212ENST00000451542 UBR1Q8IWV7 1749 aa17.9■□□□□ 0.46
SMPD4-212ENST00000451542 SYNMO15061 1565 aa17.9■□□□□ 0.46
SMPD4-212ENST00000451542 POLR1AO95602 1720 aaPredicted RBP17.89■□□□□ 0.46
SMPD4-212ENST00000451542 PIK3C2BO00750 1634 aa17.89■□□□□ 0.45
SMPD4-212ENST00000451542 CHGAP10645 457 aaKnown RBP17.87■□□□□ 0.45
SMPD4-212ENST00000451542 TXNDC2Q86VQ3 553 aa17.87■□□□□ 0.45
SMPD4-212ENST00000451542 ADGRB3O60242 1522 aa17.86■□□□□ 0.45
SMPD4-212ENST00000451542 TMEM2Q9UHN6 1383 aa17.85■□□□□ 0.45
SMPD4-212ENST00000451542 SPHKAPQ2M3C7 1700 aa17.84■□□□□ 0.45
SMPD4-212ENST00000451542 SLIT1O75093 1534 aa17.84■□□□□ 0.45
SMPD4-212ENST00000451542 SCAF11Q99590 1463 aaKnown RBP17.84■□□□□ 0.45
SMPD4-212ENST00000451542 NPHP4O75161 1426 aaPredicted RBP17.84■□□□□ 0.45
SMPD4-212ENST00000451542 MED14O60244 1454 aa17.83■□□□□ 0.45
SMPD4-212ENST00000451542 HRCP23327 699 aa17.83■□□□□ 0.44
SMPD4-212ENST00000451542 ARHGAP23Q9P227 1491 aa17.82■□□□□ 0.44
SMPD4-212ENST00000451542 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
SMPD4-212ENST00000451542 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMPD4-212ENST00000451542 MPHOSPH9Q99550 1183 aa17.82■□□□□ 0.44
SMPD4-212ENST00000451542 PPP1R15AO75807 674 aaPredicted RBP17.8■□□□□ 0.44
SMPD4-212ENST00000451542 NEURL4Q96JN8 1562 aa17.79■□□□□ 0.44
SMPD4-212ENST00000451542 TRPM2O94759 1503 aa17.79■□□□□ 0.44
SMPD4-212ENST00000451542 BCANQ96GW7 911 aa17.79■□□□□ 0.44
SMPD4-212ENST00000451542 IQGAP1P46940 1657 aa17.79■□□□□ 0.44
SMPD4-212ENST00000451542 LTKP29376 864 aa17.78■□□□□ 0.44
SMPD4-212ENST00000451542 CERKQ8TCT0 537 aa17.78■□□□□ 0.44
SMPD4-212ENST00000451542 TMEM131LA2VDJ0 1609 aa17.78■□□□□ 0.44
SMPD4-212ENST00000451542 ZNF326Q5BKZ1 582 aaKnown RBP17.77■□□□□ 0.44
SMPD4-212ENST00000451542 RIMS2Q9UQ26 1411 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms