RNA–Protein interactions for RNA: ENST00000451091.2

PABPC4-207, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-207ENST00000451091 ANKRD50Q9ULJ7 1429 aa35.3■■■■□ 3.24
PABPC4-207ENST00000451091 RIMS1Q86UR5 1692 aaKnown RBP35.3■■■■□ 3.24
PABPC4-207ENST00000451091 PTPRMP28827 1452 aa35.29■■■■□ 3.24
PABPC4-207ENST00000451091 ESF1Q9H501 851 aaKnown RBP35.27■■■■□ 3.24
PABPC4-207ENST00000451091 DEPDC5O75140 1603 aa35.24■■■■□ 3.23
PABPC4-207ENST00000451091 MROH2AA6NES4 1674 aa35.24■■■■□ 3.23
PABPC4-207ENST00000451091 MROH1Q8NDA8 1641 aa35.22■■■■□ 3.23
PABPC4-207ENST00000451091 PRDM15P57071 1507 aaPredicted RBP35.2■■■■□ 3.23
PABPC4-207ENST00000451091 KDM5DQ9BY66 1539 aa35.19■■■■□ 3.22
PABPC4-207ENST00000451091 HFM1A2PYH4 1435 aa35.18■■■■□ 3.22
PABPC4-207ENST00000451091 AEBP2Q6ZN18 517 aaPredicted RBP35.18■■■■□ 3.22
PABPC4-207ENST00000451091 CLTCQ00610 1675 aaKnown RBP35.17■■■■□ 3.22
PABPC4-207ENST00000451091 NAIPQ13075 1403 aa35.17■■■■□ 3.22
PABPC4-207ENST00000451091 ZC3H13Q5T200 1668 aaKnown RBP35.17■■■■□ 3.22
PABPC4-207ENST00000451091 GCC2Q8IWJ2 1684 aa35.17■■■■□ 3.22
PABPC4-207ENST00000451091 WASHC2CQ9Y4E1 1318 aa35.15■■■■□ 3.22
PABPC4-207ENST00000451091 ZMYM3Q14202 1370 aa35.13■■■■□ 3.21
PABPC4-207ENST00000451091 C3P01024 1663 aa35.12■■■■□ 3.21
PABPC4-207ENST00000451091 VWDEQ8N2E2 1590 aa35.11■■■■□ 3.21
PABPC4-207ENST00000451091 KANK1Q14678 1352 aa35.11■■■■□ 3.21
PABPC4-207ENST00000451091 ABCC3O15438 1527 aa35.1■■■■□ 3.21
PABPC4-207ENST00000451091 UNC13BO14795 1591 aa35.09■■■■□ 3.21
PABPC4-207ENST00000451091 LMTK2Q8IWU2 1503 aa35.05■■■■□ 3.2
PABPC4-207ENST00000451091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.04■■■■□ 3.24e-6■□□□□ 8.4
PABPC4-207ENST00000451091 CEP152O94986 1710 aa35.03■■■■□ 3.2
PABPC4-207ENST00000451091 CEBPAP49715 358 aaPredicted RBP35.03■■■■□ 3.2
PABPC4-207ENST00000451091 SETD1BQ9UPS6 1966 aaKnown RBP35.02■■■■□ 3.2
PABPC4-207ENST00000451091 NPATQ14207 1427 aa35.01■■■■□ 3.2
PABPC4-207ENST00000451091 PZPP20742 1482 aa35■■■■□ 3.19
PABPC4-207ENST00000451091 CAMSAP1Q5T5Y3 1602 aa34.99■■■■□ 3.19
PABPC4-207ENST00000451091 ARHGAP31Q2M1Z3 1444 aa34.99■■■■□ 3.19
PABPC4-207ENST00000451091 ACIN1Q9UKV3 1341 aaKnown RBP34.98■■■■□ 3.19
PABPC4-207ENST00000451091 IQGAP3Q86VI3 1631 aa34.95■■■■□ 3.19
PABPC4-207ENST00000451091 SETD5Q9C0A6 1442 aa34.93■■■■□ 3.18
PABPC4-207ENST00000451091 NUP155O75694 1391 aa34.92■■■■□ 3.18
PABPC4-207ENST00000451091 PLPPR3Q6T4P5 718 aa34.91■■■■□ 3.18
PABPC4-207ENST00000451091 TET3O43151 1660 aa34.91■■■■□ 3.18
PABPC4-207ENST00000451091 EFCAB6Q5THR3 1501 aa34.88■■■■□ 3.17
PABPC4-207ENST00000451091 PREX1Q8TCU6 1659 aa34.87■■■■□ 3.17
PABPC4-207ENST00000451091 RPRD2Q5VT52 1461 aaKnown RBP34.86■■■■□ 3.17
PABPC4-207ENST00000451091 TRIM26Q12899 539 aaPredicted RBP34.85■■■■□ 3.17
PABPC4-207ENST00000451091 SPATA31D1Q6ZQQ2 1576 aa34.84■■■■□ 3.17
PABPC4-207ENST00000451091 FBXO31Q5XUX0 539 aaPredicted RBP34.84■■■■□ 3.17
PABPC4-207ENST00000451091 HRCP23327 699 aa34.83■■■■□ 3.17
PABPC4-207ENST00000451091 ERVK-7P63135 1459 aa34.81■■■■□ 3.16
PABPC4-207ENST00000451091 UHRF1BP1Q6BDS2 1440 aa34.8■■■■□ 3.16
PABPC4-207ENST00000451091 TNRQ92752 1358 aa34.79■■■■□ 3.16
PABPC4-207ENST00000451091 RAB3GAP2Q9H2M9 1393 aa34.78■■■■□ 3.16
PABPC4-207ENST00000451091 CFAP65Q6ZU64 1925 aaKnown RBP34.78■■■■□ 3.16
PABPC4-207ENST00000451091 LMTK3Q96Q04 1460 aa34.78■■■■□ 3.16
PABPC4-207ENST00000451091 TRIM52Q96A61 297 aa34.77■■■■□ 3.16
PABPC4-207ENST00000451091 E9PCH4 1651 aa34.76■■■■□ 3.15
PABPC4-207ENST00000451091 MYO3AQ8NEV4 1616 aa34.74■■■■□ 3.15
PABPC4-207ENST00000451091 NOS1P29475 1434 aa34.73■■■■□ 3.15
PABPC4-207ENST00000451091 NLRP1Q9C000 1473 aa34.73■■■■□ 3.15
PABPC4-207ENST00000451091 ZNF142P52746 1687 aaPredicted RBP34.72■■■■□ 3.15
PABPC4-207ENST00000451091 A2ML1A8K2U0 1454 aa34.67■■■■□ 3.14
PABPC4-207ENST00000451091 SLC4A1APQ9BWU0 796 aaKnown RBP34.66■■■■□ 3.14
PABPC4-207ENST00000451091 CEP170BQ9Y4F5 1589 aaPredicted RBP34.66■■■■□ 3.14
PABPC4-207ENST00000451091 SYNMO15061 1565 aa34.63■■■■□ 3.13
PABPC4-207ENST00000451091 SLC52A1Q9NWF4 448 aa34.62■■■■□ 3.13
PABPC4-207ENST00000451091 MPHOSPH9Q99550 1183 aa34.61■■■■□ 3.13
PABPC4-207ENST00000451091 PKD2Q13563 968 aa34.6■■■■□ 3.13
PABPC4-207ENST00000451091 PTPRTO14522 1441 aa34.6■■■■□ 3.13
PABPC4-207ENST00000451091 SPHKAPQ2M3C7 1700 aa34.57■■■■□ 3.12
PABPC4-207ENST00000451091 KDM5AP29375 1690 aaKnown RBP34.57■■■■□ 3.12
PABPC4-207ENST00000451091 UGGT1Q9NYU2 1555 aa34.55■■■■□ 3.12
PABPC4-207ENST00000451091 PIK3C2BO00750 1634 aa34.55■■■■□ 3.12
PABPC4-207ENST00000451091 IDI1Q13907 227 aa34.54■■■■□ 3.12
PABPC4-207ENST00000451091 HSPA2P54652 639 aa34.52■■■■□ 3.12
PABPC4-207ENST00000451091 THEMISQ8N1K5 641 aaPredicted RBP34.52■■■■□ 3.12
PABPC4-207ENST00000451091 UBR1Q8IWV7 1749 aa34.5■■■■□ 3.11
PABPC4-207ENST00000451091 PLA2R1Q13018 1463 aa34.5■■■■□ 3.11
PABPC4-207ENST00000451091 TRPM2O94759 1503 aa34.49■■■■□ 3.11
PABPC4-207ENST00000451091 ADGRB3O60242 1522 aa34.42■■■■□ 3.1
PABPC4-207ENST00000451091 STRCQ7RTU9 1775 aa34.41■■■■□ 3.1
PABPC4-207ENST00000451091 STAG3Q9UJ98 1225 aa34.39■■■■□ 3.1
PABPC4-207ENST00000451091 TMEM131LA2VDJ0 1609 aa34.39■■■■□ 3.1
PABPC4-207ENST00000451091 SLIT1O75093 1534 aa34.38■■■■□ 3.09
PABPC4-207ENST00000451091 FOXD1Q16676 465 aa34.37■■■■□ 3.09
PABPC4-207ENST00000451091 CLTCL1P53675 1640 aa34.37■■■■□ 3.09
PABPC4-207ENST00000451091 ARHGAP23Q9P227 1491 aa34.36■■■■□ 3.09
PABPC4-207ENST00000451091 ANKLE2Q86XL3 938 aa34.33■■■■□ 3.09
PABPC4-207ENST00000451091 DMRT2Q9Y5R5 561 aa34.33■■■■□ 3.09
PABPC4-207ENST00000451091 TMEM2Q9UHN6 1383 aa34.32■■■■□ 3.08
PABPC4-207ENST00000451091 KIF1BO60333 1816 aa34.32■■■■□ 3.08
PABPC4-207ENST00000451091 POLR1AO95602 1720 aaPredicted RBP34.31■■■■□ 3.08
PABPC4-207ENST00000451091 MYO5BQ9ULV0 1848 aa34.31■■■■□ 3.08
PABPC4-207ENST00000451091 CCDC144AA2RUR9 1427 aa34.29■■■■□ 3.08
PABPC4-207ENST00000451091 ANKRD30BQ9BXX2 1392 aa34.28■■■■□ 3.08
PABPC4-207ENST00000451091 PCGF6Q9BYE7 350 aa34.27■■■■□ 3.08
PABPC4-207ENST00000451091 NCKAP5LQ9HCH0 1330 aa34.26■■■■□ 3.07
PABPC4-207ENST00000451091 MED14O60244 1454 aa34.26■■■■□ 3.07
PABPC4-207ENST00000451091 CHGAP10645 457 aaKnown RBP34.25■■■■□ 3.07
PABPC4-207ENST00000451091 HDGFP51858 240 aaKnown RBP34.25■■■■□ 3.07
PABPC4-207ENST00000451091 EID1Q9Y6B2 187 aa34.24■■■■□ 3.07
PABPC4-207ENST00000451091 SCAF11Q99590 1463 aaKnown RBP34.23■■■■□ 3.07
PABPC4-207ENST00000451091 NEURL4Q96JN8 1562 aa34.23■■■■□ 3.07
PABPC4-207ENST00000451091 ZFYVE9O95405 1425 aa34.21■■■■□ 3.07
PABPC4-207ENST00000451091 TXNDC2Q86VQ3 553 aa34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms