RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 BRPF3Q9ULD4 1205 aa27.1■■□□□ 1.93
SMARCD2-203ENST00000448276 PRG4Q92954 1404 aaPredicted RBP27.1■■□□□ 1.93
SMARCD2-203ENST00000448276 PPM1GO15355 546 aaPredicted RBP27.09■■□□□ 1.93
SMARCD2-203ENST00000448276 CAMSAP2Q08AD1 1489 aa27.08■■□□□ 1.93
SMARCD2-203ENST00000448276 RALGAPBQ86X10 1494 aa27.07■■□□□ 1.92
SMARCD2-203ENST00000448276 NUP153P49790 1475 aaKnown RBP27.07■■□□□ 1.92
SMARCD2-203ENST00000448276 WASHC2CQ9Y4E1 1318 aa27.06■■□□□ 1.92
SMARCD2-203ENST00000448276 NLRP13Q86W25 1043 aa27.06■■□□□ 1.92
SMARCD2-203ENST00000448276 C20orf194Q5TEA3 1177 aa27.05■■□□□ 1.92
SMARCD2-203ENST00000448276 CC2D1BQ5T0F9 858 aaKnown RBP27.05■■□□□ 1.92
SMARCD2-203ENST00000448276 NUP155O75694 1391 aa27.05■■□□□ 1.92
SMARCD2-203ENST00000448276 MAGI1Q96QZ7 1491 aaPredicted RBP27.05■■□□□ 1.92
SMARCD2-203ENST00000448276 JPH4Q96JJ6 628 aa27.04■■□□□ 1.92
SMARCD2-203ENST00000448276 UHRF1BP1Q6BDS2 1440 aa27.03■■□□□ 1.92
SMARCD2-203ENST00000448276 SYNJ2O15056 1496 aa27.03■■□□□ 1.92
SMARCD2-203ENST00000448276 PDE3BQ13370 1112 aa27.01■■□□□ 1.91
SMARCD2-203ENST00000448276 CEP170Q5SW79 1584 aa27.01■■□□□ 1.91
SMARCD2-203ENST00000448276 KTN1Q86UP2 1357 aaKnown RBP27■■□□□ 1.91
SMARCD2-203ENST00000448276 NFKBIBQ15653 356 aa27■■□□□ 1.91
SMARCD2-203ENST00000448276 ANKRD50Q9ULJ7 1429 aa26.99■■□□□ 1.91
SMARCD2-203ENST00000448276 PLB1Q6P1J6 1458 aa26.99■■□□□ 1.91
SMARCD2-203ENST00000448276 RAPGEF6Q8TEU7 1601 aa26.99■■□□□ 1.91
SMARCD2-203ENST00000448276 GSE1Q14687 1217 aa26.97■■□□□ 1.91
SMARCD2-203ENST00000448276 PARD3Q8TEW0 1356 aa26.97■■□□□ 1.91
SMARCD2-203ENST00000448276 ANKRD30AQ9BXX3 1397 aa26.97■■□□□ 1.91
SMARCD2-203ENST00000448276 DDRGK1Q96HY6 314 aa26.96■■□□□ 1.91
SMARCD2-203ENST00000448276 GPATCH8Q9UKJ3 1502 aaKnown RBP26.95■■□□□ 1.9
SMARCD2-203ENST00000448276 NBPF1Q3BBV0 1214 aa26.95■■□□□ 1.9
SMARCD2-203ENST00000448276 PER1O15534 1290 aaPredicted RBP26.94■■□□□ 1.9
SMARCD2-203ENST00000448276 FRAT1Q92837 279 aaPredicted RBP26.94■■□□□ 1.9
SMARCD2-203ENST00000448276 RGL3Q3MIN7 710 aa26.92■■□□□ 1.9
SMARCD2-203ENST00000448276 CARMIL2Q6F5E8 1435 aa26.91■■□□□ 1.9
SMARCD2-203ENST00000448276 TROQ12816 1431 aaPredicted RBP26.91■■□□□ 1.9
SMARCD2-203ENST00000448276 ADGBQ8N7X0 1667 aa26.9■■□□□ 1.9
SMARCD2-203ENST00000448276 E9PCH4 1651 aa26.9■■□□□ 1.9
SMARCD2-203ENST00000448276 ADGRL2O95490 1459 aa26.89■■□□□ 1.9
SMARCD2-203ENST00000448276 DAXXQ9UER7 740 aaPredicted RBP26.88■■□□□ 1.89
SMARCD2-203ENST00000448276 PANK3Q9H999 370 aa26.86■■□□□ 1.89
SMARCD2-203ENST00000448276 NUP160Q12769 1436 aa26.86■■□□□ 1.89
SMARCD2-203ENST00000448276 ARHGEF12Q9NZN5 1544 aa26.84■■□□□ 1.89
SMARCD2-203ENST00000448276 KDM2BQ8NHM5 1336 aa26.84■■□□□ 1.89
SMARCD2-203ENST00000448276 ADAMTS8Q9UP79 889 aa26.83■■□□□ 1.89
SMARCD2-203ENST00000448276 RGS3P49796 1198 aa26.82■■□□□ 1.88
SMARCD2-203ENST00000448276 DISP3Q9P2K9 1392 aa26.82■■□□□ 1.88
SMARCD2-203ENST00000448276 FRAT2O75474 233 aaPredicted RBP26.81■■□□□ 1.88
SMARCD2-203ENST00000448276 C8orf34Q49A92 452 aa26.81■■□□□ 1.88
SMARCD2-203ENST00000448276 PLEKHD1A6NEE1 506 aa26.81■■□□□ 1.88
SMARCD2-203ENST00000448276 CROCC2H7BZ55 1655 aa26.8■■□□□ 1.88
SMARCD2-203ENST00000448276 BLMP54132 1417 aaPredicted RBP26.79■■□□□ 1.88
SMARCD2-203ENST00000448276 HNRNPMP52272 730 aaKnown RBP eCLIP26.79■■□□□ 1.88
SMARCD2-203ENST00000448276 C9orf84Q5VXU9 1444 aa26.79■■□□□ 1.88
SMARCD2-203ENST00000448276 FAM161AQ3B820 660 aa26.77■■□□□ 1.88
SMARCD2-203ENST00000448276 ITSN2Q9NZM3 1697 aa26.77■■□□□ 1.88
SMARCD2-203ENST00000448276 TSPY4P0CV99 314 aa26.76■■□□□ 1.87
SMARCD2-203ENST00000448276 TSPY10P0CW01 314 aa26.76■■□□□ 1.87
SMARCD2-203ENST00000448276 CENPQQ7L2Z9 268 aaPredicted RBP26.75■■□□□ 1.87
SMARCD2-203ENST00000448276 TESK2Q96S53 571 aa26.74■■□□□ 1.87
SMARCD2-203ENST00000448276 EIF5BO60841 1220 aaKnown RBP26.74■■□□□ 1.87
SMARCD2-203ENST00000448276 PLEKHH1Q9ULM0 1364 aa26.73■■□□□ 1.87
SMARCD2-203ENST00000448276 PRAG1Q86YV5 1406 aa26.73■■□□□ 1.87
SMARCD2-203ENST00000448276 DUSP27Q5VZP5 1158 aa26.72■■□□□ 1.87
SMARCD2-203ENST00000448276 KDM5DQ9BY66 1539 aa26.71■■□□□ 1.87
SMARCD2-203ENST00000448276 ZMYM4Q5VZL5 1548 aa26.7■■□□□ 1.87
SMARCD2-203ENST00000448276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.69■■□□□ 1.861e-7■■■■□ 21.5
SMARCD2-203ENST00000448276 ATP10BO94823 1461 aa26.68■■□□□ 1.86
SMARCD2-203ENST00000448276 COL17A1Q9UMD9 1497 aaPredicted RBP26.67■■□□□ 1.86
SMARCD2-203ENST00000448276 TRPM1Q7Z4N2 1603 aa26.66■■□□□ 1.86
SMARCD2-203ENST00000448276 CDC42BPAQ5VT25 1732 aa26.65■■□□□ 1.86
SMARCD2-203ENST00000448276 CCDC144AA2RUR9 1427 aa26.65■■□□□ 1.86
SMARCD2-203ENST00000448276 PTPRGP23470 1445 aa26.64■■□□□ 1.85
SMARCD2-203ENST00000448276 WDR43Q15061 677 aaKnown RBP eCLIP26.64■■□□□ 1.85
SMARCD2-203ENST00000448276 ERBINQ96RT1 1412 aa26.63■■□□□ 1.85
SMARCD2-203ENST00000448276 CCDC146Q8IYE0 955 aa26.63■■□□□ 1.85
SMARCD2-203ENST00000448276 ABCA8O94911 1581 aa26.62■■□□□ 1.85
SMARCD2-203ENST00000448276 GOLGA2Q08379 1002 aa26.61■■□□□ 1.85
SMARCD2-203ENST00000448276 PPP2R1AP30153 589 aa26.61■■□□□ 1.85
SMARCD2-203ENST00000448276 TMF1P82094 1093 aa26.61■■□□□ 1.85
SMARCD2-203ENST00000448276 SPINK5Q9NQ38 1064 aaPredicted RBP26.6■■□□□ 1.85
SMARCD2-203ENST00000448276 BCAR3O75815 825 aa26.59■■□□□ 1.85
SMARCD2-203ENST00000448276 ADCY10Q96PN6 1610 aa26.59■■□□□ 1.85
SMARCD2-203ENST00000448276 FAM135AQ9P2D6 1515 aa26.59■■□□□ 1.85
SMARCD2-203ENST00000448276 A2MP01023 1474 aa26.59■■□□□ 1.85
SMARCD2-203ENST00000448276 PLEKHH2Q8IVE3 1493 aa26.58■■□□□ 1.85
SMARCD2-203ENST00000448276 SHANK2Q9UPX8 1470 aa26.57■■□□□ 1.84
SMARCD2-203ENST00000448276 INSRP06213 1382 aa26.57■■□□□ 1.84
SMARCD2-203ENST00000448276 GPRASP1Q5JY77 1395 aa26.56■■□□□ 1.84
SMARCD2-203ENST00000448276 IGHDP01880 384 aa26.56■■□□□ 1.84
SMARCD2-203ENST00000448276 ZNF521Q96K83 1311 aa26.55■■□□□ 1.84
SMARCD2-203ENST00000448276 SEC24BO95487 1268 aa26.55■■□□□ 1.84
SMARCD2-203ENST00000448276 PLA2R1Q13018 1463 aa26.55■■□□□ 1.84
SMARCD2-203ENST00000448276 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.55■■□□□ 1.84
SMARCD2-203ENST00000448276 POGKQ9P215 609 aa26.55■■□□□ 1.84
SMARCD2-203ENST00000448276 KNSTRNQ9Y448 316 aa26.55■■□□□ 1.84
SMARCD2-203ENST00000448276 SLFN5Q08AF3 891 aa26.54■■□□□ 1.84
SMARCD2-203ENST00000448276 ABCC10Q5T3U5 1492 aa26.54■■□□□ 1.84
SMARCD2-203ENST00000448276 MAGI2Q86UL8 1455 aa26.53■■□□□ 1.84
SMARCD2-203ENST00000448276 USP19O94966 1318 aa26.51■■□□□ 1.84
SMARCD2-203ENST00000448276 SLKQ9H2G2 1235 aaPredicted RBP26.51■■□□□ 1.83
SMARCD2-203ENST00000448276 PRDM15P57071 1507 aaPredicted RBP26.51■■□□□ 1.83
SMARCD2-203ENST00000448276 APAF1O14727 1248 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms