RNA–Protein interactions for RNA: ENST00000448011.3

NPIPP1-201, Transcript of nuclear pore complex interacting protein pseudogene 1, humanhuman

TSL 4

Gene NPIPP1, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPP1-201ENST00000448011 KIAA1107Q9UPP5 1409 aa11.49□□□□□ -0.57
NPIPP1-201ENST00000448011 ATP7AQ04656 1500 aa11.49□□□□□ -0.57
NPIPP1-201ENST00000448011 INO80Q9ULG1 1556 aaPredicted RBP11.49□□□□□ -0.57
NPIPP1-201ENST00000448011 ADGBQ8N7X0 1667 aa11.49□□□□□ -0.57
NPIPP1-201ENST00000448011 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
NPIPP1-201ENST00000448011 STRCQ7RTU9 1775 aa11.47□□□□□ -0.57
NPIPP1-201ENST00000448011 CEBPAP49715 358 aaPredicted RBP11.47□□□□□ -0.57
NPIPP1-201ENST00000448011 HNRNPMP52272 730 aaKnown RBP eCLIP11.47□□□□□ -0.57
NPIPP1-201ENST00000448011 SPAG9O60271 1321 aaKnown RBP11.46□□□□□ -0.57
NPIPP1-201ENST00000448011 SPDYE2BA6NHP3 402 aa11.46□□□□□ -0.57
NPIPP1-201ENST00000448011 SPDYE6P0CI01 402 aa11.46□□□□□ -0.57
NPIPP1-201ENST00000448011 SPDYE2Q495Y8 402 aa11.46□□□□□ -0.57
NPIPP1-201ENST00000448011 ESF1Q9H501 851 aaKnown RBP11.46□□□□□ -0.57
NPIPP1-201ENST00000448011 PLXNC1O60486 1568 aa11.45□□□□□ -0.58
NPIPP1-201ENST00000448011 UHRF1BP1Q6BDS2 1440 aa11.44□□□□□ -0.58
NPIPP1-201ENST00000448011 CNTLNQ9NXG0 1405 aa11.44□□□□□ -0.58
NPIPP1-201ENST00000448011 CLTCQ00610 1675 aaKnown RBP11.44□□□□□ -0.58
NPIPP1-201ENST00000448011 FBXO41Q8TF61 875 aa11.44□□□□□ -0.58
NPIPP1-201ENST00000448011 MKRN4PQ13434 485 aaPredicted RBP11.43□□□□□ -0.58
NPIPP1-201ENST00000448011 A2MP01023 1474 aa11.42□□□□□ -0.58
NPIPP1-201ENST00000448011 MBD5Q9P267 1494 aa11.41□□□□□ -0.58
NPIPP1-201ENST00000448011 ZNF644Q9H582 1327 aaPredicted RBP11.4□□□□□ -0.58
NPIPP1-201ENST00000448011 NCOA2Q15596 1464 aa11.4□□□□□ -0.58
NPIPP1-201ENST00000448011 RTEL1-TNFRSF6BF6WH68 1400 aa11.4□□□□□ -0.58
NPIPP1-201ENST00000448011 VPS8Q8N3P4 1428 aa11.39□□□□□ -0.59
NPIPP1-201ENST00000448011 ZNF142P52746 1687 aaPredicted RBP11.39□□□□□ -0.59
NPIPP1-201ENST00000448011 CAMSAP2Q08AD1 1489 aa11.38□□□□□ -0.59
NPIPP1-201ENST00000448011 NPATQ14207 1427 aa11.38□□□□□ -0.59
NPIPP1-201ENST00000448011 LOC105371045A0A1W2PR82 267 aa11.38□□□□□ -0.59
NPIPP1-201ENST00000448011 ZMYM3Q14202 1370 aa11.38□□□□□ -0.59
NPIPP1-201ENST00000448011 ARHGEF5Q12774 1597 aa11.37□□□□□ -0.59
NPIPP1-201ENST00000448011 PITPNM1O00562 1244 aa11.37□□□□□ -0.59
NPIPP1-201ENST00000448011 CCDC141Q6ZP82 1450 aa11.37□□□□□ -0.59
NPIPP1-201ENST00000448011 LRRC9Q6ZRR7 1453 aa11.37□□□□□ -0.59
NPIPP1-201ENST00000448011 MAP3K1Q13233 1512 aa11.36□□□□□ -0.59
NPIPP1-201ENST00000448011 MYO3AQ8NEV4 1616 aa11.36□□□□□ -0.59
NPIPP1-201ENST00000448011 RSPH4AQ5TD94 716 aa11.36□□□□□ -0.59
NPIPP1-201ENST00000448011 GGT6Q6P531 493 aa11.35□□□□□ -0.59
NPIPP1-201ENST00000448011 CERKQ8TCT0 537 aa11.35□□□□□ -0.59
NPIPP1-201ENST00000448011 PTPRTO14522 1441 aa11.35□□□□□ -0.59
NPIPP1-201ENST00000448011 DHX29Q7Z478 1369 aaKnown RBP11.34□□□□□ -0.59
NPIPP1-201ENST00000448011 CAMSAP1Q5T5Y3 1602 aa11.34□□□□□ -0.59
NPIPP1-201ENST00000448011 CFAP65Q6ZU64 1925 aaKnown RBP11.33□□□□□ -0.6
NPIPP1-201ENST00000448011 FAM135AQ9P2D6 1515 aa11.33□□□□□ -0.6
NPIPP1-201ENST00000448011 PTPRKQ15262 1439 aa11.33□□□□□ -0.6
NPIPP1-201ENST00000448011 NCOA1Q15788 1441 aa11.33□□□□□ -0.6
NPIPP1-201ENST00000448011 FKBP8Q14318 412 aa11.32□□□□□ -0.6
NPIPP1-201ENST00000448011 MAST1Q9Y2H9 1570 aa11.32□□□□□ -0.6
NPIPP1-201ENST00000448011 CEP170BQ9Y4F5 1589 aaPredicted RBP11.32□□□□□ -0.6
NPIPP1-201ENST00000448011 PIP4P2Q8N4L2 257 aa11.31□□□□□ -0.6
NPIPP1-201ENST00000448011 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
NPIPP1-201ENST00000448011 KDM5DQ9BY66 1539 aa11.3□□□□□ -0.6
NPIPP1-201ENST00000448011 POLR1AO95602 1720 aaPredicted RBP11.3□□□□□ -0.6
NPIPP1-201ENST00000448011 KIF3BO15066 747 aa11.3□□□□□ -0.6
NPIPP1-201ENST00000448011 TSPY4P0CV99 314 aa11.3□□□□□ -0.6
NPIPP1-201ENST00000448011 TSPY10P0CW01 314 aa11.3□□□□□ -0.6
NPIPP1-201ENST00000448011 MYOM3Q5VTT5 1437 aa11.29□□□□□ -0.6
NPIPP1-201ENST00000448011 MIA2Q96PC5 1412 aa11.29□□□□□ -0.6
NPIPP1-201ENST00000448011 RNF17Q9BXT8 1623 aaKnown RBP11.29□□□□□ -0.6
NPIPP1-201ENST00000448011 EIF2AK4Q9P2K8 1649 aaKnown RBP11.29□□□□□ -0.6
NPIPP1-201ENST00000448011 KANK4Q5T7N3 995 aaPredicted RBP11.29□□□□□ -0.6
NPIPP1-201ENST00000448011 PLA2R1Q13018 1463 aa11.29□□□□□ -0.6
NPIPP1-201ENST00000448011 CROCC2H7BZ55 1655 aa11.29□□□□□ -0.6
NPIPP1-201ENST00000448011 ZC3H13Q5T200 1668 aaKnown RBP11.29□□□□□ -0.6
NPIPP1-201ENST00000448011 DNMT1P26358 1616 aaKnown RBP11.28□□□□□ -0.6
NPIPP1-201ENST00000448011 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.6
NPIPP1-201ENST00000448011 LTBP4Q8N2S1 1624 aa11.27□□□□□ -0.6
NPIPP1-201ENST00000448011 A2ML1A8K2U0 1454 aa11.27□□□□□ -0.6
NPIPP1-201ENST00000448011 PZPP20742 1482 aa11.27□□□□□ -0.6
NPIPP1-201ENST00000448011 ZNF692Q9BU19 519 aaPredicted RBP11.27□□□□□ -0.61
NPIPP1-201ENST00000448011 CEP152O94986 1710 aa11.26□□□□□ -0.61
NPIPP1-201ENST00000448011 PTPN23Q9H3S7 1636 aa11.26□□□□□ -0.61
NPIPP1-201ENST00000448011 TCOF1Q13428 1488 aaKnown RBP11.25□□□□□ -0.61
NPIPP1-201ENST00000448011 PKD2Q13563 968 aa11.25□□□□□ -0.61
NPIPP1-201ENST00000448011 NCKAP5LQ9HCH0 1330 aa11.25□□□□□ -0.61
NPIPP1-201ENST00000448011 WASHC2CQ9Y4E1 1318 aa11.25□□□□□ -0.61
NPIPP1-201ENST00000448011 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
NPIPP1-201ENST00000448011 TNRQ92752 1358 aa11.24□□□□□ -0.61
NPIPP1-201ENST00000448011 SPDYE1Q8NFV5 336 aaPredicted RBP11.23□□□□□ -0.61
NPIPP1-201ENST00000448011 DUOX2Q9NRD8 1548 aa11.23□□□□□ -0.61
NPIPP1-201ENST00000448011 MROH1Q8NDA8 1641 aa11.23□□□□□ -0.61
NPIPP1-201ENST00000448011 ABCC3O15438 1527 aa11.22□□□□□ -0.61
NPIPP1-201ENST00000448011 FBXO31Q5XUX0 539 aaPredicted RBP11.22□□□□□ -0.61
NPIPP1-201ENST00000448011 SHANK2Q9UPX8 1470 aa11.22□□□□□ -0.61
NPIPP1-201ENST00000448011 NLRP1Q9C000 1473 aa11.21□□□□□ -0.61
NPIPP1-201ENST00000448011 SPATA31D1Q6ZQQ2 1576 aa11.2□□□□□ -0.62
NPIPP1-201ENST00000448011 NEURL4Q96JN8 1562 aa11.2□□□□□ -0.62
NPIPP1-201ENST00000448011 DEPDC5O75140 1603 aa11.2□□□□□ -0.62
NPIPP1-201ENST00000448011 UGGT1Q9NYU2 1555 aa11.2□□□□□ -0.62
NPIPP1-201ENST00000448011 ABCC5O15440 1437 aa11.18□□□□□ -0.62
NPIPP1-201ENST00000448011 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
NPIPP1-201ENST00000448011 ZNF335Q9H4Z2 1342 aaPredicted RBP11.18□□□□□ -0.62
NPIPP1-201ENST00000448011 PRDM15P57071 1507 aaPredicted RBP11.18□□□□□ -0.62
NPIPP1-201ENST00000448011 UBR1Q8IWV7 1749 aa11.18□□□□□ -0.62
NPIPP1-201ENST00000448011 DAPK1P53355 1430 aa11.18□□□□□ -0.62
NPIPP1-201ENST00000448011 ERBINQ96RT1 1412 aa11.18□□□□□ -0.62
NPIPP1-201ENST00000448011 KIF15Q9NS87 1388 aa11.17□□□□□ -0.62
NPIPP1-201ENST00000448011 THEMISQ8N1K5 641 aaPredicted RBP11.17□□□□□ -0.62
NPIPP1-201ENST00000448011 ERVK-7P63135 1459 aa11.17□□□□□ -0.62
NPIPP1-201ENST00000448011 IQGAP1P46940 1657 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 354 ms