RNA–Protein interactions for RNA: ENST00000448011.3

NPIPP1-201, Transcript of nuclear pore complex interacting protein pseudogene 1, humanhuman

TSL 4

Gene NPIPP1, Length 575 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPP1-201ENST00000448011 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
NPIPP1-201ENST00000448011 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
NPIPP1-201ENST00000448011 NISCHQ9Y2I1 1504 aa17.88■□□□□ 0.45
NPIPP1-201ENST00000448011 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
NPIPP1-201ENST00000448011 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
NPIPP1-201ENST00000448011 FOXD1Q16676 465 aa16.6■□□□□ 0.25
NPIPP1-201ENST00000448011 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
NPIPP1-201ENST00000448011 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
NPIPP1-201ENST00000448011 ABCC9O60706 1549 aa15.94■□□□□ 0.14
NPIPP1-201ENST00000448011 MSH5O43196 834 aa15.57■□□□□ 0.08
NPIPP1-201ENST00000448011 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
NPIPP1-201ENST00000448011 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
NPIPP1-201ENST00000448011 ADRA2BP18089 450 aa15.49■□□□□ 0.07
NPIPP1-201ENST00000448011 RB1CC1Q8TDY2 1594 aa15.25■□□□□ 0.03
NPIPP1-201ENST00000448011 NACADO15069 1562 aa15.16■□□□□ 0.02
NPIPP1-201ENST00000448011 POTEDQ86YR6 584 aa15.03■□□□□ -0
NPIPP1-201ENST00000448011 UNC13AQ9UPW8 1703 aa15.01□□□□□ -0.01
NPIPP1-201ENST00000448011 DCAF8L2P0C7V8 631 aa15□□□□□ -0.01
NPIPP1-201ENST00000448011 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
NPIPP1-201ENST00000448011 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
NPIPP1-201ENST00000448011 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
NPIPP1-201ENST00000448011 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
NPIPP1-201ENST00000448011 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
NPIPP1-201ENST00000448011 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
NPIPP1-201ENST00000448011 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
NPIPP1-201ENST00000448011 SHROOM4Q9ULL8 1493 aa14.61□□□□□ -0.07
NPIPP1-201ENST00000448011 CC2D2AQ9P2K1 1620 aa14.44□□□□□ -0.1
NPIPP1-201ENST00000448011 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
NPIPP1-201ENST00000448011 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
NPIPP1-201ENST00000448011 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
NPIPP1-201ENST00000448011 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
NPIPP1-201ENST00000448011 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
NPIPP1-201ENST00000448011 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
NPIPP1-201ENST00000448011 SMARCA4P51532 1647 aa13.97□□□□□ -0.17
NPIPP1-201ENST00000448011 NCAPD3P42695 1498 aa13.95□□□□□ -0.18
NPIPP1-201ENST00000448011 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
NPIPP1-201ENST00000448011 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
NPIPP1-201ENST00000448011 HMGXB3Q12766 1538 aa13.9□□□□□ -0.19
NPIPP1-201ENST00000448011 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
NPIPP1-201ENST00000448011 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.2
NPIPP1-201ENST00000448011 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
NPIPP1-201ENST00000448011 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
NPIPP1-201ENST00000448011 ERCC6Q03468 1493 aa13.76□□□□□ -0.21
NPIPP1-201ENST00000448011 CUX2O14529 1486 aa13.74□□□□□ -0.21
NPIPP1-201ENST00000448011 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
NPIPP1-201ENST00000448011 NESP48681 1621 aa13.71□□□□□ -0.22
NPIPP1-201ENST00000448011 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
NPIPP1-201ENST00000448011 LAMC3Q9Y6N6 1575 aa13.68□□□□□ -0.22
NPIPP1-201ENST00000448011 WIZO95785 1651 aa13.65□□□□□ -0.22
NPIPP1-201ENST00000448011 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
NPIPP1-201ENST00000448011 DNAJC5Q9H3Z4 198 aa13.62□□□□□ -0.23
NPIPP1-201ENST00000448011 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
NPIPP1-201ENST00000448011 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
NPIPP1-201ENST00000448011 PDS5BQ9NTI5 1447 aa13.55□□□□□ -0.24
NPIPP1-201ENST00000448011 CADPSQ9ULU8 1353 aa13.52□□□□□ -0.25
NPIPP1-201ENST00000448011 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
NPIPP1-201ENST00000448011 NCBP3Q53F19 620 aaKnown RBP13.5□□□□□ -0.25
NPIPP1-201ENST00000448011 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
NPIPP1-201ENST00000448011 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.25
NPIPP1-201ENST00000448011 MRC2Q9UBG0 1479 aa13.44□□□□□ -0.26
NPIPP1-201ENST00000448011 PRDM2Q13029 1718 aa13.43□□□□□ -0.26
NPIPP1-201ENST00000448011 WDR62O43379 1518 aa13.42□□□□□ -0.26
NPIPP1-201ENST00000448011 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
NPIPP1-201ENST00000448011 CFTRP13569 1480 aa13.39□□□□□ -0.27
NPIPP1-201ENST00000448011 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
NPIPP1-201ENST00000448011 CCDC88BA6NC98 1476 aa13.28□□□□□ -0.28
NPIPP1-201ENST00000448011 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
NPIPP1-201ENST00000448011 RNF39Q9H2S5 420 aa13.27□□□□□ -0.29
NPIPP1-201ENST00000448011 URB2Q14146 1524 aaKnown RBP13.27□□□□□ -0.29
NPIPP1-201ENST00000448011 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
NPIPP1-201ENST00000448011 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
NPIPP1-201ENST00000448011 ABCC8Q09428 1581 aa13.15□□□□□ -0.3
NPIPP1-201ENST00000448011 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
NPIPP1-201ENST00000448011 IFT140Q96RY7 1462 aa13.13□□□□□ -0.31
NPIPP1-201ENST00000448011 DNMBPQ6XZF7 1577 aa13.12□□□□□ -0.31
NPIPP1-201ENST00000448011 C1QBPQ07021 282 aaKnown RBP13.1□□□□□ -0.31
NPIPP1-201ENST00000448011 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
NPIPP1-201ENST00000448011 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
NPIPP1-201ENST00000448011 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
NPIPP1-201ENST00000448011 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
NPIPP1-201ENST00000448011 KCNA4P22459 653 aa13.05□□□□□ -0.32
NPIPP1-201ENST00000448011 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
NPIPP1-201ENST00000448011 CHD1O14646 1710 aa13.02□□□□□ -0.33
NPIPP1-201ENST00000448011 POLA1P09884 1462 aaPredicted RBP13□□□□□ -0.33
NPIPP1-201ENST00000448011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.334e-9■■■■■ 29.2
NPIPP1-201ENST00000448011 RIMBP3CA6NJZ7 1639 aa12.97□□□□□ -0.33
NPIPP1-201ENST00000448011 RIMBP3BA6NNM3 1639 aa12.97□□□□□ -0.33
NPIPP1-201ENST00000448011 RIMBP3Q9UFD9 1639 aa12.97□□□□□ -0.33
NPIPP1-201ENST00000448011 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.34
NPIPP1-201ENST00000448011 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
NPIPP1-201ENST00000448011 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
NPIPP1-201ENST00000448011 SOGA1O94964 1423 aa12.94□□□□□ -0.34
NPIPP1-201ENST00000448011 CUX1P39880 1505 aa12.93□□□□□ -0.34
NPIPP1-201ENST00000448011 FGD5Q6ZNL6 1462 aa12.93□□□□□ -0.34
NPIPP1-201ENST00000448011 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
NPIPP1-201ENST00000448011 ARHGEF11O15085 1522 aa12.9□□□□□ -0.34
NPIPP1-201ENST00000448011 TDRD9Q8NDG6 1382 aaKnown RBP12.88□□□□□ -0.35
NPIPP1-201ENST00000448011 PBRM1Q86U86 1689 aa12.88□□□□□ -0.35
NPIPP1-201ENST00000448011 FBLN2P98095 1184 aa12.85□□□□□ -0.35
NPIPP1-201ENST00000448011 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms