RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 PPP6R1Q9UPN7 881 aa25.74■■□□□ 1.71
SGCE-206ENST00000445866 ESF1Q9H501 851 aaKnown RBP25.73■■□□□ 1.71
SGCE-206ENST00000445866 KANK1Q14678 1352 aa25.73■■□□□ 1.71
SGCE-206ENST00000445866 SLC4A1APQ9BWU0 796 aaKnown RBP25.72■■□□□ 1.71
SGCE-206ENST00000445866 AGLP35573 1532 aa25.71■■□□□ 1.71
SGCE-206ENST00000445866 REREQ9P2R6 1566 aa25.71■■□□□ 1.71
SGCE-206ENST00000445866 MPHOSPH9Q99550 1183 aa25.71■■□□□ 1.71
SGCE-206ENST00000445866 GCC2Q8IWJ2 1684 aa25.65■■□□□ 1.7
SGCE-206ENST00000445866 PKD2Q13563 968 aa25.64■■□□□ 1.69
SGCE-206ENST00000445866 EIF2AK4Q9P2K8 1649 aaKnown RBP25.6■■□□□ 1.69
SGCE-206ENST00000445866 FOXD1Q16676 465 aa25.58■■□□□ 1.69
SGCE-206ENST00000445866 CCER1Q8TC90 406 aaPredicted RBP25.56■■□□□ 1.68
SGCE-206ENST00000445866 SIGLEC1Q9BZZ2 1709 aa25.55■■□□□ 1.68
SGCE-206ENST00000445866 PZPP20742 1482 aa25.55■■□□□ 1.68
SGCE-206ENST00000445866 DHX57Q6P158 1386 aaKnown RBP25.54■■□□□ 1.68
SGCE-206ENST00000445866 ZMYM3Q14202 1370 aa25.52■■□□□ 1.68
SGCE-206ENST00000445866 FAM135AQ9P2D6 1515 aa25.52■■□□□ 1.68
SGCE-206ENST00000445866 PLPPR3Q6T4P5 718 aa25.52■■□□□ 1.68
SGCE-206ENST00000445866 RNF17Q9BXT8 1623 aaKnown RBP25.51■■□□□ 1.67
SGCE-206ENST00000445866 PRDM15P57071 1507 aaPredicted RBP25.51■■□□□ 1.67
SGCE-206ENST00000445866 MROH1Q8NDA8 1641 aa25.51■■□□□ 1.67
SGCE-206ENST00000445866 UNC13BO14795 1591 aa25.5■■□□□ 1.67
SGCE-206ENST00000445866 CEBPAP49715 358 aaPredicted RBP25.5■■□□□ 1.67
SGCE-206ENST00000445866 CNTLNQ9NXG0 1405 aa25.5■■□□□ 1.67
SGCE-206ENST00000445866 BCORL1Q5H9F3 1711 aa25.5■■□□□ 1.67
SGCE-206ENST00000445866 ABCC3O15438 1527 aa25.49■■□□□ 1.67
SGCE-206ENST00000445866 KDM5DQ9BY66 1539 aa25.49■■□□□ 1.67
SGCE-206ENST00000445866 FBXO31Q5XUX0 539 aaPredicted RBP25.48■■□□□ 1.67
SGCE-206ENST00000445866 VWDEQ8N2E2 1590 aa25.48■■□□□ 1.67
SGCE-206ENST00000445866 DEPDC5O75140 1603 aa25.48■■□□□ 1.67
SGCE-206ENST00000445866 LMTK2Q8IWU2 1503 aa25.46■■□□□ 1.67
SGCE-206ENST00000445866 KDM4FA0A1W2PPD8 638 aa25.46■■□□□ 1.67
SGCE-206ENST00000445866 NPATQ14207 1427 aa25.42■■□□□ 1.66
SGCE-206ENST00000445866 ARHGAP31Q2M1Z3 1444 aa25.42■■□□□ 1.66
SGCE-206ENST00000445866 IQGAP3Q86VI3 1631 aa25.42■■□□□ 1.66
SGCE-206ENST00000445866 ANKRD30BQ9BXX2 1392 aa25.39■■□□□ 1.65
SGCE-206ENST00000445866 NEUROD1Q13562 356 aa25.36■■□□□ 1.65
SGCE-206ENST00000445866 SIN3AQ96ST3 1273 aa25.36■■□□□ 1.65
SGCE-206ENST00000445866 RPRD2Q5VT52 1461 aaKnown RBP25.35■■□□□ 1.65
SGCE-206ENST00000445866 EFCAB6Q5THR3 1501 aa25.34■■□□□ 1.65
SGCE-206ENST00000445866 CLSPNQ9HAW4 1339 aa25.34■■□□□ 1.65
SGCE-206ENST00000445866 PLA2R1Q13018 1463 aa25.33■■□□□ 1.64
SGCE-206ENST00000445866 SLC52A1Q9NWF4 448 aa25.32■■□□□ 1.64
SGCE-206ENST00000445866 PTPRTO14522 1441 aa25.32■■□□□ 1.64
SGCE-206ENST00000445866 IDI1Q13907 227 aa25.32■■□□□ 1.64
SGCE-206ENST00000445866 TET3O43151 1660 aa25.31■■□□□ 1.64
SGCE-206ENST00000445866 ADAMTSL3P82987 1691 aa25.31■■□□□ 1.64
SGCE-206ENST00000445866 CLTCQ00610 1675 aaKnown RBP25.31■■□□□ 1.64
SGCE-206ENST00000445866 MADDQ8WXG6 1647 aa25.3■■□□□ 1.64
SGCE-206ENST00000445866 NOS1P29475 1434 aa25.29■■□□□ 1.64
SGCE-206ENST00000445866 PTPRMP28827 1452 aa25.29■■□□□ 1.64
SGCE-206ENST00000445866 TNRQ92752 1358 aa25.29■■□□□ 1.64
SGCE-206ENST00000445866 ZC3H13Q5T200 1668 aaKnown RBP25.29■■□□□ 1.64
SGCE-206ENST00000445866 CEP152O94986 1710 aa25.28■■□□□ 1.64
SGCE-206ENST00000445866 CHGAP10645 457 aaKnown RBP25.28■■□□□ 1.64
SGCE-206ENST00000445866 ERVK-7P63135 1459 aa25.27■■□□□ 1.64
SGCE-206ENST00000445866 CCDC144AA2RUR9 1427 aa25.27■■□□□ 1.64
SGCE-206ENST00000445866 CAMSAP1Q5T5Y3 1602 aa25.26■■□□□ 1.63
SGCE-206ENST00000445866 STAG3Q9UJ98 1225 aa25.25■■□□□ 1.63
SGCE-206ENST00000445866 E9PCH4 1651 aa25.23■■□□□ 1.63
SGCE-206ENST00000445866 RGL3Q3MIN7 710 aa25.23■■□□□ 1.63
SGCE-206ENST00000445866 FER1L4A9Z1Z3 1794 aa25.22■■□□□ 1.63
SGCE-206ENST00000445866 RIMS1Q86UR5 1692 aaKnown RBP25.2■■□□□ 1.63
SGCE-206ENST00000445866 MROH2AA6NES4 1674 aa25.18■■□□□ 1.62
SGCE-206ENST00000445866 ZNF326Q5BKZ1 582 aaKnown RBP25.17■■□□□ 1.62
SGCE-206ENST00000445866 SPATA31D1Q6ZQQ2 1576 aa25.17■■□□□ 1.62
SGCE-206ENST00000445866 TRPM2O94759 1503 aa25.16■■□□□ 1.62
SGCE-206ENST00000445866 UGGT1Q9NYU2 1555 aa25.14■■□□□ 1.61
SGCE-206ENST00000445866 THEMISQ8N1K5 641 aaPredicted RBP25.13■■□□□ 1.61
SGCE-206ENST00000445866 C3P01024 1663 aa25.12■■□□□ 1.61
SGCE-206ENST00000445866 L3MBTL2Q969R5 705 aa25.12■■□□□ 1.61
SGCE-206ENST00000445866 SYNMO15061 1565 aa25.12■■□□□ 1.61
SGCE-206ENST00000445866 TIMELESSQ9UNS1 1208 aa25.1■■□□□ 1.61
SGCE-206ENST00000445866 NLRP1Q9C000 1473 aa25.1■■□□□ 1.61
SGCE-206ENST00000445866 PREX1Q8TCU6 1659 aa25.09■■□□□ 1.61
SGCE-206ENST00000445866 TONSLQ96HA7 1378 aa25.09■■□□□ 1.61
SGCE-206ENST00000445866 DCAF11Q8TEB1 546 aa25.09■■□□□ 1.61
SGCE-206ENST00000445866 KDM2AQ9Y2K7 1162 aa25.09■■□□□ 1.61
SGCE-206ENST00000445866 CFAP65Q6ZU64 1925 aaKnown RBP25.07■■□□□ 1.6
SGCE-206ENST00000445866 UHRF1BP1Q6BDS2 1440 aa25.06■■□□□ 1.6
SGCE-206ENST00000445866 SPATA31E1Q6ZUB1 1445 aa25.06■■□□□ 1.6
SGCE-206ENST00000445866 HDGFP51858 240 aaKnown RBP25.05■■□□□ 1.6
SGCE-206ENST00000445866 RPGRIP1LQ68CZ1 1315 aa25.05■■□□□ 1.6
SGCE-206ENST00000445866 SPHKAPQ2M3C7 1700 aa25.05■■□□□ 1.6
SGCE-206ENST00000445866 NUTM2DQ5VT03 806 aaPredicted RBP25.04■■□□□ 1.6
SGCE-206ENST00000445866 CLTCL1P53675 1640 aa25.04■■□□□ 1.6
SGCE-206ENST00000445866 A2ML1A8K2U0 1454 aa25.02■■□□□ 1.6
SGCE-206ENST00000445866 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
SGCE-206ENST00000445866 VGFO15240 615 aaPredicted RBP25.01■■□□□ 1.59
SGCE-206ENST00000445866 ZEB1P37275 1124 aaPredicted RBP25.01■■□□□ 1.59
SGCE-206ENST00000445866 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.01■■□□□ 1.59
SGCE-206ENST00000445866 TXNDC2Q86VQ3 553 aa25■■□□□ 1.59
SGCE-206ENST00000445866 STAC3Q96MF2 364 aa25■■□□□ 1.59
SGCE-206ENST00000445866 EID1Q9Y6B2 187 aa25■■□□□ 1.59
SGCE-206ENST00000445866 PPP1R15AO75807 674 aaPredicted RBP24.98■■□□□ 1.59
SGCE-206ENST00000445866 TMEM2Q9UHN6 1383 aa24.98■■□□□ 1.59
SGCE-206ENST00000445866 PIK3C2BO00750 1634 aa24.98■■□□□ 1.59
SGCE-206ENST00000445866 HSPA2P54652 639 aa24.97■■□□□ 1.59
SGCE-206ENST00000445866 LTKP29376 864 aa24.96■■□□□ 1.59
SGCE-206ENST00000445866 ANKLE2Q86XL3 938 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms