RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 FAM135AQ9P2D6 1515 aa18.62■□□□□ 0.57
LTBR-204ENST00000444814 SIGLEC1Q9BZZ2 1709 aa18.61■□□□□ 0.57
LTBR-204ENST00000444814 ERBINQ96RT1 1412 aa18.61■□□□□ 0.57
LTBR-204ENST00000444814 RRP7BPQ9NSQ0 103 aa18.6■□□□□ 0.57
LTBR-204ENST00000444814 CHIC2Q9UKJ5 165 aa18.6■□□□□ 0.57
LTBR-204ENST00000444814 RRBP1Q9P2E9 1410 aaKnown RBP18.59■□□□□ 0.57
LTBR-204ENST00000444814 ADGRL2O95490 1459 aa18.59■□□□□ 0.57
LTBR-204ENST00000444814 EIF2AK4Q9P2K8 1649 aaKnown RBP18.58■□□□□ 0.57
LTBR-204ENST00000444814 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
LTBR-204ENST00000444814 ROCK1Q13464 1354 aa18.56■□□□□ 0.56
LTBR-204ENST00000444814 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
LTBR-204ENST00000444814 KANK1Q14678 1352 aa18.56■□□□□ 0.56
LTBR-204ENST00000444814 ITGAEP38570 1179 aa18.54■□□□□ 0.56
LTBR-204ENST00000444814 MROH2AA6NES4 1674 aa18.53■□□□□ 0.56
LTBR-204ENST00000444814 ZMYM3Q14202 1370 aa18.53■□□□□ 0.56
LTBR-204ENST00000444814 KDM5DQ9BY66 1539 aa18.52■□□□□ 0.56
LTBR-204ENST00000444814 NPATQ14207 1427 aa18.51■□□□□ 0.55
LTBR-204ENST00000444814 ANKRD50Q9ULJ7 1429 aa18.51■□□□□ 0.55
LTBR-204ENST00000444814 RNF17Q9BXT8 1623 aaKnown RBP18.5■□□□□ 0.55
LTBR-204ENST00000444814 CEBPAP49715 358 aaPredicted RBP18.48■□□□□ 0.55
LTBR-204ENST00000444814 ZC3H13Q5T200 1668 aaKnown RBP18.47■□□□□ 0.55
LTBR-204ENST00000444814 UHRF1BP1Q6BDS2 1440 aa18.47■□□□□ 0.55
LTBR-204ENST00000444814 CLTCQ00610 1675 aaKnown RBP18.47■□□□□ 0.55
LTBR-204ENST00000444814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.55
LTBR-204ENST00000444814 C3P01024 1663 aa18.45■□□□□ 0.54
LTBR-204ENST00000444814 PTPRKQ15262 1439 aa18.44■□□□□ 0.54
LTBR-204ENST00000444814 PRDM15P57071 1507 aaPredicted RBP18.44■□□□□ 0.54
LTBR-204ENST00000444814 PZPP20742 1482 aa18.42■□□□□ 0.54
LTBR-204ENST00000444814 ACIN1Q9UKV3 1341 aaKnown RBP18.42■□□□□ 0.54
LTBR-204ENST00000444814 SETD1BQ9UPS6 1966 aaKnown RBP18.42■□□□□ 0.54
LTBR-204ENST00000444814 ABCC3O15438 1527 aa18.42■□□□□ 0.54
LTBR-204ENST00000444814 PREX1Q8TCU6 1659 aa18.41■□□□□ 0.54
LTBR-204ENST00000444814 DEPDC5O75140 1603 aa18.4■□□□□ 0.54
LTBR-204ENST00000444814 LMTK3Q96Q04 1460 aa18.38■□□□□ 0.53
LTBR-204ENST00000444814 TNRQ92752 1358 aa18.38■□□□□ 0.53
LTBR-204ENST00000444814 ARHGAP31Q2M1Z3 1444 aa18.38■□□□□ 0.53
LTBR-204ENST00000444814 MROH1Q8NDA8 1641 aa18.37■□□□□ 0.53
LTBR-204ENST00000444814 LMTK2Q8IWU2 1503 aa18.36■□□□□ 0.53
LTBR-204ENST00000444814 HFM1A2PYH4 1435 aa18.35■□□□□ 0.53
LTBR-204ENST00000444814 CAMSAP1Q5T5Y3 1602 aa18.34■□□□□ 0.53
LTBR-204ENST00000444814 NLRP1Q9C000 1473 aa18.33■□□□□ 0.53
LTBR-204ENST00000444814 DMRT2Q9Y5R5 561 aa18.33■□□□□ 0.52
LTBR-204ENST00000444814 NUP155O75694 1391 aa18.32■□□□□ 0.52
LTBR-204ENST00000444814 UNC13BO14795 1591 aa18.32■□□□□ 0.52
LTBR-204ENST00000444814 VWDEQ8N2E2 1590 aa18.32■□□□□ 0.52
LTBR-204ENST00000444814 RPRD2Q5VT52 1461 aaKnown RBP18.32■□□□□ 0.52
LTBR-204ENST00000444814 NAIPQ13075 1403 aa18.32■□□□□ 0.52
LTBR-204ENST00000444814 CEP152O94986 1710 aa18.32■□□□□ 0.52
LTBR-204ENST00000444814 FBXO31Q5XUX0 539 aaPredicted RBP18.31■□□□□ 0.52
LTBR-204ENST00000444814 A2ML1A8K2U0 1454 aa18.3■□□□□ 0.52
LTBR-204ENST00000444814 ERVK-7P63135 1459 aa18.3■□□□□ 0.52
LTBR-204ENST00000444814 HSPA2P54652 639 aa18.3■□□□□ 0.52
LTBR-204ENST00000444814 GCC2Q8IWJ2 1684 aa18.3■□□□□ 0.52
LTBR-204ENST00000444814 MYO3AQ8NEV4 1616 aa18.29■□□□□ 0.52
LTBR-204ENST00000444814 SPATA31D1Q6ZQQ2 1576 aa18.29■□□□□ 0.52
LTBR-204ENST00000444814 EFCAB6Q5THR3 1501 aa18.28■□□□□ 0.52
LTBR-204ENST00000444814 THEMISQ8N1K5 641 aaPredicted RBP18.28■□□□□ 0.52
LTBR-204ENST00000444814 CEP170BQ9Y4F5 1589 aaPredicted RBP18.28■□□□□ 0.52
LTBR-204ENST00000444814 TRIM52Q96A61 297 aa18.27■□□□□ 0.52
LTBR-204ENST00000444814 TET3O43151 1660 aa18.26■□□□□ 0.51
LTBR-204ENST00000444814 ZNF142P52746 1687 aaPredicted RBP18.26■□□□□ 0.51
LTBR-204ENST00000444814 SLC52A1Q9NWF4 448 aa18.25■□□□□ 0.51
LTBR-204ENST00000444814 STAG3Q9UJ98 1225 aa18.25■□□□□ 0.51
LTBR-204ENST00000444814 IQGAP3Q86VI3 1631 aa18.25■□□□□ 0.51
LTBR-204ENST00000444814 PKD2Q13563 968 aa18.25■□□□□ 0.51
LTBR-204ENST00000444814 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
LTBR-204ENST00000444814 UGGT1Q9NYU2 1555 aa18.22■□□□□ 0.51
LTBR-204ENST00000444814 SETD5Q9C0A6 1442 aa18.21■□□□□ 0.51
LTBR-204ENST00000444814 NOS1P29475 1434 aa18.2■□□□□ 0.5
LTBR-204ENST00000444814 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
LTBR-204ENST00000444814 HDGFP51858 240 aaKnown RBP18.18■□□□□ 0.5
LTBR-204ENST00000444814 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
LTBR-204ENST00000444814 PTPRTO14522 1441 aa18.17■□□□□ 0.5
LTBR-204ENST00000444814 EID1Q9Y6B2 187 aa18.17■□□□□ 0.5
LTBR-204ENST00000444814 HRCP23327 699 aa18.14■□□□□ 0.49
LTBR-204ENST00000444814 IDI1Q13907 227 aa18.14■□□□□ 0.49
LTBR-204ENST00000444814 CFAP65Q6ZU64 1925 aaKnown RBP18.12■□□□□ 0.49
LTBR-204ENST00000444814 E9PCH4 1651 aa18.12■□□□□ 0.49
LTBR-204ENST00000444814 KDM5AP29375 1690 aaKnown RBP18.12■□□□□ 0.49
LTBR-204ENST00000444814 NCKAP5LQ9HCH0 1330 aa18.11■□□□□ 0.49
LTBR-204ENST00000444814 SYNMO15061 1565 aa18.11■□□□□ 0.49
LTBR-204ENST00000444814 RAB3GAP2Q9H2M9 1393 aa18.11■□□□□ 0.49
LTBR-204ENST00000444814 CHGAP10645 457 aaKnown RBP18.1■□□□□ 0.49
LTBR-204ENST00000444814 ADGRB3O60242 1522 aa18.09■□□□□ 0.49
LTBR-204ENST00000444814 TXNDC2Q86VQ3 553 aa18.08■□□□□ 0.49
LTBR-204ENST00000444814 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.08■□□□□ 0.49
LTBR-204ENST00000444814 MPHOSPH9Q99550 1183 aa18.08■□□□□ 0.49
LTBR-204ENST00000444814 PIK3C2BO00750 1634 aa18.08■□□□□ 0.49
LTBR-204ENST00000444814 TMEM2Q9UHN6 1383 aa18.08■□□□□ 0.49
LTBR-204ENST00000444814 UBR1Q8IWV7 1749 aa18.08■□□□□ 0.48
LTBR-204ENST00000444814 STRCQ7RTU9 1775 aa18.07■□□□□ 0.48
LTBR-204ENST00000444814 SLIT1O75093 1534 aa18.07■□□□□ 0.48
LTBR-204ENST00000444814 SCAF11Q99590 1463 aaKnown RBP18.07■□□□□ 0.48
LTBR-204ENST00000444814 NPHP4O75161 1426 aaPredicted RBP18.06■□□□□ 0.48
LTBR-204ENST00000444814 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
LTBR-204ENST00000444814 POLR1AO95602 1720 aaPredicted RBP18.05■□□□□ 0.48
LTBR-204ENST00000444814 SPHKAPQ2M3C7 1700 aa18.05■□□□□ 0.48
LTBR-204ENST00000444814 MED14O60244 1454 aa18.05■□□□□ 0.48
LTBR-204ENST00000444814 ARHGAP23Q9P227 1491 aa18.05■□□□□ 0.48
LTBR-204ENST00000444814 TRIM26Q12899 539 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms