RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 ERBINQ96RT1 1412 aa18.68■□□□□ 0.58
USP1-203ENST00000442679 RIMS1Q86UR5 1692 aaKnown RBP18.68■□□□□ 0.58
USP1-203ENST00000442679 FER1L4A9Z1Z3 1794 aa18.67■□□□□ 0.58
USP1-203ENST00000442679 CNTLNQ9NXG0 1405 aa18.66■□□□□ 0.58
USP1-203ENST00000442679 CEBPAP49715 358 aaPredicted RBP18.66■□□□□ 0.58
USP1-203ENST00000442679 WASHC2CQ9Y4E1 1318 aa18.65■□□□□ 0.58
USP1-203ENST00000442679 EIF2AK4Q9P2K8 1649 aaKnown RBP18.64■□□□□ 0.57
USP1-203ENST00000442679 ANKRD50Q9ULJ7 1429 aa18.64■□□□□ 0.57
USP1-203ENST00000442679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.57
USP1-203ENST00000442679 ZMYM3Q14202 1370 aa18.62■□□□□ 0.57
USP1-203ENST00000442679 RNF17Q9BXT8 1623 aaKnown RBP18.6■□□□□ 0.57
USP1-203ENST00000442679 CLTCQ00610 1675 aaKnown RBP18.59■□□□□ 0.57
USP1-203ENST00000442679 KDM5DQ9BY66 1539 aa18.58■□□□□ 0.56
USP1-203ENST00000442679 KANK1Q14678 1352 aa18.57■□□□□ 0.56
USP1-203ENST00000442679 FAM135AQ9P2D6 1515 aa18.57■□□□□ 0.56
USP1-203ENST00000442679 MROH1Q8NDA8 1641 aa18.56■□□□□ 0.56
USP1-203ENST00000442679 MROH2AA6NES4 1674 aa18.55■□□□□ 0.56
USP1-203ENST00000442679 NAIPQ13075 1403 aa18.55■□□□□ 0.56
USP1-203ENST00000442679 ABCC3O15438 1527 aa18.54■□□□□ 0.56
USP1-203ENST00000442679 PRDM15P57071 1507 aaPredicted RBP18.54■□□□□ 0.56
USP1-203ENST00000442679 C3P01024 1663 aa18.54■□□□□ 0.56
USP1-203ENST00000442679 DEPDC5O75140 1603 aa18.53■□□□□ 0.56
USP1-203ENST00000442679 HFM1A2PYH4 1435 aa18.53■□□□□ 0.56
USP1-203ENST00000442679 FBXO31Q5XUX0 539 aaPredicted RBP18.52■□□□□ 0.56
USP1-203ENST00000442679 NPATQ14207 1427 aa18.49■□□□□ 0.55
USP1-203ENST00000442679 NUP155O75694 1391 aa18.49■□□□□ 0.55
USP1-203ENST00000442679 PZPP20742 1482 aa18.49■□□□□ 0.55
USP1-203ENST00000442679 ZC3H13Q5T200 1668 aaKnown RBP18.49■□□□□ 0.55
USP1-203ENST00000442679 VWDEQ8N2E2 1590 aa18.48■□□□□ 0.55
USP1-203ENST00000442679 LMTK2Q8IWU2 1503 aa18.47■□□□□ 0.55
USP1-203ENST00000442679 UNC13BO14795 1591 aa18.47■□□□□ 0.55
USP1-203ENST00000442679 CEP152O94986 1710 aa18.46■□□□□ 0.55
USP1-203ENST00000442679 GCC2Q8IWJ2 1684 aa18.46■□□□□ 0.55
USP1-203ENST00000442679 TRIM52Q96A61 297 aa18.45■□□□□ 0.54
USP1-203ENST00000442679 ARHGAP31Q2M1Z3 1444 aa18.45■□□□□ 0.54
USP1-203ENST00000442679 UHRF1BP1Q6BDS2 1440 aa18.45■□□□□ 0.54
USP1-203ENST00000442679 CAMSAP1Q5T5Y3 1602 aa18.45■□□□□ 0.54
USP1-203ENST00000442679 TNRQ92752 1358 aa18.44■□□□□ 0.54
USP1-203ENST00000442679 LMTK3Q96Q04 1460 aa18.43■□□□□ 0.54
USP1-203ENST00000442679 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
USP1-203ENST00000442679 HSPA2P54652 639 aa18.41■□□□□ 0.54
USP1-203ENST00000442679 PREX1Q8TCU6 1659 aa18.41■□□□□ 0.54
USP1-203ENST00000442679 ERVK-7P63135 1459 aa18.4■□□□□ 0.54
USP1-203ENST00000442679 SETD1BQ9UPS6 1966 aaKnown RBP18.4■□□□□ 0.54
USP1-203ENST00000442679 EFCAB6Q5THR3 1501 aa18.39■□□□□ 0.54
USP1-203ENST00000442679 IQGAP3Q86VI3 1631 aa18.39■□□□□ 0.53
USP1-203ENST00000442679 SPATA31D1Q6ZQQ2 1576 aa18.38■□□□□ 0.53
USP1-203ENST00000442679 TET3O43151 1660 aa18.37■□□□□ 0.53
USP1-203ENST00000442679 RPRD2Q5VT52 1461 aaKnown RBP18.36■□□□□ 0.53
USP1-203ENST00000442679 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
USP1-203ENST00000442679 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
USP1-203ENST00000442679 TRIM26Q12899 539 aaPredicted RBP18.35■□□□□ 0.53
USP1-203ENST00000442679 SLC4A1APQ9BWU0 796 aaKnown RBP18.35■□□□□ 0.53
USP1-203ENST00000442679 MYO3AQ8NEV4 1616 aa18.34■□□□□ 0.53
USP1-203ENST00000442679 A2ML1A8K2U0 1454 aa18.34■□□□□ 0.53
USP1-203ENST00000442679 NLRP1Q9C000 1473 aa18.34■□□□□ 0.53
USP1-203ENST00000442679 NOS1P29475 1434 aa18.33■□□□□ 0.53
USP1-203ENST00000442679 CFAP65Q6ZU64 1925 aaKnown RBP18.32■□□□□ 0.52
USP1-203ENST00000442679 PKD2Q13563 968 aa18.32■□□□□ 0.52
USP1-203ENST00000442679 CEP170BQ9Y4F5 1589 aaPredicted RBP18.32■□□□□ 0.52
USP1-203ENST00000442679 HRCP23327 699 aa18.31■□□□□ 0.52
USP1-203ENST00000442679 IDI1Q13907 227 aa18.31■□□□□ 0.52
USP1-203ENST00000442679 THEMISQ8N1K5 641 aaPredicted RBP18.31■□□□□ 0.52
USP1-203ENST00000442679 SLC52A1Q9NWF4 448 aa18.31■□□□□ 0.52
USP1-203ENST00000442679 MPHOSPH9Q99550 1183 aa18.3■□□□□ 0.52
USP1-203ENST00000442679 E9PCH4 1651 aa18.3■□□□□ 0.52
USP1-203ENST00000442679 ZNF142P52746 1687 aaPredicted RBP18.28■□□□□ 0.52
USP1-203ENST00000442679 STAG3Q9UJ98 1225 aa18.28■□□□□ 0.52
USP1-203ENST00000442679 SYNMO15061 1565 aa18.28■□□□□ 0.52
USP1-203ENST00000442679 UGGT1Q9NYU2 1555 aa18.27■□□□□ 0.52
USP1-203ENST00000442679 PTPRTO14522 1441 aa18.25■□□□□ 0.51
USP1-203ENST00000442679 FOXD1Q16676 465 aa18.25■□□□□ 0.51
USP1-203ENST00000442679 NCKAP5LQ9HCH0 1330 aa18.24■□□□□ 0.51
USP1-203ENST00000442679 PLA2R1Q13018 1463 aa18.22■□□□□ 0.51
USP1-203ENST00000442679 CHGAP10645 457 aaKnown RBP18.22■□□□□ 0.51
USP1-203ENST00000442679 ANKLE2Q86XL3 938 aa18.22■□□□□ 0.51
USP1-203ENST00000442679 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
USP1-203ENST00000442679 PIK3C2BO00750 1634 aa18.21■□□□□ 0.51
USP1-203ENST00000442679 UBR1Q8IWV7 1749 aa18.19■□□□□ 0.5
USP1-203ENST00000442679 STRCQ7RTU9 1775 aa18.18■□□□□ 0.5
USP1-203ENST00000442679 ADGRB3O60242 1522 aa18.18■□□□□ 0.5
USP1-203ENST00000442679 TRPM2O94759 1503 aa18.18■□□□□ 0.5
USP1-203ENST00000442679 SPHKAPQ2M3C7 1700 aa18.18■□□□□ 0.5
USP1-203ENST00000442679 TMEM2Q9UHN6 1383 aa18.17■□□□□ 0.5
USP1-203ENST00000442679 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
USP1-203ENST00000442679 EID1Q9Y6B2 187 aa18.17■□□□□ 0.5
USP1-203ENST00000442679 LTKP29376 864 aa18.15■□□□□ 0.5
USP1-203ENST00000442679 KDM5AP29375 1690 aaKnown RBP18.15■□□□□ 0.5
USP1-203ENST00000442679 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.5
USP1-203ENST00000442679 SLIT1O75093 1534 aa18.14■□□□□ 0.49
USP1-203ENST00000442679 TMEM131LA2VDJ0 1609 aa18.13■□□□□ 0.49
USP1-203ENST00000442679 HDGFP51858 240 aaKnown RBP18.13■□□□□ 0.49
USP1-203ENST00000442679 ZNF326Q5BKZ1 582 aaKnown RBP18.12■□□□□ 0.49
USP1-203ENST00000442679 CLTCL1P53675 1640 aa18.12■□□□□ 0.49
USP1-203ENST00000442679 PCGF6Q9BYE7 350 aa18.11■□□□□ 0.49
USP1-203ENST00000442679 CCDC144AA2RUR9 1427 aa18.11■□□□□ 0.49
USP1-203ENST00000442679 SCAF11Q99590 1463 aaKnown RBP18.11■□□□□ 0.49
USP1-203ENST00000442679 NPHP4O75161 1426 aaPredicted RBP18.1■□□□□ 0.49
USP1-203ENST00000442679 RIMS2Q9UQ26 1411 aa18.1■□□□□ 0.49
USP1-203ENST00000442679 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms