RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 ARHGEF12Q9NZN5 1544 aa21.95■■□□□ 1.1
NLE1-202ENST00000442241 KDM5DQ9BY66 1539 aa21.95■■□□□ 1.1
NLE1-202ENST00000442241 UHRF1BP1Q6BDS2 1440 aa21.94■■□□□ 1.1
NLE1-202ENST00000442241 CCDC144AA2RUR9 1427 aa21.93■■□□□ 1.1
NLE1-202ENST00000442241 SHROOM2Q13796 1616 aa21.93■■□□□ 1.1
NLE1-202ENST00000442241 ABCC2Q92887 1545 aa21.92■■□□□ 1.1
NLE1-202ENST00000442241 ZBED9Q6R2W3 1325 aa21.91■■□□□ 1.1
NLE1-202ENST00000442241 RSPH4AQ5TD94 716 aa21.91■■□□□ 1.1
NLE1-202ENST00000442241 PLA2R1Q13018 1463 aa21.91■■□□□ 1.1
NLE1-202ENST00000442241 AFAP1Q8N556 730 aa21.89■■□□□ 1.09
NLE1-202ENST00000442241 MYO5CQ9NQX4 1742 aa21.88■■□□□ 1.09
NLE1-202ENST00000442241 TMC1Q8TDI8 760 aa21.88■■□□□ 1.09
NLE1-202ENST00000442241 SALL2Q9Y467 1007 aaPredicted RBP21.87■■□□□ 1.09
NLE1-202ENST00000442241 B4GALNT3Q6L9W6 998 aa21.86■■□□□ 1.09
NLE1-202ENST00000442241 TRAPPC8Q9Y2L5 1435 aa21.86■■□□□ 1.09
NLE1-202ENST00000442241 ZCCHC11Q5TAX3 1644 aaKnown RBP21.85■■□□□ 1.09
NLE1-202ENST00000442241 EFCAB2Q5VUJ9 269 aa21.85■■□□□ 1.09
NLE1-202ENST00000442241 MYT1LQ9UL68 1186 aa21.85■■□□□ 1.09
NLE1-202ENST00000442241 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
NLE1-202ENST00000442241 A2MP01023 1474 aa21.83■■□□□ 1.08
NLE1-202ENST00000442241 PNISRQ8TF01 805 aaKnown RBP21.81■■□□□ 1.08
NLE1-202ENST00000442241 PLCH2O75038 1416 aa21.81■■□□□ 1.08
NLE1-202ENST00000442241 ARID4BQ4LE39 1312 aaPredicted RBP21.79■■□□□ 1.08
NLE1-202ENST00000442241 CC2D1BQ5T0F9 858 aaKnown RBP21.79■■□□□ 1.08
NLE1-202ENST00000442241 UNC13BO14795 1591 aa21.79■■□□□ 1.08
NLE1-202ENST00000442241 MSH5O43196 834 aa21.78■■□□□ 1.08
NLE1-202ENST00000442241 MAST1Q9Y2H9 1570 aa21.77■■□□□ 1.08
NLE1-202ENST00000442241 TRPM1Q7Z4N2 1603 aa21.77■■□□□ 1.08
NLE1-202ENST00000442241 SPAG9O60271 1321 aaKnown RBP21.77■■□□□ 1.08
NLE1-202ENST00000442241 DISP3Q9P2K9 1392 aa21.76■■□□□ 1.07
NLE1-202ENST00000442241 PPP4R2Q9NY27 417 aa21.75■■□□□ 1.07
NLE1-202ENST00000442241 DUOX2Q9NRD8 1548 aa21.75■■□□□ 1.07
NLE1-202ENST00000442241 CLASP1Q7Z460 1538 aa21.74■■□□□ 1.07
NLE1-202ENST00000442241 PLXNC1O60486 1568 aa21.73■■□□□ 1.07
NLE1-202ENST00000442241 IQGAP3Q86VI3 1631 aa21.73■■□□□ 1.07
NLE1-202ENST00000442241 FANCIQ9NVI1 1328 aa21.73■■□□□ 1.07
NLE1-202ENST00000442241 TESK2Q96S53 571 aa21.72■■□□□ 1.07
NLE1-202ENST00000442241 MYBBP1AQ9BQG0 1328 aaKnown RBP21.72■■□□□ 1.07
NLE1-202ENST00000442241 ABCC1P33527 1531 aa21.71■■□□□ 1.07
NLE1-202ENST00000442241 PANK3Q9H999 370 aa21.7■■□□□ 1.06
NLE1-202ENST00000442241 NUDCQ9Y266 331 aa21.7■■□□□ 1.06
NLE1-202ENST00000442241 ERBINQ96RT1 1412 aa21.68■■□□□ 1.06
NLE1-202ENST00000442241 KIF3BO15066 747 aa21.67■■□□□ 1.06
NLE1-202ENST00000442241 SMG6Q86US8 1419 aaKnown RBP21.67■■□□□ 1.06
NLE1-202ENST00000442241 PER1O15534 1290 aaPredicted RBP21.66■■□□□ 1.06
NLE1-202ENST00000442241 RALBP1Q15311 655 aa21.66■■□□□ 1.06
NLE1-202ENST00000442241 KTN1Q86UP2 1357 aaKnown RBP21.65■■□□□ 1.06
NLE1-202ENST00000442241 E9PCH4 1651 aa21.65■■□□□ 1.06
NLE1-202ENST00000442241 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.05
NLE1-202ENST00000442241 SCAPERQ9BY12 1400 aa21.63■■□□□ 1.05
NLE1-202ENST00000442241 BRD4O60885 1362 aaPredicted RBP21.63■■□□□ 1.05
NLE1-202ENST00000442241 GPRASP1Q5JY77 1395 aa21.63■■□□□ 1.05
NLE1-202ENST00000442241 MAGI2Q86UL8 1455 aa21.62■■□□□ 1.05
NLE1-202ENST00000442241 TMF1P82094 1093 aa21.61■■□□□ 1.05
NLE1-202ENST00000442241 PRDM15P57071 1507 aaPredicted RBP21.61■■□□□ 1.05
NLE1-202ENST00000442241 COL17A1Q9UMD9 1497 aaPredicted RBP21.61■■□□□ 1.05
NLE1-202ENST00000442241 NLRP13Q86W25 1043 aa21.6■■□□□ 1.05
NLE1-202ENST00000442241 LRPPRCP42704 1394 aaKnown RBP21.6■■□□□ 1.05
NLE1-202ENST00000442241 FANCAO15360 1455 aa21.6■■□□□ 1.05
NLE1-202ENST00000442241 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
NLE1-202ENST00000442241 PARD3Q8TEW0 1356 aa21.59■■□□□ 1.05
NLE1-202ENST00000442241 CDCA7LQ96GN5 454 aa21.59■■□□□ 1.05
NLE1-202ENST00000442241 ATP10AO60312 1499 aa21.58■■□□□ 1.05
NLE1-202ENST00000442241 WDR7Q9Y4E6 1490 aa21.58■■□□□ 1.05
NLE1-202ENST00000442241 ERICH6BQ5W0A0 696 aa21.57■■□□□ 1.04
NLE1-202ENST00000442241 UGGT1Q9NYU2 1555 aa21.55■■□□□ 1.04
NLE1-202ENST00000442241 CCDC136Q96JN2 1154 aa21.54■■□□□ 1.04
NLE1-202ENST00000442241 ADGRL1O94910 1474 aa21.53■■□□□ 1.04
NLE1-202ENST00000442241 CLTCL1P53675 1640 aa21.53■■□□□ 1.04
NLE1-202ENST00000442241 CHGAP10645 457 aaKnown RBP21.53■■□□□ 1.04
NLE1-202ENST00000442241 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
NLE1-202ENST00000442241 ATP7AQ04656 1500 aa21.52■■□□□ 1.04
NLE1-202ENST00000442241 EIF2AK4Q9P2K8 1649 aaKnown RBP21.52■■□□□ 1.03
NLE1-202ENST00000442241 CFAP70Q5T0N1 1121 aa21.51■■□□□ 1.03
NLE1-202ENST00000442241 ASXL2Q76L83 1435 aa21.51■■□□□ 1.03
NLE1-202ENST00000442241 MADDQ8WXG6 1647 aa21.5■■□□□ 1.03
NLE1-202ENST00000442241 RTEL1-TNFRSF6BF6WH68 1400 aa21.49■■□□□ 1.03
NLE1-202ENST00000442241 RNF123Q5XPI4 1314 aa21.48■■□□□ 1.03
NLE1-202ENST00000442241 KANK1Q14678 1352 aa21.48■■□□□ 1.03
NLE1-202ENST00000442241 SPHKAPQ2M3C7 1700 aa21.48■■□□□ 1.03
NLE1-202ENST00000442241 ADGRF5Q8IZF2 1346 aa21.48■■□□□ 1.03
NLE1-202ENST00000442241 TRPM2O94759 1503 aa21.47■■□□□ 1.03
NLE1-202ENST00000442241 PLIN1O60240 522 aa21.47■■□□□ 1.03
NLE1-202ENST00000442241 KNSTRNQ9Y448 316 aa21.47■■□□□ 1.03
NLE1-202ENST00000442241 LAMC1P11047 1609 aa21.46■■□□□ 1.03
NLE1-202ENST00000442241 CFAP65Q6ZU64 1925 aaKnown RBP21.46■■□□□ 1.03
NLE1-202ENST00000442241 EXOC6Q8TAG9 804 aa21.46■■□□□ 1.03
NLE1-202ENST00000442241 GGT6Q6P531 493 aa21.46■■□□□ 1.03
NLE1-202ENST00000442241 ERICH6Q7L0X2 663 aa21.45■■□□□ 1.03
NLE1-202ENST00000442241 RCAN3Q9UKA8 241 aa21.45■■□□□ 1.03
NLE1-202ENST00000442241 ADAMTS8Q9UP79 889 aa21.45■■□□□ 1.03
NLE1-202ENST00000442241 RNF17Q9BXT8 1623 aaKnown RBP21.45■■□□□ 1.02
NLE1-202ENST00000442241 ABCA9Q8IUA7 1624 aa21.45■■□□□ 1.02
NLE1-202ENST00000442241 RRP1P56182 461 aaKnown RBP21.44■■□□□ 1.02
NLE1-202ENST00000442241 PTPRTO14522 1441 aa21.44■■□□□ 1.02
NLE1-202ENST00000442241 INO80Q9ULG1 1556 aaPredicted RBP21.43■■□□□ 1.02
NLE1-202ENST00000442241 CEP152O94986 1710 aa21.43■■□□□ 1.02
NLE1-202ENST00000442241 NUTM2DQ5VT03 806 aaPredicted RBP21.43■■□□□ 1.02
NLE1-202ENST00000442241 NPM1P06748 294 aaKnown RBP eCLIP21.42■■□□□ 1.02
NLE1-202ENST00000442241 PPP2R1AP30153 589 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms