RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 DEPDC5O75140 1603 aa10.51□□□□□ -0.73
HDAC6-210ENST00000441703 LRRIQ1Q96JM4 1722 aa10.51□□□□□ -0.73
HDAC6-210ENST00000441703 STRCP1A6NGW2 1772 aa10.5□□□□□ -0.73
HDAC6-210ENST00000441703 ATP7AQ04656 1500 aa10.5□□□□□ -0.73
HDAC6-210ENST00000441703 PLXNC1O60486 1568 aa10.5□□□□□ -0.73
HDAC6-210ENST00000441703 FAM135BQ49AJ0 1406 aa10.5□□□□□ -0.73
HDAC6-210ENST00000441703 UGGT1Q9NYU2 1555 aa10.49□□□□□ -0.73
HDAC6-210ENST00000441703 CDC42BPAQ5VT25 1732 aa10.48□□□□□ -0.73
HDAC6-210ENST00000441703 MEX3CQ5U5Q3 659 aaKnown RBP10.48□□□□□ -0.73
HDAC6-210ENST00000441703 FBXO31Q5XUX0 539 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-210ENST00000441703 SYCP2Q9BX26 1530 aa10.48□□□□□ -0.73
HDAC6-210ENST00000441703 ZNF772Q68DY9 489 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-210ENST00000441703 NLRP1Q9C000 1473 aa10.47□□□□□ -0.73
HDAC6-210ENST00000441703 HNRNPMP52272 730 aaKnown RBP eCLIP10.46□□□□□ -0.73
HDAC6-210ENST00000441703 PZPP20742 1482 aa10.46□□□□□ -0.74
HDAC6-210ENST00000441703 ARHGAP35Q9NRY4 1499 aa10.46□□□□□ -0.74
HDAC6-210ENST00000441703 INO80Q9ULG1 1556 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-210ENST00000441703 FOXD1Q16676 465 aa10.45□□□□□ -0.74
HDAC6-210ENST00000441703 ADGBQ8N7X0 1667 aa10.44□□□□□ -0.74
HDAC6-210ENST00000441703 ROBO1Q9Y6N7 1651 aa10.44□□□□□ -0.74
HDAC6-210ENST00000441703 MIA2Q96PC5 1412 aa10.44□□□□□ -0.74
HDAC6-210ENST00000441703 JCADQ9P266 1359 aa10.44□□□□□ -0.74
HDAC6-210ENST00000441703 CCDC18Q5T9S5 1454 aa10.43□□□□□ -0.74
HDAC6-210ENST00000441703 RXRBP28702 533 aa10.43□□□□□ -0.74
HDAC6-210ENST00000441703 KDM5DQ9BY66 1539 aa10.43□□□□□ -0.74
HDAC6-210ENST00000441703 LRRC9Q6ZRR7 1453 aa10.42□□□□□ -0.74
HDAC6-210ENST00000441703 PLEKHH2Q8IVE3 1493 aa10.42□□□□□ -0.74
HDAC6-210ENST00000441703 WASHC2CQ9Y4E1 1318 aa10.42□□□□□ -0.74
HDAC6-210ENST00000441703 PELP1Q8IZL8 1130 aaKnown RBP10.42□□□□□ -0.74
HDAC6-210ENST00000441703 CHIC1Q5VXU3 224 aa10.41□□□□□ -0.74
HDAC6-210ENST00000441703 XIRP1Q702N8 1843 aaKnown RBP10.41□□□□□ -0.74
HDAC6-210ENST00000441703 PHLPP1O60346 1717 aa10.41□□□□□ -0.74
HDAC6-210ENST00000441703 KIF3BO15066 747 aa10.4□□□□□ -0.74
HDAC6-210ENST00000441703 ZC3H13Q5T200 1668 aaKnown RBP10.4□□□□□ -0.74
HDAC6-210ENST00000441703 KIAA1107Q9UPP5 1409 aa10.4□□□□□ -0.75
HDAC6-210ENST00000441703 ZRANB1Q9UGI0 708 aa10.39□□□□□ -0.75
HDAC6-210ENST00000441703 SPATA31A6Q5VVP1 1343 aa10.38□□□□□ -0.75
HDAC6-210ENST00000441703 SRCAPQ6ZRS2 3230 aa10.38□□□□□ -0.75
HDAC6-210ENST00000441703 SCAF11Q99590 1463 aaKnown RBP10.38□□□□□ -0.75
HDAC6-210ENST00000441703 CFDP1Q9UEE9 299 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-210ENST00000441703 TMEM94Q12767 1356 aa10.38□□□□□ -0.75
HDAC6-210ENST00000441703 CDK12Q9NYV4 1490 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-210ENST00000441703 CASKIN1Q8WXD9 1431 aa10.37□□□□□ -0.75
HDAC6-210ENST00000441703 DHX29Q7Z478 1369 aaKnown RBP10.37□□□□□ -0.75
HDAC6-210ENST00000441703 NUTM2BA6NNL0 878 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-210ENST00000441703 NUTM2EB1AL46 878 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-210ENST00000441703 UBTFP17480 764 aaKnown RBP10.36□□□□□ -0.75
HDAC6-210ENST00000441703 NUTM2DQ5VT03 806 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-210ENST00000441703 TXNDC2Q86VQ3 553 aa10.36□□□□□ -0.75
HDAC6-210ENST00000441703 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-210ENST00000441703 NUTM2AQ8IVF1 878 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-210ENST00000441703 EID1Q9Y6B2 187 aa10.36□□□□□ -0.75
HDAC6-210ENST00000441703 GPATCH8Q9UKJ3 1502 aaKnown RBP10.36□□□□□ -0.75
HDAC6-210ENST00000441703 LRP6O75581 1613 aa10.36□□□□□ -0.75
HDAC6-210ENST00000441703 HRCP23327 699 aa10.35□□□□□ -0.75
HDAC6-210ENST00000441703 MSH6P52701 1360 aa10.35□□□□□ -0.75
HDAC6-210ENST00000441703 EHMT2Q96KQ7 1210 aa10.34□□□□□ -0.75
HDAC6-210ENST00000441703 FGD6Q6ZV73 1430 aa10.33□□□□□ -0.76
HDAC6-210ENST00000441703 CCNB3Q8WWL7 1395 aa10.33□□□□□ -0.76
HDAC6-210ENST00000441703 FYCO1Q9BQS8 1478 aa10.33□□□□□ -0.76
HDAC6-210ENST00000441703 RTEL1-TNFRSF6BF6WH68 1400 aa10.33□□□□□ -0.76
HDAC6-210ENST00000441703 KCNA6P17658 529 aa10.32□□□□□ -0.76
HDAC6-210ENST00000441703 LTKP29376 864 aa10.32□□□□□ -0.76
HDAC6-210ENST00000441703 RBM33Q96EV2 1170 aaKnown RBP10.32□□□□□ -0.76
HDAC6-210ENST00000441703 SLAIN2Q9P270 581 aa10.32□□□□□ -0.76
HDAC6-210ENST00000441703 UBR1Q8IWV7 1749 aa10.32□□□□□ -0.76
HDAC6-210ENST00000441703 COL16A1Q07092 1604 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-210ENST00000441703 MAP3K1Q13233 1512 aa10.32□□□□□ -0.76
HDAC6-210ENST00000441703 SETBP1Q9Y6X0 1596 aa10.31□□□□□ -0.76
HDAC6-210ENST00000441703 ERVK-7P63135 1459 aa10.3□□□□□ -0.76
HDAC6-210ENST00000441703 ATAD2Q6PL18 1390 aa10.3□□□□□ -0.76
HDAC6-210ENST00000441703 RGS12O14924 1447 aa10.3□□□□□ -0.76
HDAC6-210ENST00000441703 AFF2P51816 1311 aa10.3□□□□□ -0.76
HDAC6-210ENST00000441703 SLIT1O75093 1534 aa10.29□□□□□ -0.76
HDAC6-210ENST00000441703 PRDM15P57071 1507 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-210ENST00000441703 RBM6P78332 1123 aaKnown RBP10.29□□□□□ -0.76
HDAC6-210ENST00000441703 STAG3Q9UJ98 1225 aa10.29□□□□□ -0.76
HDAC6-210ENST00000441703 TIAM1Q13009 1591 aa10.29□□□□□ -0.76
HDAC6-210ENST00000441703 ARHGAP23Q9P227 1491 aa10.29□□□□□ -0.76
HDAC6-210ENST00000441703 SHPRHQ149N8 1683 aa10.28□□□□□ -0.76
HDAC6-210ENST00000441703 NCOA2Q15596 1464 aa10.28□□□□□ -0.76
HDAC6-210ENST00000441703 NKTRP30414 1462 aaKnown RBP10.27□□□□□ -0.77
HDAC6-210ENST00000441703 MBD5Q9P267 1494 aa10.27□□□□□ -0.77
HDAC6-210ENST00000441703 BCANQ96GW7 911 aa10.26□□□□□ -0.77
HDAC6-210ENST00000441703 NGLY1Q96IV0 654 aa10.26□□□□□ -0.77
HDAC6-210ENST00000441703 QTRT2Q9H974 415 aaKnown RBP10.26□□□□□ -0.77
HDAC6-210ENST00000441703 ABCC3O15438 1527 aa10.26□□□□□ -0.77
HDAC6-210ENST00000441703 ZNF644Q9H582 1327 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-210ENST00000441703 C14orf37Q86TY3 774 aa10.25□□□□□ -0.77
HDAC6-210ENST00000441703 SLC26A8Q96RN1 970 aa10.25□□□□□ -0.77
HDAC6-210ENST00000441703 CFAP65Q6ZU64 1925 aaKnown RBP10.25□□□□□ -0.77
HDAC6-210ENST00000441703 CCDC141Q6ZP82 1450 aa10.24□□□□□ -0.77
HDAC6-210ENST00000441703 C8orf37Q96NL8 207 aa10.24□□□□□ -0.77
HDAC6-210ENST00000441703 AHDC1Q5TGY3 1603 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-210ENST00000441703 KDM5AP29375 1690 aaKnown RBP10.24□□□□□ -0.77
HDAC6-210ENST00000441703 TMEM2Q9UHN6 1383 aa10.24□□□□□ -0.77
HDAC6-210ENST00000441703 NWD1Q149M9 1564 aa10.23□□□□□ -0.77
HDAC6-210ENST00000441703 MTUS2Q5JR59 1369 aa10.23□□□□□ -0.77
HDAC6-210ENST00000441703 EHBP1L1Q8N3D4 1523 aa10.22□□□□□ -0.77
HDAC6-210ENST00000441703 ATF3P18847 181 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms