RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 ADGRL2O95490 1459 aa24.43■■□□□ 1.5
TRAPPC12-209ENST00000441099 ERBINQ96RT1 1412 aa24.43■■□□□ 1.5
TRAPPC12-209ENST00000441099 CROCC2H7BZ55 1655 aa24.41■■□□□ 1.5
TRAPPC12-209ENST00000441099 HSPA2P54652 639 aa24.41■■□□□ 1.5
TRAPPC12-209ENST00000441099 NPATQ14207 1427 aa24.41■■□□□ 1.5
TRAPPC12-209ENST00000441099 RRBP1Q9P2E9 1410 aaKnown RBP24.38■■□□□ 1.49
TRAPPC12-209ENST00000441099 C3P01024 1663 aa24.38■■□□□ 1.49
TRAPPC12-209ENST00000441099 KDM5DQ9BY66 1539 aa24.38■■□□□ 1.49
TRAPPC12-209ENST00000441099 FAM135AQ9P2D6 1515 aa24.38■■□□□ 1.49
TRAPPC12-209ENST00000441099 UHRF1BP1Q6BDS2 1440 aa24.36■■□□□ 1.49
TRAPPC12-209ENST00000441099 MROH2AA6NES4 1674 aa24.36■■□□□ 1.49
TRAPPC12-209ENST00000441099 EIF2AK4Q9P2K8 1649 aaKnown RBP24.35■■□□□ 1.49
TRAPPC12-209ENST00000441099 CLTCQ00610 1675 aaKnown RBP24.35■■□□□ 1.49
TRAPPC12-209ENST00000441099 ITGAEP38570 1179 aa24.35■■□□□ 1.49
TRAPPC12-209ENST00000441099 RNF17Q9BXT8 1623 aaKnown RBP24.35■■□□□ 1.49
TRAPPC12-209ENST00000441099 ROCK1Q13464 1354 aa24.34■■□□□ 1.49
TRAPPC12-209ENST00000441099 FBXO31Q5XUX0 539 aaPredicted RBP24.34■■□□□ 1.49
TRAPPC12-209ENST00000441099 MROH1Q8NDA8 1641 aa24.32■■□□□ 1.48
TRAPPC12-209ENST00000441099 ABCC3O15438 1527 aa24.31■■□□□ 1.48
TRAPPC12-209ENST00000441099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.31■■□□□ 1.482e-9■□□□□ 8.5
TRAPPC12-209ENST00000441099 ANKRD50Q9ULJ7 1429 aa24.31■■□□□ 1.48
TRAPPC12-209ENST00000441099 PZPP20742 1482 aa24.31■■□□□ 1.48
TRAPPC12-209ENST00000441099 PREX1Q8TCU6 1659 aa24.27■■□□□ 1.48
TRAPPC12-209ENST00000441099 PRDM15P57071 1507 aaPredicted RBP24.26■■□□□ 1.47
TRAPPC12-209ENST00000441099 TNRQ92752 1358 aa24.26■■□□□ 1.47
TRAPPC12-209ENST00000441099 KANK1Q14678 1352 aa24.25■■□□□ 1.47
TRAPPC12-209ENST00000441099 SETD1BQ9UPS6 1966 aaKnown RBP24.22■■□□□ 1.47
TRAPPC12-209ENST00000441099 ARHGAP31Q2M1Z3 1444 aa24.21■■□□□ 1.47
TRAPPC12-209ENST00000441099 DEPDC5O75140 1603 aa24.2■■□□□ 1.46
TRAPPC12-209ENST00000441099 VWDEQ8N2E2 1590 aa24.2■■□□□ 1.46
TRAPPC12-209ENST00000441099 LMTK2Q8IWU2 1503 aa24.19■■□□□ 1.46
TRAPPC12-209ENST00000441099 ZC3H13Q5T200 1668 aaKnown RBP24.18■■□□□ 1.46
TRAPPC12-209ENST00000441099 A2ML1A8K2U0 1454 aa24.17■■□□□ 1.46
TRAPPC12-209ENST00000441099 ERVK-7P63135 1459 aa24.17■■□□□ 1.46
TRAPPC12-209ENST00000441099 SPATA31D1Q6ZQQ2 1576 aa24.14■■□□□ 1.45
TRAPPC12-209ENST00000441099 MYO3AQ8NEV4 1616 aa24.13■■□□□ 1.45
TRAPPC12-209ENST00000441099 CEP170BQ9Y4F5 1589 aaPredicted RBP24.13■■□□□ 1.45
TRAPPC12-209ENST00000441099 NLRP1Q9C000 1473 aa24.13■■□□□ 1.45
TRAPPC12-209ENST00000441099 DMRT2Q9Y5R5 561 aa24.12■■□□□ 1.45
TRAPPC12-209ENST00000441099 CAMSAP1Q5T5Y3 1602 aa24.11■■□□□ 1.45
TRAPPC12-209ENST00000441099 NAIPQ13075 1403 aa24.1■■□□□ 1.45
TRAPPC12-209ENST00000441099 CEP152O94986 1710 aa24.09■■□□□ 1.45
TRAPPC12-209ENST00000441099 NCKAP5LQ9HCH0 1330 aa24.09■■□□□ 1.45
TRAPPC12-209ENST00000441099 PLA2R1Q13018 1463 aa24.08■■□□□ 1.45
TRAPPC12-209ENST00000441099 NUP155O75694 1391 aa24.08■■□□□ 1.45
TRAPPC12-209ENST00000441099 PKD2Q13563 968 aa24.07■■□□□ 1.44
TRAPPC12-209ENST00000441099 THEMISQ8N1K5 641 aaPredicted RBP24.07■■□□□ 1.44
TRAPPC12-209ENST00000441099 ZNF142P52746 1687 aaPredicted RBP24.07■■□□□ 1.44
TRAPPC12-209ENST00000441099 HFM1A2PYH4 1435 aa24.06■■□□□ 1.44
TRAPPC12-209ENST00000441099 PTPRTO14522 1441 aa24.06■■□□□ 1.44
TRAPPC12-209ENST00000441099 EFCAB6Q5THR3 1501 aa24.05■■□□□ 1.44
TRAPPC12-209ENST00000441099 UNC13BO14795 1591 aa24.05■■□□□ 1.44
TRAPPC12-209ENST00000441099 NOS1P29475 1434 aa24.05■■□□□ 1.44
TRAPPC12-209ENST00000441099 STRCQ7RTU9 1775 aa24.03■■□□□ 1.44
TRAPPC12-209ENST00000441099 IDI1Q13907 227 aa24.02■■□□□ 1.44
TRAPPC12-209ENST00000441099 UGGT1Q9NYU2 1555 aa24.02■■□□□ 1.44
TRAPPC12-209ENST00000441099 RPRD2Q5VT52 1461 aaKnown RBP24.01■■□□□ 1.43
TRAPPC12-209ENST00000441099 ANKLE2Q86XL3 938 aa23.99■■□□□ 1.43
TRAPPC12-209ENST00000441099 SLC52A1Q9NWF4 448 aa23.98■■□□□ 1.43
TRAPPC12-209ENST00000441099 IQGAP3Q86VI3 1631 aa23.95■■□□□ 1.43
TRAPPC12-209ENST00000441099 TET3O43151 1660 aa23.95■■□□□ 1.42
TRAPPC12-209ENST00000441099 SYNMO15061 1565 aa23.94■■□□□ 1.42
TRAPPC12-209ENST00000441099 TRIM52Q96A61 297 aa23.91■■□□□ 1.42
TRAPPC12-209ENST00000441099 STAG3Q9UJ98 1225 aa23.91■■□□□ 1.42
TRAPPC12-209ENST00000441099 LTKP29376 864 aa23.9■■□□□ 1.42
TRAPPC12-209ENST00000441099 GCC2Q8IWJ2 1684 aa23.89■■□□□ 1.42
TRAPPC12-209ENST00000441099 ARHGAP23Q9P227 1491 aa23.89■■□□□ 1.42
TRAPPC12-209ENST00000441099 TMEM2Q9UHN6 1383 aa23.88■■□□□ 1.41
TRAPPC12-209ENST00000441099 MED14O60244 1454 aa23.87■■□□□ 1.41
TRAPPC12-209ENST00000441099 TXNDC2Q86VQ3 553 aa23.87■■□□□ 1.41
TRAPPC12-209ENST00000441099 CERKQ8TCT0 537 aa23.87■■□□□ 1.41
TRAPPC12-209ENST00000441099 NEURL4Q96JN8 1562 aa23.86■■□□□ 1.41
TRAPPC12-209ENST00000441099 NPHP4O75161 1426 aaPredicted RBP23.86■■□□□ 1.41
TRAPPC12-209ENST00000441099 SLIT1O75093 1534 aa23.86■■□□□ 1.41
TRAPPC12-209ENST00000441099 PIK3C2BO00750 1634 aa23.85■■□□□ 1.41
TRAPPC12-209ENST00000441099 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
TRAPPC12-209ENST00000441099 UBR1Q8IWV7 1749 aa23.84■■□□□ 1.41
TRAPPC12-209ENST00000441099 E9PCH4 1651 aa23.84■■□□□ 1.41
TRAPPC12-209ENST00000441099 SLC4A1APQ9BWU0 796 aaKnown RBP23.84■■□□□ 1.41
TRAPPC12-209ENST00000441099 EID1Q9Y6B2 187 aa23.84■■□□□ 1.41
TRAPPC12-209ENST00000441099 SCAF11Q99590 1463 aaKnown RBP23.83■■□□□ 1.41
TRAPPC12-209ENST00000441099 SETD5Q9C0A6 1442 aa23.83■■□□□ 1.4
TRAPPC12-209ENST00000441099 CFAP65Q6ZU64 1925 aaKnown RBP23.82■■□□□ 1.4
TRAPPC12-209ENST00000441099 ADGRB3O60242 1522 aa23.81■■□□□ 1.4
TRAPPC12-209ENST00000441099 ILDR1Q86SU0 546 aaPredicted RBP23.81■■□□□ 1.4
TRAPPC12-209ENST00000441099 LTBP4Q8N2S1 1624 aa23.8■■□□□ 1.4
TRAPPC12-209ENST00000441099 CHGAP10645 457 aaKnown RBP23.78■■□□□ 1.4
TRAPPC12-209ENST00000441099 FBXO41Q8TF61 875 aa23.77■■□□□ 1.4
TRAPPC12-209ENST00000441099 MPHOSPH9Q99550 1183 aa23.76■■□□□ 1.39
TRAPPC12-209ENST00000441099 ACIN1Q9UKV3 1341 aaKnown RBP23.76■■□□□ 1.39
TRAPPC12-209ENST00000441099 KDM5AP29375 1690 aaKnown RBP23.76■■□□□ 1.39
TRAPPC12-209ENST00000441099 RAB3GAP2Q9H2M9 1393 aa23.75■■□□□ 1.39
TRAPPC12-209ENST00000441099 ZFYVE9O95405 1425 aa23.75■■□□□ 1.39
TRAPPC12-209ENST00000441099 FOXD1Q16676 465 aa23.73■■□□□ 1.39
TRAPPC12-209ENST00000441099 RIMS2Q9UQ26 1411 aa23.73■■□□□ 1.39
TRAPPC12-209ENST00000441099 POLR1AO95602 1720 aaPredicted RBP23.73■■□□□ 1.39
TRAPPC12-209ENST00000441099 HDGFP51858 240 aaKnown RBP23.72■■□□□ 1.39
TRAPPC12-209ENST00000441099 TMEM131LA2VDJ0 1609 aa23.72■■□□□ 1.39
TRAPPC12-209ENST00000441099 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.7■■□□□ 1.38
TRAPPC12-209ENST00000441099 TRPM2O94759 1503 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms