RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 ADGRL2O95490 1459 aa34.21■■■■□ 3.07
CNOT3-203ENST00000440571 FER1L4A9Z1Z3 1794 aa34.21■■■■□ 3.07
CNOT3-203ENST00000440571 ZMYM3Q14202 1370 aa34.19■■■■□ 3.06
CNOT3-203ENST00000440571 ERBINQ96RT1 1412 aa34.18■■■■□ 3.06
CNOT3-203ENST00000440571 ROCK1Q13464 1354 aa34.17■■■■□ 3.06
CNOT3-203ENST00000440571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.14■■■■□ 3.063e-9■■■□□ 16.4
CNOT3-203ENST00000440571 ANKRD50Q9ULJ7 1429 aa34.1■■■■□ 3.05
CNOT3-203ENST00000440571 EIF2AK4Q9P2K8 1649 aaKnown RBP34.07■■■■□ 3.04
CNOT3-203ENST00000440571 KANK1Q14678 1352 aa34.03■■■■□ 3.04
CNOT3-203ENST00000440571 KDM5DQ9BY66 1539 aa34.01■■■■□ 3.04
CNOT3-203ENST00000440571 CLTCQ00610 1675 aaKnown RBP34■■■■□ 3.03
CNOT3-203ENST00000440571 RNF17Q9BXT8 1623 aaKnown RBP34■■■■□ 3.03
CNOT3-203ENST00000440571 FAM135AQ9P2D6 1515 aa33.99■■■■□ 3.03
CNOT3-203ENST00000440571 FBXO31Q5XUX0 539 aaPredicted RBP33.97■■■■□ 3.03
CNOT3-203ENST00000440571 MROH2AA6NES4 1674 aa33.96■■■■□ 3.03
CNOT3-203ENST00000440571 C3P01024 1663 aa33.96■■■■□ 3.03
CNOT3-203ENST00000440571 NPATQ14207 1427 aa33.96■■■■□ 3.03
CNOT3-203ENST00000440571 ABCC3O15438 1527 aa33.93■■■■□ 3.02
CNOT3-203ENST00000440571 MROH1Q8NDA8 1641 aa33.92■■■■□ 3.02
CNOT3-203ENST00000440571 UHRF1BP1Q6BDS2 1440 aa33.89■■■■□ 3.02
CNOT3-203ENST00000440571 PZPP20742 1482 aa33.88■■■■□ 3.01
CNOT3-203ENST00000440571 HSPA2P54652 639 aa33.88■■■■□ 3.01
CNOT3-203ENST00000440571 PRDM15P57071 1507 aaPredicted RBP33.88■■■■□ 3.01
CNOT3-203ENST00000440571 LMTK3Q96Q04 1460 aa33.87■■■■□ 3.01
CNOT3-203ENST00000440571 NAIPQ13075 1403 aa33.87■■■■□ 3.01
CNOT3-203ENST00000440571 SETD1BQ9UPS6 1966 aaKnown RBP33.85■■■■□ 3.01
CNOT3-203ENST00000440571 DEPDC5O75140 1603 aa33.83■■■■□ 3.01
CNOT3-203ENST00000440571 NUP155O75694 1391 aa33.83■■■■□ 3.01
CNOT3-203ENST00000440571 TNRQ92752 1358 aa33.83■■■■□ 3.01
CNOT3-203ENST00000440571 HFM1A2PYH4 1435 aa33.81■■■■□ 3
CNOT3-203ENST00000440571 ZC3H13Q5T200 1668 aaKnown RBP33.8■■■■□ 3
CNOT3-203ENST00000440571 ARHGAP31Q2M1Z3 1444 aa33.8■■■■□ 3
CNOT3-203ENST00000440571 LMTK2Q8IWU2 1503 aa33.78■■■■□ 3
CNOT3-203ENST00000440571 VWDEQ8N2E2 1590 aa33.77■■■■□ 3
CNOT3-203ENST00000440571 TRIM52Q96A61 297 aa33.75■■■□□ 2.99
CNOT3-203ENST00000440571 PREX1Q8TCU6 1659 aa33.74■■■□□ 2.99
CNOT3-203ENST00000440571 CEP152O94986 1710 aa33.73■■■□□ 2.99
CNOT3-203ENST00000440571 CAMSAP1Q5T5Y3 1602 aa33.71■■■□□ 2.99
CNOT3-203ENST00000440571 ERVK-7P63135 1459 aa33.7■■■□□ 2.99
CNOT3-203ENST00000440571 UNC13BO14795 1591 aa33.69■■■□□ 2.98
CNOT3-203ENST00000440571 SPATA31D1Q6ZQQ2 1576 aa33.65■■■□□ 2.98
CNOT3-203ENST00000440571 A2ML1A8K2U0 1454 aa33.64■■■□□ 2.98
CNOT3-203ENST00000440571 THEMISQ8N1K5 641 aaPredicted RBP33.64■■■□□ 2.98
CNOT3-203ENST00000440571 NLRP1Q9C000 1473 aa33.63■■■□□ 2.97
CNOT3-203ENST00000440571 EFCAB6Q5THR3 1501 aa33.62■■■□□ 2.97
CNOT3-203ENST00000440571 SETD5Q9C0A6 1442 aa33.62■■■□□ 2.97
CNOT3-203ENST00000440571 GCC2Q8IWJ2 1684 aa33.61■■■□□ 2.97
CNOT3-203ENST00000440571 RPRD2Q5VT52 1461 aaKnown RBP33.6■■■□□ 2.97
CNOT3-203ENST00000440571 IDI1Q13907 227 aa33.59■■■□□ 2.97
CNOT3-203ENST00000440571 MYO3AQ8NEV4 1616 aa33.59■■■□□ 2.97
CNOT3-203ENST00000440571 ACIN1Q9UKV3 1341 aaKnown RBP33.58■■■□□ 2.97
CNOT3-203ENST00000440571 SLC52A1Q9NWF4 448 aa33.58■■■□□ 2.97
CNOT3-203ENST00000440571 CEP170BQ9Y4F5 1589 aaPredicted RBP33.58■■■□□ 2.97
CNOT3-203ENST00000440571 NOS1P29475 1434 aa33.57■■■□□ 2.96
CNOT3-203ENST00000440571 SLC4A1APQ9BWU0 796 aaKnown RBP33.57■■■□□ 2.96
CNOT3-203ENST00000440571 STAG3Q9UJ98 1225 aa33.57■■■□□ 2.96
CNOT3-203ENST00000440571 DMRT2Q9Y5R5 561 aa33.57■■■□□ 2.96
CNOT3-203ENST00000440571 IQGAP3Q86VI3 1631 aa33.57■■■□□ 2.96
CNOT3-203ENST00000440571 CFAP65Q6ZU64 1925 aaKnown RBP33.55■■■□□ 2.96
CNOT3-203ENST00000440571 TET3O43151 1660 aa33.55■■■□□ 2.96
CNOT3-203ENST00000440571 NCKAP5LQ9HCH0 1330 aa33.53■■■□□ 2.96
CNOT3-203ENST00000440571 PKD2Q13563 968 aa33.52■■■□□ 2.96
CNOT3-203ENST00000440571 UGGT1Q9NYU2 1555 aa33.5■■■□□ 2.95
CNOT3-203ENST00000440571 ANKLE2Q86XL3 938 aa33.49■■■□□ 2.95
CNOT3-203ENST00000440571 RAB3GAP2Q9H2M9 1393 aa33.48■■■□□ 2.95
CNOT3-203ENST00000440571 ZNF142P52746 1687 aaPredicted RBP33.48■■■□□ 2.95
CNOT3-203ENST00000440571 MPHOSPH9Q99550 1183 aa33.47■■■□□ 2.95
CNOT3-203ENST00000440571 PLA2R1Q13018 1463 aa33.45■■■□□ 2.95
CNOT3-203ENST00000440571 HRCP23327 699 aa33.44■■■□□ 2.94
CNOT3-203ENST00000440571 CHGAP10645 457 aaKnown RBP33.42■■■□□ 2.94
CNOT3-203ENST00000440571 SYNMO15061 1565 aa33.42■■■□□ 2.94
CNOT3-203ENST00000440571 E9PCH4 1651 aa33.42■■■□□ 2.94
CNOT3-203ENST00000440571 EID1Q9Y6B2 187 aa33.38■■■□□ 2.93
CNOT3-203ENST00000440571 PTPRTO14522 1441 aa33.37■■■□□ 2.93
CNOT3-203ENST00000440571 TRIM26Q12899 539 aaPredicted RBP33.37■■■□□ 2.93
CNOT3-203ENST00000440571 FOXD1Q16676 465 aa33.37■■■□□ 2.93
CNOT3-203ENST00000440571 TXNDC2Q86VQ3 553 aa33.37■■■□□ 2.93
CNOT3-203ENST00000440571 STRCQ7RTU9 1775 aa33.36■■■□□ 2.93
CNOT3-203ENST00000440571 TMEM2Q9UHN6 1383 aa33.33■■■□□ 2.93
CNOT3-203ENST00000440571 LTKP29376 864 aa33.32■■■□□ 2.92
CNOT3-203ENST00000440571 PIK3C2BO00750 1634 aa33.31■■■□□ 2.92
CNOT3-203ENST00000440571 HDGFP51858 240 aaKnown RBP33.3■■■□□ 2.92
CNOT3-203ENST00000440571 UBR1Q8IWV7 1749 aa33.28■■■□□ 2.92
CNOT3-203ENST00000440571 ARHGAP23Q9P227 1491 aa33.25■■■□□ 2.91
CNOT3-203ENST00000440571 ADGRB3O60242 1522 aa33.24■■■□□ 2.91
CNOT3-203ENST00000440571 SLIT1O75093 1534 aa33.24■■■□□ 2.91
CNOT3-203ENST00000440571 NPHP4O75161 1426 aaPredicted RBP33.23■■■□□ 2.91
CNOT3-203ENST00000440571 SCAF11Q99590 1463 aaKnown RBP33.22■■■□□ 2.91
CNOT3-203ENST00000440571 ZNF326Q5BKZ1 582 aaKnown RBP33.21■■■□□ 2.91
CNOT3-203ENST00000440571 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.21■■■□□ 2.913e-6■■□□□ 14.2
CNOT3-203ENST00000440571 MED14O60244 1454 aa33.19■■■□□ 2.9
CNOT3-203ENST00000440571 PPP1R15AO75807 674 aaPredicted RBP33.19■■■□□ 2.9
CNOT3-203ENST00000440571 KDM5AP29375 1690 aaKnown RBP33.19■■■□□ 2.9
CNOT3-203ENST00000440571 TRPM2O94759 1503 aa33.18■■■□□ 2.9
CNOT3-203ENST00000440571 SPHKAPQ2M3C7 1700 aa33.18■■■□□ 2.9
CNOT3-203ENST00000440571 BCANQ96GW7 911 aa33.17■■■□□ 2.9
CNOT3-203ENST00000440571 RIMS2Q9UQ26 1411 aa33.17■■■□□ 2.9
CNOT3-203ENST00000440571 TMEM131LA2VDJ0 1609 aa33.16■■■□□ 2.9
CNOT3-203ENST00000440571 NUTM2DQ5VT03 806 aaPredicted RBP33.15■■■□□ 2.9
CNOT3-203ENST00000440571 NEURL4Q96JN8 1562 aa33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms