RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 NLRP13Q86W25 1043 aa26.19■■□□□ 1.78
FMR1-208ENST00000440235 PTPRKQ15262 1439 aa26.19■■□□□ 1.78
FMR1-208ENST00000440235 SUPT6HQ7KZ85 1726 aaKnown RBP26.19■■□□□ 1.78
FMR1-208ENST00000440235 PNNQ9H307 717 aaKnown RBP26.19■■□□□ 1.78
FMR1-208ENST00000440235 IQGAP2Q13576 1575 aa26.19■■□□□ 1.78
FMR1-208ENST00000440235 POGKQ9P215 609 aa26.19■■□□□ 1.78
FMR1-208ENST00000440235 ANKRD30AQ9BXX3 1397 aa26.18■■□□□ 1.78
FMR1-208ENST00000440235 RALBP1Q15311 655 aa26.16■■□□□ 1.78
FMR1-208ENST00000440235 ZBED9Q6R2W3 1325 aa26.16■■□□□ 1.78
FMR1-208ENST00000440235 AMER1Q5JTC6 1135 aaPredicted RBP26.16■■□□□ 1.78
FMR1-208ENST00000440235 GOLGA2Q08379 1002 aa26.15■■□□□ 1.78
FMR1-208ENST00000440235 CTTNBP2Q8WZ74 1663 aa26.15■■□□□ 1.78
FMR1-208ENST00000440235 A0A0G2JS52 829 aa26.15■■□□□ 1.78
FMR1-208ENST00000440235 ITPRIPQ8IWB1 547 aa26.14■■□□□ 1.78
FMR1-208ENST00000440235 RRP1P56182 461 aaKnown RBP26.14■■□□□ 1.78
FMR1-208ENST00000440235 HECW1Q76N89 1606 aa26.14■■□□□ 1.78
FMR1-208ENST00000440235 IL27Q8NEV9 243 aa26.13■■□□□ 1.77
FMR1-208ENST00000440235 SRPK2P78362 688 aaKnown RBP26.13■■□□□ 1.77
FMR1-208ENST00000440235 NUTM2DQ5VT03 806 aaPredicted RBP26.12■■□□□ 1.77
FMR1-208ENST00000440235 PANK3Q9H999 370 aa26.12■■□□□ 1.77
FMR1-208ENST00000440235 CFAP43Q8NDM7 1665 aa26.11■■□□□ 1.77
FMR1-208ENST00000440235 PRG4Q92954 1404 aaPredicted RBP26.11■■□□□ 1.77
FMR1-208ENST00000440235 L1TD1Q5T7N2 865 aaKnown RBP26.11■■□□□ 1.77
FMR1-208ENST00000440235 ANO8Q9HCE9 1232 aaPredicted RBP26.11■■□□□ 1.77
FMR1-208ENST00000440235 WASHC2AQ641Q2 1341 aa26.1■■□□□ 1.77
FMR1-208ENST00000440235 GSE1Q14687 1217 aa26.08■■□□□ 1.77
FMR1-208ENST00000440235 PTPN23Q9H3S7 1636 aa26.08■■□□□ 1.77
FMR1-208ENST00000440235 COG6Q9Y2V7 657 aa26.08■■□□□ 1.77
FMR1-208ENST00000440235 KIF21AQ7Z4S6 1674 aa26.07■■□□□ 1.76
FMR1-208ENST00000440235 KIAA0586Q9BVV6 1533 aa26.07■■□□□ 1.76
FMR1-208ENST00000440235 GGT6Q6P531 493 aa26.07■■□□□ 1.76
FMR1-208ENST00000440235 CDCA7LQ96GN5 454 aa26.07■■□□□ 1.76
FMR1-208ENST00000440235 MIA2Q96PC5 1412 aa26.07■■□□□ 1.76
FMR1-208ENST00000440235 MSH5O43196 834 aa26.05■■□□□ 1.76
FMR1-208ENST00000440235 FOXD4L5Q5VV16 416 aaPredicted RBP26.05■■□□□ 1.76
FMR1-208ENST00000440235 FOXD4L4Q8WXT5 416 aaPredicted RBP26.05■■□□□ 1.76
FMR1-208ENST00000440235 MSNP26038 577 aaKnown RBP26.05■■□□□ 1.76
FMR1-208ENST00000440235 CASC1Q6TDU7 716 aa26.04■■□□□ 1.76
FMR1-208ENST00000440235 ELL2O00472 640 aaPredicted RBP26.03■■□□□ 1.76
FMR1-208ENST00000440235 NOL8Q76FK4 1167 aaKnown RBP26.03■■□□□ 1.76
FMR1-208ENST00000440235 PTPRGP23470 1445 aa26.03■■□□□ 1.76
FMR1-208ENST00000440235 KIF7Q2M1P5 1343 aa26.02■■□□□ 1.76
FMR1-208ENST00000440235 APAF1O14727 1248 aa26.02■■□□□ 1.76
FMR1-208ENST00000440235 GOLGA6L3A6NEY3 463 aa26.02■■□□□ 1.76
FMR1-208ENST00000440235 SMC4Q9NTJ3 1288 aa26.01■■□□□ 1.75
FMR1-208ENST00000440235 BRPF3Q9ULD4 1205 aa26■■□□□ 1.75
FMR1-208ENST00000440235 SKAP1Q86WV1 359 aa26■■□□□ 1.75
FMR1-208ENST00000440235 RWDD1Q9H446 243 aaPredicted RBP25.99■■□□□ 1.75
FMR1-208ENST00000440235 NBPF8Q3BBV2 869 aa25.99■■□□□ 1.75
FMR1-208ENST00000440235 DAPK1P53355 1430 aa25.99■■□□□ 1.75
FMR1-208ENST00000440235 LMOD2Q6P5Q4 547 aa25.98■■□□□ 1.75
FMR1-208ENST00000440235 FOXD4L6Q3SYB3 417 aaPredicted RBP25.97■■□□□ 1.75
FMR1-208ENST00000440235 FOXD4L3Q6VB84 417 aaPredicted RBP25.97■■□□□ 1.75
FMR1-208ENST00000440235 ABCA5Q8WWZ7 1642 aa25.97■■□□□ 1.75
FMR1-208ENST00000440235 MYBBP1AQ9BQG0 1328 aaKnown RBP25.97■■□□□ 1.75
FMR1-208ENST00000440235 THOC2Q8NI27 1593 aaKnown RBP25.97■■□□□ 1.75
FMR1-208ENST00000440235 GRIN2AQ12879 1464 aa25.96■■□□□ 1.75
FMR1-208ENST00000440235 PLB1Q6P1J6 1458 aa25.96■■□□□ 1.75
FMR1-208ENST00000440235 TROQ12816 1431 aaPredicted RBP25.96■■□□□ 1.75
FMR1-208ENST00000440235 NAP1L2Q9ULW6 460 aaPredicted RBP25.96■■□□□ 1.75
FMR1-208ENST00000440235 FAM161AQ3B820 660 aa25.96■■□□□ 1.75
FMR1-208ENST00000440235 CENPJQ9HC77 1338 aaPredicted RBP25.95■■□□□ 1.75
FMR1-208ENST00000440235 USP47Q96K76 1375 aa25.95■■□□□ 1.74
FMR1-208ENST00000440235 KCNJ4P48050 445 aa25.95■■□□□ 1.74
FMR1-208ENST00000440235 MLECQ14165 292 aa25.94■■□□□ 1.74
FMR1-208ENST00000440235 OS9Q13438 667 aaPredicted RBP25.94■■□□□ 1.74
FMR1-208ENST00000440235 UGGT2Q9NYU1 1516 aa25.93■■□□□ 1.74
FMR1-208ENST00000440235 PDE3BQ13370 1112 aa25.93■■□□□ 1.74
FMR1-208ENST00000440235 NFKBIBQ15653 356 aa25.92■■□□□ 1.74
FMR1-208ENST00000440235 MS4A1P11836 297 aa25.91■■□□□ 1.74
FMR1-208ENST00000440235 AKNAQ7Z591 1439 aa25.91■■□□□ 1.74
FMR1-208ENST00000440235 ANKRD50Q9ULJ7 1429 aa25.9■■□□□ 1.74
FMR1-208ENST00000440235 TRAK1Q9UPV9 953 aa25.9■■□□□ 1.74
FMR1-208ENST00000440235 ABCC5O15440 1437 aa25.89■■□□□ 1.74
FMR1-208ENST00000440235 CCDC7Q96M83 1385 aa25.89■■□□□ 1.74
FMR1-208ENST00000440235 USP35Q9P2H5 1018 aa25.88■■□□□ 1.73
FMR1-208ENST00000440235 FGD1P98174 961 aa25.88■■□□□ 1.73
FMR1-208ENST00000440235 VSIG10Q8N0Z9 540 aa25.88■■□□□ 1.73
FMR1-208ENST00000440235 GBP4Q96PP9 640 aa25.87■■□□□ 1.73
FMR1-208ENST00000440235 CENPQQ7L2Z9 268 aaPredicted RBP25.86■■□□□ 1.73
FMR1-208ENST00000440235 KIF15Q9NS87 1388 aa25.86■■□□□ 1.73
FMR1-208ENST00000440235 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
FMR1-208ENST00000440235 ZRSR1Q15695 479 aaKnown RBP25.85■■□□□ 1.73
FMR1-208ENST00000440235 SAMD9Q5K651 1589 aa25.85■■□□□ 1.73
FMR1-208ENST00000440235 FRAT2O75474 233 aaPredicted RBP25.83■■□□□ 1.73
FMR1-208ENST00000440235 KIF3BO15066 747 aa25.82■■□□□ 1.72
FMR1-208ENST00000440235 EFCAB2Q5VUJ9 269 aa25.82■■□□□ 1.72
FMR1-208ENST00000440235 SYNJ2O15056 1496 aa25.82■■□□□ 1.72
FMR1-208ENST00000440235 C11orf95C9JLR9 678 aaPredicted RBP25.82■■□□□ 1.72
FMR1-208ENST00000440235 NUTM2FA1L443 756 aa25.81■■□□□ 1.72
FMR1-208ENST00000440235 PMFBP1Q8TBY8 1022 aa25.81■■□□□ 1.72
FMR1-208ENST00000440235 GOLGA6L4A6NEF3 574 aa25.8■■□□□ 1.72
FMR1-208ENST00000440235 PANK1Q8TE04 598 aa25.8■■□□□ 1.72
FMR1-208ENST00000440235 ROCK1Q13464 1354 aa25.8■■□□□ 1.72
FMR1-208ENST00000440235 MAGI3Q5TCQ9 1506 aa25.8■■□□□ 1.72
FMR1-208ENST00000440235 CNTLNQ9NXG0 1405 aa25.8■■□□□ 1.72
FMR1-208ENST00000440235 IPO8O15397 1037 aaKnown RBP25.79■■□□□ 1.72
FMR1-208ENST00000440235 ANKRD30BQ9BXX2 1392 aa25.79■■□□□ 1.72
FMR1-208ENST00000440235 NUP153P49790 1475 aaKnown RBP25.79■■□□□ 1.72
FMR1-208ENST00000440235 TARBP1Q13395 1621 aaKnown RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms