RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 KDM5CP41229 1560 aa6.97□□□□□ -1.29
EDEM3-203ENST00000439962 SCAF1Q9H7N4 1312 aaKnown RBP6.96□□□□□ -1.29
EDEM3-203ENST00000439962 ZMYM4Q5VZL5 1548 aa6.96□□□□□ -1.3
EDEM3-203ENST00000439962 ANKRD30AQ9BXX3 1397 aa6.96□□□□□ -1.3
EDEM3-203ENST00000439962 FER1L4A9Z1Z3 1794 aa6.96□□□□□ -1.3
EDEM3-203ENST00000439962 MIA2Q96PC5 1412 aa6.95□□□□□ -1.3
EDEM3-203ENST00000439962 NUP155O75694 1391 aa6.94□□□□□ -1.3
EDEM3-203ENST00000439962 ADAMTSL3P82987 1691 aa6.93□□□□□ -1.3
EDEM3-203ENST00000439962 SRCAPQ6ZRS2 3230 aa6.93□□□□□ -1.3
EDEM3-203ENST00000439962 UHRF1BP1Q6BDS2 1440 aa6.93□□□□□ -1.3
EDEM3-203ENST00000439962 NCOA1Q15788 1441 aa6.93□□□□□ -1.3
EDEM3-203ENST00000439962 CLTCQ00610 1675 aaKnown RBP6.93□□□□□ -1.3
EDEM3-203ENST00000439962 ANKRD50Q9ULJ7 1429 aa6.92□□□□□ -1.3
EDEM3-203ENST00000439962 ZNF326Q5BKZ1 582 aaKnown RBP6.92□□□□□ -1.3
EDEM3-203ENST00000439962 LMTK3Q96Q04 1460 aa6.92□□□□□ -1.3
EDEM3-203ENST00000439962 RGL3Q3MIN7 710 aa6.92□□□□□ -1.3
EDEM3-203ENST00000439962 SLC26A8Q96RN1 970 aa6.92□□□□□ -1.3
EDEM3-203ENST00000439962 INO80Q9ULG1 1556 aaPredicted RBP6.92□□□□□ -1.3
EDEM3-203ENST00000439962 ILDR1Q86SU0 546 aaPredicted RBP6.91□□□□□ -1.3
EDEM3-203ENST00000439962 SLC4A1APQ9BWU0 796 aaKnown RBP6.91□□□□□ -1.3
EDEM3-203ENST00000439962 KANK1Q14678 1352 aa6.91□□□□□ -1.3
EDEM3-203ENST00000439962 PPP1R15AO75807 674 aaPredicted RBP6.91□□□□□ -1.3
EDEM3-203ENST00000439962 IDI1Q13907 227 aa6.91□□□□□ -1.3
EDEM3-203ENST00000439962 ZNF335Q9H4Z2 1342 aaPredicted RBP6.91□□□□□ -1.3
EDEM3-203ENST00000439962 RTEL1-TNFRSF6BF6WH68 1400 aa6.91□□□□□ -1.3
EDEM3-203ENST00000439962 TNRQ92752 1358 aa6.9□□□□□ -1.3
EDEM3-203ENST00000439962 PIP4K2BP78356 416 aa6.9□□□□□ -1.3
EDEM3-203ENST00000439962 ZNF316A6NFI3 1004 aaPredicted RBP6.9□□□□□ -1.31
EDEM3-203ENST00000439962 TXNDC2Q86VQ3 553 aa6.9□□□□□ -1.31
EDEM3-203ENST00000439962 DHX57Q6P158 1386 aaKnown RBP6.89□□□□□ -1.31
EDEM3-203ENST00000439962 PKD2Q13563 968 aa6.89□□□□□ -1.31
EDEM3-203ENST00000439962 C3P01024 1663 aa6.89□□□□□ -1.31
EDEM3-203ENST00000439962 ADGBQ8N7X0 1667 aa6.89□□□□□ -1.31
EDEM3-203ENST00000439962 ACIN1Q9UKV3 1341 aaKnown RBP6.88□□□□□ -1.31
EDEM3-203ENST00000439962 DNMT1P26358 1616 aaKnown RBP6.88□□□□□ -1.31
EDEM3-203ENST00000439962 ARHGEF5Q12774 1597 aa6.88□□□□□ -1.31
EDEM3-203ENST00000439962 LTKP29376 864 aa6.88□□□□□ -1.31
EDEM3-203ENST00000439962 ANKLE2Q86XL3 938 aa6.88□□□□□ -1.31
EDEM3-203ENST00000439962 THEMISQ8N1K5 641 aaPredicted RBP6.88□□□□□ -1.31
EDEM3-203ENST00000439962 SETD1BQ9UPS6 1966 aaKnown RBP6.87□□□□□ -1.31
EDEM3-203ENST00000439962 PPP6R1Q9UPN7 881 aa6.87□□□□□ -1.31
EDEM3-203ENST00000439962 DUOX2Q9NRD8 1548 aa6.87□□□□□ -1.31
EDEM3-203ENST00000439962 TCOF1Q13428 1488 aaKnown RBP6.87□□□□□ -1.31
EDEM3-203ENST00000439962 TIMELESSQ9UNS1 1208 aa6.87□□□□□ -1.31
EDEM3-203ENST00000439962 CNTLNQ9NXG0 1405 aa6.87□□□□□ -1.31
EDEM3-203ENST00000439962 DIEXFQ68CQ4 756 aaKnown RBP6.87□□□□□ -1.31
EDEM3-203ENST00000439962 NPATQ14207 1427 aa6.86□□□□□ -1.31
EDEM3-203ENST00000439962 PLXNC1O60486 1568 aa6.86□□□□□ -1.31
EDEM3-203ENST00000439962 CEP152O94986 1710 aa6.86□□□□□ -1.31
EDEM3-203ENST00000439962 AGLP35573 1532 aa6.86□□□□□ -1.31
EDEM3-203ENST00000439962 PLEKHG5O94827 1062 aa6.86□□□□□ -1.31
EDEM3-203ENST00000439962 C14orf37Q86TY3 774 aa6.86□□□□□ -1.31
EDEM3-203ENST00000439962 UGGT1Q9NYU2 1555 aa6.86□□□□□ -1.31
EDEM3-203ENST00000439962 KDM2AQ9Y2K7 1162 aa6.86□□□□□ -1.31
EDEM3-203ENST00000439962 EID1Q9Y6B2 187 aa6.86□□□□□ -1.31
EDEM3-203ENST00000439962 CAMSAP1Q5T5Y3 1602 aa6.85□□□□□ -1.31
EDEM3-203ENST00000439962 KDM5DQ9BY66 1539 aa6.85□□□□□ -1.31
EDEM3-203ENST00000439962 ABCC3O15438 1527 aa6.85□□□□□ -1.31
EDEM3-203ENST00000439962 SETD5Q9C0A6 1442 aa6.84□□□□□ -1.31
EDEM3-203ENST00000439962 UBAP1LF5GYI3 381 aa6.84□□□□□ -1.31
EDEM3-203ENST00000439962 CENPBP07199 599 aaPredicted RBP6.84□□□□□ -1.31
EDEM3-203ENST00000439962 ERBINQ96RT1 1412 aa6.84□□□□□ -1.31
EDEM3-203ENST00000439962 NEUROD1Q13562 356 aa6.84□□□□□ -1.31
EDEM3-203ENST00000439962 CERKQ8TCT0 537 aa6.84□□□□□ -1.31
EDEM3-203ENST00000439962 GCC2Q8IWJ2 1684 aa6.84□□□□□ -1.32
EDEM3-203ENST00000439962 DMRT2Q9Y5R5 561 aa6.83□□□□□ -1.32
EDEM3-203ENST00000439962 NAIPQ13075 1403 aa6.83□□□□□ -1.32
EDEM3-203ENST00000439962 NUTM2FA1L443 756 aa6.83□□□□□ -1.32
EDEM3-203ENST00000439962 MPHOSPH9Q99550 1183 aa6.83□□□□□ -1.32
EDEM3-203ENST00000439962 SHANK2Q9UPX8 1470 aa6.83□□□□□ -1.32
EDEM3-203ENST00000439962 CROCC2H7BZ55 1655 aa6.83□□□□□ -1.32
EDEM3-203ENST00000439962 STK26Q9P289 416 aa6.83□□□□□ -1.32
EDEM3-203ENST00000439962 PZPP20742 1482 aa6.82□□□□□ -1.32
EDEM3-203ENST00000439962 FAM135AQ9P2D6 1515 aa6.82□□□□□ -1.32
EDEM3-203ENST00000439962 SAFB2Q14151 953 aaKnown RBP eCLIP6.82□□□□□ -1.32
EDEM3-203ENST00000439962 ERVK-7P63135 1459 aa6.82□□□□□ -1.32
EDEM3-203ENST00000439962 RAB3GAP2Q9H2M9 1393 aa6.82□□□□□ -1.32
EDEM3-203ENST00000439962 REREQ9P2R6 1566 aa6.82□□□□□ -1.32
EDEM3-203ENST00000439962 PELP1Q8IZL8 1130 aaKnown RBP6.82□□□□□ -1.32
EDEM3-203ENST00000439962 CEP170BQ9Y4F5 1589 aaPredicted RBP6.81□□□□□ -1.32
EDEM3-203ENST00000439962 PREX1Q8TCU6 1659 aa6.81□□□□□ -1.32
EDEM3-203ENST00000439962 PRDM15P57071 1507 aaPredicted RBP6.81□□□□□ -1.32
EDEM3-203ENST00000439962 MROH1Q8NDA8 1641 aa6.81□□□□□ -1.32
EDEM3-203ENST00000439962 MAST1Q9Y2H9 1570 aa6.8□□□□□ -1.32
EDEM3-203ENST00000439962 MYO3AQ8NEV4 1616 aa6.8□□□□□ -1.32
EDEM3-203ENST00000439962 PROSER2Q86WR7 435 aaPredicted RBP6.8□□□□□ -1.32
EDEM3-203ENST00000439962 SLC52A1Q9NWF4 448 aa6.8□□□□□ -1.32
EDEM3-203ENST00000439962 ROCK1Q13464 1354 aa6.8□□□□□ -1.32
EDEM3-203ENST00000439962 ADGRL2O95490 1459 aa6.8□□□□□ -1.32
EDEM3-203ENST00000439962 TMEM132EQ6IEE7 984 aa6.79□□□□□ -1.32
EDEM3-203ENST00000439962 HFM1A2PYH4 1435 aa6.79□□□□□ -1.32
EDEM3-203ENST00000439962 A2ML1A8K2U0 1454 aa6.79□□□□□ -1.32
EDEM3-203ENST00000439962 STRCQ7RTU9 1775 aa6.79□□□□□ -1.32
EDEM3-203ENST00000439962 SIN3AQ96ST3 1273 aa6.79□□□□□ -1.32
EDEM3-203ENST00000439962 NPHP4O75161 1426 aaPredicted RBP6.78□□□□□ -1.32
EDEM3-203ENST00000439962 TMEM2Q9UHN6 1383 aa6.78□□□□□ -1.32
EDEM3-203ENST00000439962 KCNA6P17658 529 aa6.78□□□□□ -1.32
EDEM3-203ENST00000439962 DCAF11Q8TEB1 546 aa6.77□□□□□ -1.33
EDEM3-203ENST00000439962 FBXO41Q8TF61 875 aa6.77□□□□□ -1.33
EDEM3-203ENST00000439962 PIK3C2BO00750 1634 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms