RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 DNMT1P26358 1616 aaKnown RBP16.03■□□□□ 0.16
MCF2L-216ENST00000439475 DUOX2Q9NRD8 1548 aa16.03■□□□□ 0.16
MCF2L-216ENST00000439475 KIF15Q9NS87 1388 aa16.02■□□□□ 0.16
MCF2L-216ENST00000439475 NPATQ14207 1427 aa16.02■□□□□ 0.15
MCF2L-216ENST00000439475 PREX1Q8TCU6 1659 aa16.02■□□□□ 0.15
MCF2L-216ENST00000439475 FAM135AQ9P2D6 1515 aa16■□□□□ 0.15
MCF2L-216ENST00000439475 CROCC2H7BZ55 1655 aa16■□□□□ 0.15
MCF2L-216ENST00000439475 EIF2AK4Q9P2K8 1649 aaKnown RBP15.98■□□□□ 0.15
MCF2L-216ENST00000439475 NCOA1Q15788 1441 aa15.97■□□□□ 0.15
MCF2L-216ENST00000439475 ERBINQ96RT1 1412 aa15.97■□□□□ 0.15
MCF2L-216ENST00000439475 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
MCF2L-216ENST00000439475 KDM5DQ9BY66 1539 aa15.97■□□□□ 0.15
MCF2L-216ENST00000439475 KANK1Q14678 1352 aa15.96■□□□□ 0.15
MCF2L-216ENST00000439475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.96■□□□□ 0.151e-7■■□□□ 13.6
MCF2L-216ENST00000439475 PTPRKQ15262 1439 aa15.95■□□□□ 0.14
MCF2L-216ENST00000439475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.149e-7■■□□□ 14.1
MCF2L-216ENST00000439475 ITGAEP38570 1179 aa15.94■□□□□ 0.14
MCF2L-216ENST00000439475 RNF17Q9BXT8 1623 aaKnown RBP15.94■□□□□ 0.14
MCF2L-216ENST00000439475 ADGRL2O95490 1459 aa15.93■□□□□ 0.14
MCF2L-216ENST00000439475 FBXO31Q5XUX0 539 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-216ENST00000439475 PZPP20742 1482 aa15.91■□□□□ 0.14
MCF2L-216ENST00000439475 ZC3H13Q5T200 1668 aaKnown RBP15.91■□□□□ 0.14
MCF2L-216ENST00000439475 TNRQ92752 1358 aa15.9■□□□□ 0.14
MCF2L-216ENST00000439475 ROCK1Q13464 1354 aa15.89■□□□□ 0.13
MCF2L-216ENST00000439475 ANKRD50Q9ULJ7 1429 aa15.89■□□□□ 0.13
MCF2L-216ENST00000439475 ABCC3O15438 1527 aa15.89■□□□□ 0.13
MCF2L-216ENST00000439475 RRBP1Q9P2E9 1410 aaKnown RBP15.86■□□□□ 0.13
MCF2L-216ENST00000439475 PKD2Q13563 968 aa15.86■□□□□ 0.13
MCF2L-216ENST00000439475 THEMISQ8N1K5 641 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-216ENST00000439475 A2ML1A8K2U0 1454 aa15.85■□□□□ 0.13
MCF2L-216ENST00000439475 PRDM15P57071 1507 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-216ENST00000439475 CFAP65Q6ZU64 1925 aaKnown RBP15.85■□□□□ 0.13
MCF2L-216ENST00000439475 MROH1Q8NDA8 1641 aa15.85■□□□□ 0.13
MCF2L-216ENST00000439475 MYO3AQ8NEV4 1616 aa15.85■□□□□ 0.13
MCF2L-216ENST00000439475 CEP152O94986 1710 aa15.85■□□□□ 0.13
MCF2L-216ENST00000439475 ARHGAP31Q2M1Z3 1444 aa15.85■□□□□ 0.13
MCF2L-216ENST00000439475 CEP170BQ9Y4F5 1589 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-216ENST00000439475 NLRP1Q9C000 1473 aa15.84■□□□□ 0.13
MCF2L-216ENST00000439475 DEPDC5O75140 1603 aa15.83■□□□□ 0.13
MCF2L-216ENST00000439475 CAMSAP1Q5T5Y3 1602 aa15.83■□□□□ 0.13
MCF2L-216ENST00000439475 PTPRTO14522 1441 aa15.83■□□□□ 0.12
MCF2L-216ENST00000439475 ZNF142P52746 1687 aaPredicted RBP15.82■□□□□ 0.12
MCF2L-216ENST00000439475 STRCQ7RTU9 1775 aa15.82■□□□□ 0.12
MCF2L-216ENST00000439475 ERVK-7P63135 1459 aa15.81■□□□□ 0.12
MCF2L-216ENST00000439475 PLA2R1Q13018 1463 aa15.81■□□□□ 0.12
MCF2L-216ENST00000439475 NCKAP5LQ9HCH0 1330 aa15.81■□□□□ 0.12
MCF2L-216ENST00000439475 SPATA31D1Q6ZQQ2 1576 aa15.8■□□□□ 0.12
MCF2L-216ENST00000439475 LMTK2Q8IWU2 1503 aa15.8■□□□□ 0.12
MCF2L-216ENST00000439475 ANKLE2Q86XL3 938 aa15.8■□□□□ 0.12
MCF2L-216ENST00000439475 STAG3Q9UJ98 1225 aa15.8■□□□□ 0.12
MCF2L-216ENST00000439475 UGGT1Q9NYU2 1555 aa15.78■□□□□ 0.12
MCF2L-216ENST00000439475 VWDEQ8N2E2 1590 aa15.77■□□□□ 0.11
MCF2L-216ENST00000439475 SLC52A1Q9NWF4 448 aa15.76■□□□□ 0.11
MCF2L-216ENST00000439475 NUP155O75694 1391 aa15.75■□□□□ 0.11
MCF2L-216ENST00000439475 CERKQ8TCT0 537 aa15.75■□□□□ 0.11
MCF2L-216ENST00000439475 RPRD2Q5VT52 1461 aaKnown RBP15.73■□□□□ 0.11
MCF2L-216ENST00000439475 UNC13BO14795 1591 aa15.72■□□□□ 0.11
MCF2L-216ENST00000439475 IDI1Q13907 227 aa15.72■□□□□ 0.11
MCF2L-216ENST00000439475 ILDR1Q86SU0 546 aaPredicted RBP15.72■□□□□ 0.11
MCF2L-216ENST00000439475 FBXO41Q8TF61 875 aa15.72■□□□□ 0.11
MCF2L-216ENST00000439475 EID1Q9Y6B2 187 aa15.72■□□□□ 0.11
MCF2L-216ENST00000439475 EFCAB6Q5THR3 1501 aa15.72■□□□□ 0.11
MCF2L-216ENST00000439475 TET3O43151 1660 aa15.71■□□□□ 0.11
MCF2L-216ENST00000439475 NOS1P29475 1434 aa15.7■□□□□ 0.1
MCF2L-216ENST00000439475 HDGFP51858 240 aaKnown RBP15.7■□□□□ 0.1
MCF2L-216ENST00000439475 TXNDC2Q86VQ3 553 aa15.7■□□□□ 0.1
MCF2L-216ENST00000439475 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
MCF2L-216ENST00000439475 NAIPQ13075 1403 aa15.69■□□□□ 0.1
MCF2L-216ENST00000439475 GCC2Q8IWJ2 1684 aa15.69■□□□□ 0.1
MCF2L-216ENST00000439475 POLR1AO95602 1720 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-216ENST00000439475 IQGAP3Q86VI3 1631 aa15.68■□□□□ 0.1
MCF2L-216ENST00000439475 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
MCF2L-216ENST00000439475 UBR1Q8IWV7 1749 aa15.67■□□□□ 0.1
MCF2L-216ENST00000439475 HFM1A2PYH4 1435 aa15.67■□□□□ 0.1
MCF2L-216ENST00000439475 NPHP4O75161 1426 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-216ENST00000439475 CHGAP10645 457 aaKnown RBP15.66■□□□□ 0.1
MCF2L-216ENST00000439475 MED14O60244 1454 aa15.65■□□□□ 0.1
MCF2L-216ENST00000439475 PIK3C2BO00750 1634 aa15.65■□□□□ 0.1
MCF2L-216ENST00000439475 ZNF335Q9H4Z2 1342 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-216ENST00000439475 KDM5AP29375 1690 aaKnown RBP15.63■□□□□ 0.09
MCF2L-216ENST00000439475 TMEM2Q9UHN6 1383 aa15.63■□□□□ 0.09
MCF2L-216ENST00000439475 SYNMO15061 1565 aa15.63■□□□□ 0.09
MCF2L-216ENST00000439475 SCAF11Q99590 1463 aaKnown RBP15.63■□□□□ 0.09
MCF2L-216ENST00000439475 SLIT1O75093 1534 aa15.63■□□□□ 0.09
MCF2L-216ENST00000439475 LTKP29376 864 aa15.62■□□□□ 0.09
MCF2L-216ENST00000439475 ARHGAP23Q9P227 1491 aa15.62■□□□□ 0.09
MCF2L-216ENST00000439475 E9PCH4 1651 aa15.62■□□□□ 0.09
MCF2L-216ENST00000439475 NEURL4Q96JN8 1562 aa15.62■□□□□ 0.09
MCF2L-216ENST00000439475 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.61■□□□□ 0.09
MCF2L-216ENST00000439475 BCANQ96GW7 911 aa15.61■□□□□ 0.09
MCF2L-216ENST00000439475 SLC4A1APQ9BWU0 796 aaKnown RBP15.61■□□□□ 0.09
MCF2L-216ENST00000439475 LTBP4Q8N2S1 1624 aa15.61■□□□□ 0.09
MCF2L-216ENST00000439475 IQSEC2Q5JU85 1478 aa15.59■□□□□ 0.09
MCF2L-216ENST00000439475 ADGRB3O60242 1522 aa15.59■□□□□ 0.09
MCF2L-216ENST00000439475 PPP1R15AO75807 674 aaPredicted RBP15.59■□□□□ 0.09
MCF2L-216ENST00000439475 IQGAP1P46940 1657 aa15.59■□□□□ 0.09
MCF2L-216ENST00000439475 CPS1P31327 1500 aa15.56■□□□□ 0.08
MCF2L-216ENST00000439475 SETD5Q9C0A6 1442 aa15.55■□□□□ 0.08
MCF2L-216ENST00000439475 RIMS2Q9UQ26 1411 aa15.54■□□□□ 0.08
MCF2L-216ENST00000439475 ZNF326Q5BKZ1 582 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms