RNA–Protein interactions for RNA: ENST00000438345.1

SDR42E1P3-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1 pseudogene 3, humanhuman

BASIC

Gene SDR42E1P3, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1P3-201ENST00000438345 HRO43593 1189 aa15.57■□□□□ 0.08
SDR42E1P3-201ENST00000438345 VPS9D1Q9Y2B5 631 aa15.56■□□□□ 0.08
SDR42E1P3-201ENST00000438345 EPAS1Q99814 870 aa15.55■□□□□ 0.08
SDR42E1P3-201ENST00000438345 SLC4A5Q9BY07 1137 aa15.54■□□□□ 0.08
SDR42E1P3-201ENST00000438345 ZBED2Q9BTP6 218 aa15.52■□□□□ 0.08
SDR42E1P3-201ENST00000438345 ARHGEF1Q92888 912 aaKnown RBP15.5■□□□□ 0.07
SDR42E1P3-201ENST00000438345 PPP1R3GB7ZBB8 358 aa15.49■□□□□ 0.07
SDR42E1P3-201ENST00000438345 GRXCR2A6NFK2 248 aa15.48■□□□□ 0.07
SDR42E1P3-201ENST00000438345 COL9A1P20849 921 aa15.47■□□□□ 0.07
SDR42E1P3-201ENST00000438345 RBM33Q96EV2 1170 aaKnown RBP15.47■□□□□ 0.07
SDR42E1P3-201ENST00000438345 NBR1Q14596 966 aa15.46■□□□□ 0.07
SDR42E1P3-201ENST00000438345 C6orf132Q5T0Z8 1188 aa15.46■□□□□ 0.07
SDR42E1P3-201ENST00000438345 VSIG10Q8N0Z9 540 aa15.46■□□□□ 0.07
SDR42E1P3-201ENST00000438345 STAC3Q96MF2 364 aa15.46■□□□□ 0.07
SDR42E1P3-201ENST00000438345 PRIM1P49642 420 aaKnown RBP15.45■□□□□ 0.06
SDR42E1P3-201ENST00000438345 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
SDR42E1P3-201ENST00000438345 BHMG1C9JSJ3 638 aaPredicted RBP15.42■□□□□ 0.06
SDR42E1P3-201ENST00000438345 MLLT3P42568 568 aaPredicted RBP15.42■□□□□ 0.06
SDR42E1P3-201ENST00000438345 EN1Q05925 392 aaPredicted RBP15.42■□□□□ 0.06
SDR42E1P3-201ENST00000438345 PROX2Q3B8N5 592 aa15.4■□□□□ 0.06
SDR42E1P3-201ENST00000438345 MAP3K7O43318 606 aa15.38■□□□□ 0.05
SDR42E1P3-201ENST00000438345 OSBPP22059 807 aa15.38■□□□□ 0.05
SDR42E1P3-201ENST00000438345 TSR1Q2NL82 804 aaKnown RBP15.38■□□□□ 0.05
SDR42E1P3-201ENST00000438345 SEMA3EO15041 775 aa15.37■□□□□ 0.05
SDR42E1P3-201ENST00000438345 KCTD12Q96CX2 325 aaKnown RBP15.36■□□□□ 0.05
SDR42E1P3-201ENST00000438345 NBPF3Q9H094 633 aa15.35■□□□□ 0.05
SDR42E1P3-201ENST00000438345 RABGEF1Q9UJ41 708 aa15.35■□□□□ 0.05
SDR42E1P3-201ENST00000438345 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
SDR42E1P3-201ENST00000438345 HCSTQ9UBK5 93 aa15.33■□□□□ 0.04
SDR42E1P3-201ENST00000438345 ONECUT3O60422 494 aaPredicted RBP15.29■□□□□ 0.04
SDR42E1P3-201ENST00000438345 CDHR5Q9HBB8 845 aa15.29■□□□□ 0.04
SDR42E1P3-201ENST00000438345 KIAA1468Q9P260 1216 aa15.29■□□□□ 0.04
SDR42E1P3-201ENST00000438345 GOLGA8CPA6NN73 597 aa15.28■□□□□ 0.04
SDR42E1P3-201ENST00000438345 TRIM6-TRIM34B2RNG4 842 aa15.28■□□□□ 0.04
SDR42E1P3-201ENST00000438345 WNT2BQ93097 391 aa15.25■□□□□ 0.03
SDR42E1P3-201ENST00000438345 THSD4Q6ZMP0 1018 aa15.22■□□□□ 0.03
SDR42E1P3-201ENST00000438345 LAPTM4BQ86VI4 370 aa15.22■□□□□ 0.03
SDR42E1P3-201ENST00000438345 CERKQ8TCT0 537 aa15.22■□□□□ 0.03
SDR42E1P3-201ENST00000438345 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
SDR42E1P3-201ENST00000438345 TESPA1A2RU30 521 aaPredicted RBP15.21■□□□□ 0.03
SDR42E1P3-201ENST00000438345 CDCA7LQ96GN5 454 aa15.2■□□□□ 0.02
SDR42E1P3-201ENST00000438345 SEPT9Q9UHD8 586 aaPredicted RBP15.2■□□□□ 0.02
SDR42E1P3-201ENST00000438345 PTPN5P54829 565 aa15.19■□□□□ 0.02
SDR42E1P3-201ENST00000438345 PRSS12P56730 875 aa15.19■□□□□ 0.02
SDR42E1P3-201ENST00000438345 PACS2Q86VP3 889 aa15.18■□□□□ 0.02
SDR42E1P3-201ENST00000438345 NPDC1Q9NQX5 325 aaPredicted RBP15.18■□□□□ 0.02
SDR42E1P3-201ENST00000438345 ANKK1Q8NFD2 765 aa15.16■□□□□ 0.02
SDR42E1P3-201ENST00000438345 FAM198AQ9UFP1 575 aa15.16■□□□□ 0.02
SDR42E1P3-201ENST00000438345 ZFRQ96KR1 1074 aaKnown RBP15.15■□□□□ 0.02
SDR42E1P3-201ENST00000438345 FAM98CQ17RN3 349 aaKnown RBP15.14■□□□□ 0.01
SDR42E1P3-201ENST00000438345 RBM26Q5T8P6 1007 aaKnown RBP15.13■□□□□ 0.01
SDR42E1P3-201ENST00000438345 NUTM2FA1L443 756 aa15.11■□□□□ 0.01
SDR42E1P3-201ENST00000438345 C3orf80F5H4A9 247 aa15.11■□□□□ 0.01
SDR42E1P3-201ENST00000438345 RBM27Q9P2N5 1060 aaKnown RBP15.11■□□□□ 0.01
SDR42E1P3-201ENST00000438345 BCAMP50895 628 aa15.1■□□□□ 0.01
SDR42E1P3-201ENST00000438345 PLA2G2EQ9NZK7 142 aa15.1■□□□□ 0.01
SDR42E1P3-201ENST00000438345 SOWAHBA6NEL2 793 aa15.08■□□□□ 0
SDR42E1P3-201ENST00000438345 SMAPO00193 183 aa15.08■□□□□ 0
SDR42E1P3-201ENST00000438345 NBPF26B4DH59 902 aa15.06■□□□□ 0
SDR42E1P3-201ENST00000438345 PTGDRQ13258 359 aa15.06■□□□□ 0
SDR42E1P3-201ENST00000438345 PADI6Q6TGC4 694 aa15.06■□□□□ 0
SDR42E1P3-201ENST00000438345 TTC13Q8NBP0 860 aa15.06■□□□□ 0
SDR42E1P3-201ENST00000438345 TATDN2Q93075 761 aa15.06■□□□□ 0
SDR42E1P3-201ENST00000438345 SMYD5Q6GMV2 418 aa15.05■□□□□ -0
SDR42E1P3-201ENST00000438345 PNMA3Q9UL41 463 aa15.04■□□□□ -0
SDR42E1P3-201ENST00000438345 LRCH3Q96II8 777 aa15.02■□□□□ -0
SDR42E1P3-201ENST00000438345 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.02■□□□□ -0
SDR42E1P3-201ENST00000438345 NUDT18Q6ZVK8 323 aa15.01□□□□□ -0.01
SDR42E1P3-201ENST00000438345 WBP1LQ9NX94 342 aa14.98□□□□□ -0.01
SDR42E1P3-201ENST00000438345 SAMD7Q7Z3H4 446 aa14.97□□□□□ -0.01
SDR42E1P3-201ENST00000438345 HPS5Q9UPZ3 1129 aa14.97□□□□□ -0.01
SDR42E1P3-201ENST00000438345 FCHSD2O94868 740 aa14.96□□□□□ -0.01
SDR42E1P3-201ENST00000438345 TSR3Q9UJK0 312 aaKnown RBP14.96□□□□□ -0.01
SDR42E1P3-201ENST00000438345 GPR37O15354 613 aa14.95□□□□□ -0.02
SDR42E1P3-201ENST00000438345 SLC24A1O60721 1099 aa14.95□□□□□ -0.02
SDR42E1P3-201ENST00000438345 FAM161AQ3B820 660 aa14.95□□□□□ -0.02
SDR42E1P3-201ENST00000438345 NYAP1Q6ZVC0 841 aa14.94□□□□□ -0.02
SDR42E1P3-201ENST00000438345 FECHP22830 423 aa14.93□□□□□ -0.02
SDR42E1P3-201ENST00000438345 EYA1Q99502 592 aa14.9□□□□□ -0.02
SDR42E1P3-201ENST00000438345 GPIHBP1Q8IV16 184 aa14.89□□□□□ -0.03
SDR42E1P3-201ENST00000438345 PPP4CP60510 307 aa14.88□□□□□ -0.03
SDR42E1P3-201ENST00000438345 HIC1Q14526 733 aa14.88□□□□□ -0.03
SDR42E1P3-201ENST00000438345 IFFO2Q5TF58 517 aa14.88□□□□□ -0.03
SDR42E1P3-201ENST00000438345 HDGFP51858 240 aaKnown RBP14.87□□□□□ -0.03
SDR42E1P3-201ENST00000438345 ADGRG1Q9Y653 693 aa14.87□□□□□ -0.03
SDR42E1P3-201ENST00000438345 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.86□□□□□ -0.03
SDR42E1P3-201ENST00000438345 GNPATO15228 680 aa14.85□□□□□ -0.03
SDR42E1P3-201ENST00000438345 ITGBL1O95965 494 aaPredicted RBP14.85□□□□□ -0.03
SDR42E1P3-201ENST00000438345 SWT1Q5T5J6 900 aaKnown RBP14.84□□□□□ -0.03
SDR42E1P3-201ENST00000438345 TULP1O00294 542 aaPredicted RBP14.83□□□□□ -0.04
SDR42E1P3-201ENST00000438345 RNF40O75150 1001 aa14.82□□□□□ -0.04
SDR42E1P3-201ENST00000438345 RBM46Q8TBY0 533 aaKnown RBP14.82□□□□□ -0.04
SDR42E1P3-201ENST00000438345 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
SDR42E1P3-201ENST00000438345 DNAJB2P25686 324 aa14.78□□□□□ -0.04
SDR42E1P3-201ENST00000438345 SLF2Q8IX21 1173 aa14.78□□□□□ -0.04
SDR42E1P3-201ENST00000438345 A0A0G2JS52 829 aa14.75□□□□□ -0.05
SDR42E1P3-201ENST00000438345 RCCD1A6NED2 376 aa14.75□□□□□ -0.05
SDR42E1P3-201ENST00000438345 PXYLP1Q8TE99 480 aa14.75□□□□□ -0.05
SDR42E1P3-201ENST00000438345 TMEM134Q9H6X4 195 aa14.75□□□□□ -0.05
SDR42E1P3-201ENST00000438345 KCNC4Q03721 635 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms