RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 ACIN1Q9UKV3 1341 aaKnown RBP21.98■■□□□ 1.11
SKA2-202ENST00000437036 KANK1Q14678 1352 aa21.98■■□□□ 1.11
SKA2-202ENST00000437036 GCC2Q8IWJ2 1684 aa21.98■■□□□ 1.11
SKA2-202ENST00000437036 WASHC2CQ9Y4E1 1318 aa21.95■■□□□ 1.1
SKA2-202ENST00000437036 RNF17Q9BXT8 1623 aaKnown RBP21.95■■□□□ 1.1
SKA2-202ENST00000437036 CNTLNQ9NXG0 1405 aa21.93■■□□□ 1.1
SKA2-202ENST00000437036 FAM135AQ9P2D6 1515 aa21.91■■□□□ 1.1
SKA2-202ENST00000437036 TRIM52Q96A61 297 aa21.91■■□□□ 1.1
SKA2-202ENST00000437036 ADAMTSL3P82987 1691 aa21.91■■□□□ 1.1
SKA2-202ENST00000437036 KDM4FA0A1W2PPD8 638 aa21.9■■□□□ 1.1
SKA2-202ENST00000437036 DEPDC5O75140 1603 aa21.9■■□□□ 1.1
SKA2-202ENST00000437036 NUP155O75694 1391 aa21.89■■□□□ 1.1
SKA2-202ENST00000437036 RAB3GAP2Q9H2M9 1393 aa21.89■■□□□ 1.1
SKA2-202ENST00000437036 HRCP23327 699 aa21.89■■□□□ 1.09
SKA2-202ENST00000437036 PRDM15P57071 1507 aaPredicted RBP21.89■■□□□ 1.09
SKA2-202ENST00000437036 PCGF6Q9BYE7 350 aa21.88■■□□□ 1.09
SKA2-202ENST00000437036 KDM5DQ9BY66 1539 aa21.88■■□□□ 1.09
SKA2-202ENST00000437036 MADDQ8WXG6 1647 aa21.88■■□□□ 1.09
SKA2-202ENST00000437036 UNC13BO14795 1591 aa21.87■■□□□ 1.09
SKA2-202ENST00000437036 MROH1Q8NDA8 1641 aa21.87■■□□□ 1.09
SKA2-202ENST00000437036 FER1L4A9Z1Z3 1794 aa21.87■■□□□ 1.09
SKA2-202ENST00000437036 ABCC3O15438 1527 aa21.84■■□□□ 1.09
SKA2-202ENST00000437036 ZC3H13Q5T200 1668 aaKnown RBP21.83■■□□□ 1.09
SKA2-202ENST00000437036 ZMYM3Q14202 1370 aa21.83■■□□□ 1.08
SKA2-202ENST00000437036 VWDEQ8N2E2 1590 aa21.82■■□□□ 1.08
SKA2-202ENST00000437036 CLTCQ00610 1675 aaKnown RBP21.82■■□□□ 1.08
SKA2-202ENST00000437036 RIMS1Q86UR5 1692 aaKnown RBP21.82■■□□□ 1.08
SKA2-202ENST00000437036 LMTK2Q8IWU2 1503 aa21.8■■□□□ 1.08
SKA2-202ENST00000437036 PTPRMP28827 1452 aa21.8■■□□□ 1.08
SKA2-202ENST00000437036 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
SKA2-202ENST00000437036 SLC4A1APQ9BWU0 796 aaKnown RBP21.79■■□□□ 1.08
SKA2-202ENST00000437036 IQGAP3Q86VI3 1631 aa21.79■■□□□ 1.08
SKA2-202ENST00000437036 MROH2AA6NES4 1674 aa21.79■■□□□ 1.08
SKA2-202ENST00000437036 CEBPAP49715 358 aaPredicted RBP21.77■■□□□ 1.08
SKA2-202ENST00000437036 CEP152O94986 1710 aa21.77■■□□□ 1.08
SKA2-202ENST00000437036 ARHGAP31Q2M1Z3 1444 aa21.76■■□□□ 1.07
SKA2-202ENST00000437036 PZPP20742 1482 aa21.75■■□□□ 1.07
SKA2-202ENST00000437036 CAMSAP1Q5T5Y3 1602 aa21.74■■□□□ 1.07
SKA2-202ENST00000437036 MPHOSPH9Q99550 1183 aa21.74■■□□□ 1.07
SKA2-202ENST00000437036 TET3O43151 1660 aa21.73■■□□□ 1.07
SKA2-202ENST00000437036 EFCAB6Q5THR3 1501 aa21.73■■□□□ 1.07
SKA2-202ENST00000437036 PKD2Q13563 968 aa21.72■■□□□ 1.07
SKA2-202ENST00000437036 NPATQ14207 1427 aa21.72■■□□□ 1.07
SKA2-202ENST00000437036 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
SKA2-202ENST00000437036 C3P01024 1663 aa21.71■■□□□ 1.07
SKA2-202ENST00000437036 FBXO31Q5XUX0 539 aaPredicted RBP21.7■■□□□ 1.06
SKA2-202ENST00000437036 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
SKA2-202ENST00000437036 ERVK-7P63135 1459 aa21.66■■□□□ 1.06
SKA2-202ENST00000437036 TNRQ92752 1358 aa21.66■■□□□ 1.06
SKA2-202ENST00000437036 E9PCH4 1651 aa21.63■■□□□ 1.05
SKA2-202ENST00000437036 SPATA31D1Q6ZQQ2 1576 aa21.62■■□□□ 1.05
SKA2-202ENST00000437036 NOS1P29475 1434 aa21.62■■□□□ 1.05
SKA2-202ENST00000437036 FOXD1Q16676 465 aa21.61■■□□□ 1.05
SKA2-202ENST00000437036 SLC52A1Q9NWF4 448 aa21.61■■□□□ 1.05
SKA2-202ENST00000437036 SETD1BQ9UPS6 1966 aaKnown RBP21.61■■□□□ 1.05
SKA2-202ENST00000437036 PREX1Q8TCU6 1659 aa21.6■■□□□ 1.05
SKA2-202ENST00000437036 CFAP65Q6ZU64 1925 aaKnown RBP21.6■■□□□ 1.05
SKA2-202ENST00000437036 PTPRTO14522 1441 aa21.58■■□□□ 1.05
SKA2-202ENST00000437036 UHRF1BP1Q6BDS2 1440 aa21.58■■□□□ 1.05
SKA2-202ENST00000437036 NLRP1Q9C000 1473 aa21.57■■□□□ 1.04
SKA2-202ENST00000437036 IDI1Q13907 227 aa21.54■■□□□ 1.04
SKA2-202ENST00000437036 STAG3Q9UJ98 1225 aa21.54■■□□□ 1.04
SKA2-202ENST00000437036 DHX57Q6P158 1386 aaKnown RBP21.53■■□□□ 1.04
SKA2-202ENST00000437036 SPHKAPQ2M3C7 1700 aa21.53■■□□□ 1.04
SKA2-202ENST00000437036 SYNMO15061 1565 aa21.53■■□□□ 1.04
SKA2-202ENST00000437036 TRPM2O94759 1503 aa21.52■■□□□ 1.04
SKA2-202ENST00000437036 PLA2R1Q13018 1463 aa21.52■■□□□ 1.03
SKA2-202ENST00000437036 CCDC144AA2RUR9 1427 aa21.51■■□□□ 1.03
SKA2-202ENST00000437036 A2ML1A8K2U0 1454 aa21.51■■□□□ 1.03
SKA2-202ENST00000437036 MYO3AQ8NEV4 1616 aa21.51■■□□□ 1.03
SKA2-202ENST00000437036 ANKRD30BQ9BXX2 1392 aa21.49■■□□□ 1.03
SKA2-202ENST00000437036 CHGAP10645 457 aaKnown RBP21.49■■□□□ 1.03
SKA2-202ENST00000437036 THEMISQ8N1K5 641 aaPredicted RBP21.49■■□□□ 1.03
SKA2-202ENST00000437036 CEP170BQ9Y4F5 1589 aaPredicted RBP21.48■■□□□ 1.03
SKA2-202ENST00000437036 UGGT1Q9NYU2 1555 aa21.45■■□□□ 1.02
SKA2-202ENST00000437036 PIK3C2BO00750 1634 aa21.45■■□□□ 1.02
SKA2-202ENST00000437036 LMTK3Q96Q04 1460 aa21.44■■□□□ 1.02
SKA2-202ENST00000437036 ZNF142P52746 1687 aaPredicted RBP21.44■■□□□ 1.02
SKA2-202ENST00000437036 CLTCL1P53675 1640 aa21.43■■□□□ 1.02
SKA2-202ENST00000437036 ADGRB3O60242 1522 aa21.42■■□□□ 1.02
SKA2-202ENST00000437036 CCER1Q8TC90 406 aaPredicted RBP21.42■■□□□ 1.02
SKA2-202ENST00000437036 ZNF326Q5BKZ1 582 aaKnown RBP21.41■■□□□ 1.02
SKA2-202ENST00000437036 HDGFP51858 240 aaKnown RBP21.4■■□□□ 1.02
SKA2-202ENST00000437036 HSPA2P54652 639 aa21.4■■□□□ 1.02
SKA2-202ENST00000437036 KDM5AP29375 1690 aaKnown RBP21.39■■□□□ 1.01
SKA2-202ENST00000437036 CLSPNQ9HAW4 1339 aa21.38■■□□□ 1.01
SKA2-202ENST00000437036 EID1Q9Y6B2 187 aa21.38■■□□□ 1.01
SKA2-202ENST00000437036 UBR1Q8IWV7 1749 aa21.38■■□□□ 1.01
SKA2-202ENST00000437036 TMEM131LA2VDJ0 1609 aa21.37■■□□□ 1.01
SKA2-202ENST00000437036 KIF1BO60333 1816 aa21.36■■□□□ 1.01
SKA2-202ENST00000437036 RGL3Q3MIN7 710 aa21.36■■□□□ 1.01
SKA2-202ENST00000437036 ANKLE2Q86XL3 938 aa21.36■■□□□ 1.01
SKA2-202ENST00000437036 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.36■■□□□ 1.01
SKA2-202ENST00000437036 TMEM2Q9UHN6 1383 aa21.36■■□□□ 1.01
SKA2-202ENST00000437036 NEUROD1Q13562 356 aa21.35■■□□□ 1.01
SKA2-202ENST00000437036 RPGRIP1LQ68CZ1 1315 aa21.34■■□□□ 1.01
SKA2-202ENST00000437036 SIN3AQ96ST3 1273 aa21.34■■□□□ 1.01
SKA2-202ENST00000437036 SPATA31E1Q6ZUB1 1445 aa21.33■■□□□ 1.01
SKA2-202ENST00000437036 TXNDC2Q86VQ3 553 aa21.33■■□□□ 1.01
SKA2-202ENST00000437036 PPP1R15AO75807 674 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms