RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 NUP155O75694 1391 aa31.49■■■□□ 2.63
YBX1-203ENST00000436427 REREQ9P2R6 1566 aa31.46■■■□□ 2.63
YBX1-203ENST00000436427 DEPDC5O75140 1603 aa31.45■■■□□ 2.62
YBX1-203ENST00000436427 KDM5DQ9BY66 1539 aa31.44■■■□□ 2.62
YBX1-203ENST00000436427 BCORL1Q5H9F3 1711 aa31.43■■■□□ 2.62
YBX1-203ENST00000436427 MPHOSPH9Q99550 1183 aa31.43■■■□□ 2.62
YBX1-203ENST00000436427 PZPP20742 1482 aa31.42■■■□□ 2.62
YBX1-203ENST00000436427 SLC4A1APQ9BWU0 796 aaKnown RBP31.42■■■□□ 2.62
YBX1-203ENST00000436427 RNF17Q9BXT8 1623 aaKnown RBP31.41■■■□□ 2.62
YBX1-203ENST00000436427 PRDM15P57071 1507 aaPredicted RBP31.39■■■□□ 2.61
YBX1-203ENST00000436427 FAM135AQ9P2D6 1515 aa31.39■■■□□ 2.61
YBX1-203ENST00000436427 MROH1Q8NDA8 1641 aa31.38■■■□□ 2.61
YBX1-203ENST00000436427 GGT6Q6P531 493 aa31.38■■■□□ 2.61
YBX1-203ENST00000436427 IQGAP3Q86VI3 1631 aa31.38■■■□□ 2.61
YBX1-203ENST00000436427 KANK1Q14678 1352 aa31.37■■■□□ 2.61
YBX1-203ENST00000436427 AGLP35573 1532 aa31.36■■■□□ 2.61
YBX1-203ENST00000436427 SIGLEC1Q9BZZ2 1709 aa31.36■■■□□ 2.61
YBX1-203ENST00000436427 ARID4BQ4LE39 1312 aaPredicted RBP31.3■■■□□ 2.6
YBX1-203ENST00000436427 VWDEQ8N2E2 1590 aa31.3■■■□□ 2.6
YBX1-203ENST00000436427 PKD2Q13563 968 aa31.29■■■□□ 2.6
YBX1-203ENST00000436427 FOXD1Q16676 465 aa31.29■■■□□ 2.6
YBX1-203ENST00000436427 CLSPNQ9HAW4 1339 aa31.28■■■□□ 2.6
YBX1-203ENST00000436427 CEP152O94986 1710 aa31.24■■■□□ 2.59
YBX1-203ENST00000436427 MLECQ14165 292 aa31.24■■■□□ 2.59
YBX1-203ENST00000436427 WASHC2CQ9Y4E1 1318 aa31.24■■■□□ 2.59
YBX1-203ENST00000436427 TET3O43151 1660 aa31.22■■■□□ 2.59
YBX1-203ENST00000436427 ABCC3O15438 1527 aa31.2■■■□□ 2.59
YBX1-203ENST00000436427 LMTK2Q8IWU2 1503 aa31.2■■■□□ 2.59
YBX1-203ENST00000436427 ZC3H13Q5T200 1668 aaKnown RBP31.18■■■□□ 2.58
YBX1-203ENST00000436427 E9PCH4 1651 aa31.16■■■□□ 2.58
YBX1-203ENST00000436427 EFCAB6Q5THR3 1501 aa31.15■■■□□ 2.58
YBX1-203ENST00000436427 PPP6R1Q9UPN7 881 aa31.14■■■□□ 2.58
YBX1-203ENST00000436427 ANKRD30BQ9BXX2 1392 aa31.13■■■□□ 2.57
YBX1-203ENST00000436427 CAMSAP1Q5T5Y3 1602 aa31.13■■■□□ 2.57
YBX1-203ENST00000436427 SIN3AQ96ST3 1273 aa31.13■■■□□ 2.57
YBX1-203ENST00000436427 NEUROD1Q13562 356 aa31.1■■■□□ 2.57
YBX1-203ENST00000436427 ESF1Q9H501 851 aaKnown RBP31.1■■■□□ 2.57
YBX1-203ENST00000436427 CLTCQ00610 1675 aaKnown RBP31.09■■■□□ 2.57
YBX1-203ENST00000436427 ZEB1P37275 1124 aaPredicted RBP31.08■■■□□ 2.57
YBX1-203ENST00000436427 NPATQ14207 1427 aa31.05■■■□□ 2.56
YBX1-203ENST00000436427 RPRD2Q5VT52 1461 aaKnown RBP31.05■■■□□ 2.56
YBX1-203ENST00000436427 SPHKAPQ2M3C7 1700 aa31.02■■■□□ 2.56
YBX1-203ENST00000436427 ARHGAP31Q2M1Z3 1444 aa31.01■■■□□ 2.56
YBX1-203ENST00000436427 PLA2R1Q13018 1463 aa31.01■■■□□ 2.55
YBX1-203ENST00000436427 CCDC144AA2RUR9 1427 aa30.98■■■□□ 2.55
YBX1-203ENST00000436427 PTPRTO14522 1441 aa30.98■■■□□ 2.55
YBX1-203ENST00000436427 CNTLNQ9NXG0 1405 aa30.98■■■□□ 2.55
YBX1-203ENST00000436427 TRPM2O94759 1503 aa30.97■■■□□ 2.55
YBX1-203ENST00000436427 FER1L4A9Z1Z3 1794 aa30.97■■■□□ 2.55
YBX1-203ENST00000436427 CFAP65Q6ZU64 1925 aaKnown RBP30.95■■■□□ 2.55
YBX1-203ENST00000436427 ZMYM3Q14202 1370 aa30.93■■■□□ 2.54
YBX1-203ENST00000436427 TONSLQ96HA7 1378 aa30.92■■■□□ 2.54
YBX1-203ENST00000436427 MROH2AA6NES4 1674 aa30.92■■■□□ 2.54
YBX1-203ENST00000436427 PREX1Q8TCU6 1659 aa30.9■■■□□ 2.54
YBX1-203ENST00000436427 NOS1P29475 1434 aa30.89■■■□□ 2.54
YBX1-203ENST00000436427 MADDQ8WXG6 1647 aa30.88■■■□□ 2.53
YBX1-203ENST00000436427 CLTCL1P53675 1640 aa30.88■■■□□ 2.53
YBX1-203ENST00000436427 FBXO31Q5XUX0 539 aaPredicted RBP30.88■■■□□ 2.53
YBX1-203ENST00000436427 ERVK-7P63135 1459 aa30.87■■■□□ 2.53
YBX1-203ENST00000436427 UGGT1Q9NYU2 1555 aa30.86■■■□□ 2.53
YBX1-203ENST00000436427 ADAMTSL3P82987 1691 aa30.86■■■□□ 2.53
YBX1-203ENST00000436427 SYNMO15061 1565 aa30.85■■■□□ 2.53
YBX1-203ENST00000436427 TIMELESSQ9UNS1 1208 aa30.84■■■□□ 2.53
YBX1-203ENST00000436427 RIMS1Q86UR5 1692 aaKnown RBP30.83■■■□□ 2.53
YBX1-203ENST00000436427 SPATA31D1Q6ZQQ2 1576 aa30.82■■■□□ 2.52
YBX1-203ENST00000436427 C3P01024 1663 aa30.81■■■□□ 2.52
YBX1-203ENST00000436427 PLPPR3Q6T4P5 718 aa30.79■■■□□ 2.52
YBX1-203ENST00000436427 CEBPAP49715 358 aaPredicted RBP30.78■■■□□ 2.52
YBX1-203ENST00000436427 PIK3C2BO00750 1634 aa30.77■■■□□ 2.52
YBX1-203ENST00000436427 L3MBTL2Q969R5 705 aa30.76■■■□□ 2.51
YBX1-203ENST00000436427 RGL3Q3MIN7 710 aa30.75■■■□□ 2.51
YBX1-203ENST00000436427 SLC52A1Q9NWF4 448 aa30.75■■■□□ 2.51
YBX1-203ENST00000436427 KIF1BO60333 1816 aa30.75■■■□□ 2.51
YBX1-203ENST00000436427 CHGAP10645 457 aaKnown RBP30.73■■■□□ 2.51
YBX1-203ENST00000436427 SPATA31E1Q6ZUB1 1445 aa30.72■■■□□ 2.51
YBX1-203ENST00000436427 TNRQ92752 1358 aa30.72■■■□□ 2.51
YBX1-203ENST00000436427 IDI1Q13907 227 aa30.71■■■□□ 2.51
YBX1-203ENST00000436427 ADGRB3O60242 1522 aa30.67■■■□□ 2.5
YBX1-203ENST00000436427 PPP1R15AO75807 674 aaPredicted RBP30.67■■■□□ 2.5
YBX1-203ENST00000436427 NEURL4Q96JN8 1562 aa30.67■■■□□ 2.5
YBX1-203ENST00000436427 DCAF11Q8TEB1 546 aa30.65■■■□□ 2.5
YBX1-203ENST00000436427 ZNF326Q5BKZ1 582 aaKnown RBP30.63■■■□□ 2.49
YBX1-203ENST00000436427 STAG3Q9UJ98 1225 aa30.62■■■□□ 2.49
YBX1-203ENST00000436427 KDM2AQ9Y2K7 1162 aa30.62■■■□□ 2.49
YBX1-203ENST00000436427 PTPRMP28827 1452 aa30.61■■■□□ 2.49
YBX1-203ENST00000436427 TMEM131LA2VDJ0 1609 aa30.6■■■□□ 2.49
YBX1-203ENST00000436427 NLRP1Q9C000 1473 aa30.58■■■□□ 2.49
YBX1-203ENST00000436427 MYO5BQ9ULV0 1848 aa30.56■■■□□ 2.48
YBX1-203ENST00000436427 MYO3AQ8NEV4 1616 aa30.54■■■□□ 2.48
YBX1-203ENST00000436427 A2ML1A8K2U0 1454 aa30.52■■■□□ 2.48
YBX1-203ENST00000436427 KDM4FA0A1W2PPD8 638 aa30.52■■■□□ 2.48
YBX1-203ENST00000436427 IFT172Q9UG01 1749 aa30.51■■■□□ 2.47
YBX1-203ENST00000436427 RPGRIP1LQ68CZ1 1315 aa30.51■■■□□ 2.47
YBX1-203ENST00000436427 NBPF8Q3BBV2 869 aa30.5■■■□□ 2.47
YBX1-203ENST00000436427 UHRF1BP1Q6BDS2 1440 aa30.49■■■□□ 2.47
YBX1-203ENST00000436427 PPLO60437 1756 aa30.48■■■□□ 2.47
YBX1-203ENST00000436427 UBR1Q8IWV7 1749 aa30.48■■■□□ 2.47
YBX1-203ENST00000436427 KDM5AP29375 1690 aaKnown RBP30.48■■■□□ 2.47
YBX1-203ENST00000436427 STAC3Q96MF2 364 aa30.47■■■□□ 2.47
YBX1-203ENST00000436427 NEXMIFQ5QGS0 1516 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms