RNA–Protein interactions for RNA: ENST00000435795.5

TSSC4-204, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-204ENST00000435795 PPP6R1Q9UPN7 881 aa23.26■■□□□ 1.31
TSSC4-204ENST00000435795 ESF1Q9H501 851 aaKnown RBP23.25■■□□□ 1.31
TSSC4-204ENST00000435795 ACIN1Q9UKV3 1341 aaKnown RBP23.25■■□□□ 1.31
TSSC4-204ENST00000435795 EIF2AK4Q9P2K8 1649 aaKnown RBP23.24■■□□□ 1.31
TSSC4-204ENST00000435795 GCC2Q8IWJ2 1684 aa23.24■■□□□ 1.31
TSSC4-204ENST00000435795 KANK1Q14678 1352 aa23.24■■□□□ 1.31
TSSC4-204ENST00000435795 SIGLEC1Q9BZZ2 1709 aa23.23■■□□□ 1.31
TSSC4-204ENST00000435795 NUP155O75694 1391 aa23.23■■□□□ 1.31
TSSC4-204ENST00000435795 WASHC2CQ9Y4E1 1318 aa23.22■■□□□ 1.31
TSSC4-204ENST00000435795 BCORL1Q5H9F3 1711 aa23.18■■□□□ 1.3
TSSC4-204ENST00000435795 RNF17Q9BXT8 1623 aaKnown RBP23.16■■□□□ 1.3
TSSC4-204ENST00000435795 MROH1Q8NDA8 1641 aa23.13■■□□□ 1.29
TSSC4-204ENST00000435795 SLC4A1APQ9BWU0 796 aaKnown RBP23.13■■□□□ 1.29
TSSC4-204ENST00000435795 PRDM15P57071 1507 aaPredicted RBP23.13■■□□□ 1.29
TSSC4-204ENST00000435795 UNC13BO14795 1591 aa23.12■■□□□ 1.29
TSSC4-204ENST00000435795 CNTLNQ9NXG0 1405 aa23.12■■□□□ 1.29
TSSC4-204ENST00000435795 DEPDC5O75140 1603 aa23.11■■□□□ 1.29
TSSC4-204ENST00000435795 MPHOSPH9Q99550 1183 aa23.11■■□□□ 1.29
TSSC4-204ENST00000435795 KDM5DQ9BY66 1539 aa23.1■■□□□ 1.29
TSSC4-204ENST00000435795 KDM4FA0A1W2PPD8 638 aa23.1■■□□□ 1.29
TSSC4-204ENST00000435795 ABCC3O15438 1527 aa23.09■■□□□ 1.29
TSSC4-204ENST00000435795 ZMYM3Q14202 1370 aa23.09■■□□□ 1.29
TSSC4-204ENST00000435795 FAM135AQ9P2D6 1515 aa23.08■■□□□ 1.29
TSSC4-204ENST00000435795 VWDEQ8N2E2 1590 aa23.08■■□□□ 1.29
TSSC4-204ENST00000435795 PLPPR3Q6T4P5 718 aa23.07■■□□□ 1.28
TSSC4-204ENST00000435795 PKD2Q13563 968 aa23.06■■□□□ 1.28
TSSC4-204ENST00000435795 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
TSSC4-204ENST00000435795 ADAMTSL3P82987 1691 aa23.06■■□□□ 1.28
TSSC4-204ENST00000435795 PZPP20742 1482 aa23.05■■□□□ 1.28
TSSC4-204ENST00000435795 CEBPAP49715 358 aaPredicted RBP23.04■■□□□ 1.28
TSSC4-204ENST00000435795 IQGAP3Q86VI3 1631 aa23.03■■□□□ 1.28
TSSC4-204ENST00000435795 MADDQ8WXG6 1647 aa23.03■■□□□ 1.28
TSSC4-204ENST00000435795 ARHGAP31Q2M1Z3 1444 aa23■■□□□ 1.27
TSSC4-204ENST00000435795 FBXO31Q5XUX0 539 aaPredicted RBP23■■□□□ 1.27
TSSC4-204ENST00000435795 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
TSSC4-204ENST00000435795 FOXD1Q16676 465 aa22.99■■□□□ 1.27
TSSC4-204ENST00000435795 ZC3H13Q5T200 1668 aaKnown RBP22.99■■□□□ 1.27
TSSC4-204ENST00000435795 FER1L4A9Z1Z3 1794 aa22.99■■□□□ 1.27
TSSC4-204ENST00000435795 NPATQ14207 1427 aa22.99■■□□□ 1.27
TSSC4-204ENST00000435795 PTPRMP28827 1452 aa22.98■■□□□ 1.27
TSSC4-204ENST00000435795 CEP152O94986 1710 aa22.97■■□□□ 1.27
TSSC4-204ENST00000435795 EFCAB6Q5THR3 1501 aa22.96■■□□□ 1.27
TSSC4-204ENST00000435795 RIMS1Q86UR5 1692 aaKnown RBP22.96■■□□□ 1.27
TSSC4-204ENST00000435795 TET3O43151 1660 aa22.95■■□□□ 1.26
TSSC4-204ENST00000435795 CAMSAP1Q5T5Y3 1602 aa22.94■■□□□ 1.26
TSSC4-204ENST00000435795 RPRD2Q5VT52 1461 aaKnown RBP22.94■■□□□ 1.26
TSSC4-204ENST00000435795 DHX57Q6P158 1386 aaKnown RBP22.94■■□□□ 1.26
TSSC4-204ENST00000435795 MROH2AA6NES4 1674 aa22.92■■□□□ 1.26
TSSC4-204ENST00000435795 ERVK-7P63135 1459 aa22.9■■□□□ 1.26
TSSC4-204ENST00000435795 TNRQ92752 1358 aa22.89■■□□□ 1.26
TSSC4-204ENST00000435795 NOS1P29475 1434 aa22.89■■□□□ 1.25
TSSC4-204ENST00000435795 PTPRTO14522 1441 aa22.87■■□□□ 1.25
TSSC4-204ENST00000435795 SLC52A1Q9NWF4 448 aa22.86■■□□□ 1.25
TSSC4-204ENST00000435795 E9PCH4 1651 aa22.86■■□□□ 1.25
TSSC4-204ENST00000435795 C3P01024 1663 aa22.86■■□□□ 1.25
TSSC4-204ENST00000435795 CCER1Q8TC90 406 aaPredicted RBP22.85■■□□□ 1.25
TSSC4-204ENST00000435795 ANKRD30BQ9BXX2 1392 aa22.85■■□□□ 1.25
TSSC4-204ENST00000435795 PLA2R1Q13018 1463 aa22.84■■□□□ 1.25
TSSC4-204ENST00000435795 SPATA31D1Q6ZQQ2 1576 aa22.84■■□□□ 1.25
TSSC4-204ENST00000435795 IDI1Q13907 227 aa22.83■■□□□ 1.25
TSSC4-204ENST00000435795 PREX1Q8TCU6 1659 aa22.79■■□□□ 1.24
TSSC4-204ENST00000435795 CHGAP10645 457 aaKnown RBP22.79■■□□□ 1.24
TSSC4-204ENST00000435795 STAG3Q9UJ98 1225 aa22.79■■□□□ 1.24
TSSC4-204ENST00000435795 CCDC144AA2RUR9 1427 aa22.79■■□□□ 1.24
TSSC4-204ENST00000435795 CFAP65Q6ZU64 1925 aaKnown RBP22.78■■□□□ 1.24
TSSC4-204ENST00000435795 TRPM2O94759 1503 aa22.77■■□□□ 1.24
TSSC4-204ENST00000435795 SYNMO15061 1565 aa22.76■■□□□ 1.23
TSSC4-204ENST00000435795 NLRP1Q9C000 1473 aa22.75■■□□□ 1.23
TSSC4-204ENST00000435795 SIN3AQ96ST3 1273 aa22.75■■□□□ 1.23
TSSC4-204ENST00000435795 UHRF1BP1Q6BDS2 1440 aa22.74■■□□□ 1.23
TSSC4-204ENST00000435795 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
TSSC4-204ENST00000435795 CLSPNQ9HAW4 1339 aa22.74■■□□□ 1.23
TSSC4-204ENST00000435795 UGGT1Q9NYU2 1555 aa22.73■■□□□ 1.23
TSSC4-204ENST00000435795 ILDR1Q86SU0 546 aaPredicted RBP22.73■■□□□ 1.23
TSSC4-204ENST00000435795 SPHKAPQ2M3C7 1700 aa22.73■■□□□ 1.23
TSSC4-204ENST00000435795 SETD1BQ9UPS6 1966 aaKnown RBP22.7■■□□□ 1.23
TSSC4-204ENST00000435795 A2ML1A8K2U0 1454 aa22.7■■□□□ 1.22
TSSC4-204ENST00000435795 THEMISQ8N1K5 641 aaPredicted RBP22.69■■□□□ 1.22
TSSC4-204ENST00000435795 RGL3Q3MIN7 710 aa22.68■■□□□ 1.22
TSSC4-204ENST00000435795 ZNF326Q5BKZ1 582 aaKnown RBP22.68■■□□□ 1.22
TSSC4-204ENST00000435795 CLTCL1P53675 1640 aa22.68■■□□□ 1.22
TSSC4-204ENST00000435795 PIK3C2BO00750 1634 aa22.65■■□□□ 1.22
TSSC4-204ENST00000435795 MYO3AQ8NEV4 1616 aa22.65■■□□□ 1.22
TSSC4-204ENST00000435795 CEP170BQ9Y4F5 1589 aaPredicted RBP22.63■■□□□ 1.21
TSSC4-204ENST00000435795 SPATA31E1Q6ZUB1 1445 aa22.62■■□□□ 1.21
TSSC4-204ENST00000435795 ADGRB3O60242 1522 aa22.62■■□□□ 1.21
TSSC4-204ENST00000435795 HDGFP51858 240 aaKnown RBP22.61■■□□□ 1.21
TSSC4-204ENST00000435795 HSPA2P54652 639 aa22.61■■□□□ 1.21
TSSC4-204ENST00000435795 RPGRIP1LQ68CZ1 1315 aa22.6■■□□□ 1.21
TSSC4-204ENST00000435795 TMEM2Q9UHN6 1383 aa22.59■■□□□ 1.21
TSSC4-204ENST00000435795 LMTK3Q96Q04 1460 aa22.59■■□□□ 1.21
TSSC4-204ENST00000435795 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.58■■□□□ 1.21
TSSC4-204ENST00000435795 EID1Q9Y6B2 187 aa22.58■■□□□ 1.21
TSSC4-204ENST00000435795 TMEM131LA2VDJ0 1609 aa22.57■■□□□ 1.2
TSSC4-204ENST00000435795 TXNDC2Q86VQ3 553 aa22.57■■□□□ 1.2
TSSC4-204ENST00000435795 ANKLE2Q86XL3 938 aa22.57■■□□□ 1.2
TSSC4-204ENST00000435795 TONSLQ96HA7 1378 aa22.56■■□□□ 1.2
TSSC4-204ENST00000435795 NUTM2DQ5VT03 806 aaPredicted RBP22.56■■□□□ 1.2
TSSC4-204ENST00000435795 RIMS2Q9UQ26 1411 aa22.56■■□□□ 1.2
TSSC4-204ENST00000435795 PPP1R15AO75807 674 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms