RNA–Protein interactions for RNA: ENST00000435795.5

TSSC4-204, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-204ENST00000435795 NISCHQ9Y2I1 1504 aa36.84■■■■□ 3.49
TSSC4-204ENST00000435795 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
TSSC4-204ENST00000435795 ABCC9O60706 1549 aa31.43■■■□□ 2.62
TSSC4-204ENST00000435795 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
TSSC4-204ENST00000435795 ZCCHC6Q5VYS8 1495 aaKnown RBP30.76■■■□□ 2.52
TSSC4-204ENST00000435795 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
TSSC4-204ENST00000435795 NACADO15069 1562 aa30.45■■■□□ 2.47
TSSC4-204ENST00000435795 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
TSSC4-204ENST00000435795 RB1CC1Q8TDY2 1594 aa30.36■■■□□ 2.45
TSSC4-204ENST00000435795 SCRIBQ14160 1630 aa29.7■■■□□ 2.34
TSSC4-204ENST00000435795 PABPN1Q86U42 306 aaKnown RBP eCLIP29.55■■■□□ 2.32
TSSC4-204ENST00000435795 SHROOM4Q9ULL8 1493 aa29.53■■■□□ 2.32
TSSC4-204ENST00000435795 UNC13AQ9UPW8 1703 aa29.49■■■□□ 2.31
TSSC4-204ENST00000435795 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.29
TSSC4-204ENST00000435795 CECR2Q9BXF3 1484 aa28.68■■■□□ 2.18
TSSC4-204ENST00000435795 EIF4G1Q04637 1599 aaKnown RBP28.6■■■□□ 2.17
TSSC4-204ENST00000435795 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
TSSC4-204ENST00000435795 DNAJC5BQ9UF47 199 aa28.46■■■□□ 2.15
TSSC4-204ENST00000435795 SMARCA4P51532 1647 aa28.42■■■□□ 2.14
TSSC4-204ENST00000435795 MROH2BQ7Z745 1585 aa28.41■■■□□ 2.14
TSSC4-204ENST00000435795 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
TSSC4-204ENST00000435795 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
TSSC4-204ENST00000435795 ATAD2BQ9ULI0 1458 aa28.24■■■□□ 2.11
TSSC4-204ENST00000435795 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
TSSC4-204ENST00000435795 NCAPD3P42695 1498 aa28.15■■■□□ 2.1
TSSC4-204ENST00000435795 PEG3Q9GZU2 1588 aa28.12■■■□□ 2.09
TSSC4-204ENST00000435795 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
TSSC4-204ENST00000435795 WIZO95785 1651 aa28.07■■■□□ 2.08
TSSC4-204ENST00000435795 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
TSSC4-204ENST00000435795 HMGXB3Q12766 1538 aa27.97■■■□□ 2.07
TSSC4-204ENST00000435795 TOP2AP11388 1531 aaKnown RBP27.83■■■□□ 2.05
TSSC4-204ENST00000435795 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
TSSC4-204ENST00000435795 CADPSQ9ULU8 1353 aa27.4■■□□□ 1.98
TSSC4-204ENST00000435795 NESP48681 1621 aa27.3■■□□□ 1.96
TSSC4-204ENST00000435795 CFTRP13569 1480 aa27.28■■□□□ 1.96
TSSC4-204ENST00000435795 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
TSSC4-204ENST00000435795 PDS5BQ9NTI5 1447 aa27.16■■□□□ 1.94
TSSC4-204ENST00000435795 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
TSSC4-204ENST00000435795 FANCD2Q9BXW9 1451 aa27.04■■□□□ 1.92
TSSC4-204ENST00000435795 CEP164Q9UPV0 1460 aa26.94■■□□□ 1.9
TSSC4-204ENST00000435795 PRDM2Q13029 1718 aa26.87■■□□□ 1.89
TSSC4-204ENST00000435795 KIF21AQ7Z4S6 1674 aa26.85■■□□□ 1.89
TSSC4-204ENST00000435795 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
TSSC4-204ENST00000435795 URB2Q14146 1524 aaKnown RBP26.71■■□□□ 1.87
TSSC4-204ENST00000435795 ABCC8Q09428 1581 aa26.68■■□□□ 1.86
TSSC4-204ENST00000435795 THOC2Q8NI27 1593 aaKnown RBP26.68■■□□□ 1.86
TSSC4-204ENST00000435795 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
TSSC4-204ENST00000435795 WDR62O43379 1518 aa26.65■■□□□ 1.86
TSSC4-204ENST00000435795 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
TSSC4-204ENST00000435795 DNMBPQ6XZF7 1577 aa26.62■■□□□ 1.85
TSSC4-204ENST00000435795 CUX1P39880 1505 aa26.61■■□□□ 1.85
TSSC4-204ENST00000435795 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
TSSC4-204ENST00000435795 CUX2O14529 1486 aa26.54■■□□□ 1.84
TSSC4-204ENST00000435795 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
TSSC4-204ENST00000435795 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
TSSC4-204ENST00000435795 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
TSSC4-204ENST00000435795 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
TSSC4-204ENST00000435795 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
TSSC4-204ENST00000435795 POLA1P09884 1462 aaPredicted RBP26.45■■□□□ 1.82
TSSC4-204ENST00000435795 SOGA1O94964 1423 aa26.42■■□□□ 1.82
TSSC4-204ENST00000435795 BIVM-ERCC5R4GMW8 1640 aa26.41■■□□□ 1.82
TSSC4-204ENST00000435795 IFT140Q96RY7 1462 aa26.38■■□□□ 1.81
TSSC4-204ENST00000435795 RAD54L2Q9Y4B4 1467 aa26.37■■□□□ 1.81
TSSC4-204ENST00000435795 TARBP1Q13395 1621 aaKnown RBP26.24■■□□□ 1.79
TSSC4-204ENST00000435795 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
TSSC4-204ENST00000435795 ABCA10Q8WWZ4 1543 aa26.23■■□□□ 1.79
TSSC4-204ENST00000435795 ZNF608Q9ULD9 1512 aaPredicted RBP26.21■■□□□ 1.79
TSSC4-204ENST00000435795 AQRO60306 1485 aaKnown RBP eCLIP26.17■■□□□ 1.78
TSSC4-204ENST00000435795 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
TSSC4-204ENST00000435795 GAPVD1Q14C86 1478 aa26.09■■□□□ 1.77
TSSC4-204ENST00000435795 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
TSSC4-204ENST00000435795 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
TSSC4-204ENST00000435795 GRIN2BQ13224 1484 aa26.02■■□□□ 1.76
TSSC4-204ENST00000435795 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
TSSC4-204ENST00000435795 RUSC2Q8N2Y8 1516 aa25.99■■□□□ 1.75
TSSC4-204ENST00000435795 FAM9AQ8IZU1 332 aaPredicted RBP25.96■■□□□ 1.75
TSSC4-204ENST00000435795 IGF1RP08069 1367 aa25.95■■□□□ 1.75
TSSC4-204ENST00000435795 EEA1Q15075 1411 aa25.92■■□□□ 1.74
TSSC4-204ENST00000435795 SNAPC4Q5SXM2 1469 aa25.91■■□□□ 1.74
TSSC4-204ENST00000435795 CSRNP3Q8WYN3 585 aa25.9■■□□□ 1.74
TSSC4-204ENST00000435795 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.74
TSSC4-204ENST00000435795 MAGI1Q96QZ7 1491 aaPredicted RBP25.86■■□□□ 1.73
TSSC4-204ENST00000435795 FBLN2P98095 1184 aa25.86■■□□□ 1.73
TSSC4-204ENST00000435795 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
TSSC4-204ENST00000435795 PBRM1Q86U86 1689 aa25.83■■□□□ 1.73
TSSC4-204ENST00000435795 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
TSSC4-204ENST00000435795 FHAD1B1AJZ9 1412 aa25.82■■□□□ 1.72
TSSC4-204ENST00000435795 SYNJ2O15056 1496 aa25.77■■□□□ 1.72
TSSC4-204ENST00000435795 ADAMTS12P58397 1594 aa25.73■■□□□ 1.71
TSSC4-204ENST00000435795 CUL7Q14999 1698 aa25.7■■□□□ 1.7
TSSC4-204ENST00000435795 PRXQ9BXM0 1461 aa25.69■■□□□ 1.7
TSSC4-204ENST00000435795 RAPGEF2Q9Y4G8 1499 aa25.67■■□□□ 1.7
TSSC4-204ENST00000435795 OSCARQ8IYS5 282 aa25.66■■□□□ 1.7
TSSC4-204ENST00000435795 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
TSSC4-204ENST00000435795 EHMT2Q96KQ7 1210 aa25.6■■□□□ 1.69
TSSC4-204ENST00000435795 CHD1O14646 1710 aa25.56■■□□□ 1.68
TSSC4-204ENST00000435795 NUP160Q12769 1436 aa25.53■■□□□ 1.68
TSSC4-204ENST00000435795 KIF21BO75037 1637 aa25.51■■□□□ 1.67
TSSC4-204ENST00000435795 UBTFP17480 764 aaKnown RBP25.5■■□□□ 1.67
TSSC4-204ENST00000435795 GOLGA3Q08378 1498 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms