RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 WASHC2CQ9Y4E1 1318 aa24.6■■□□□ 1.53
CTDSPL-204ENST00000435525 GCC2Q8IWJ2 1684 aa24.59■■□□□ 1.53
CTDSPL-204ENST00000435525 TRIM52Q96A61 297 aa24.58■■□□□ 1.53
CTDSPL-204ENST00000435525 BCORL1Q5H9F3 1711 aa24.58■■□□□ 1.52
CTDSPL-204ENST00000435525 CNTLNQ9NXG0 1405 aa24.57■■□□□ 1.52
CTDSPL-204ENST00000435525 FAM135AQ9P2D6 1515 aa24.56■■□□□ 1.52
CTDSPL-204ENST00000435525 HRCP23327 699 aa24.56■■□□□ 1.52
CTDSPL-204ENST00000435525 PCGF6Q9BYE7 350 aa24.56■■□□□ 1.52
CTDSPL-204ENST00000435525 NUP155O75694 1391 aa24.54■■□□□ 1.52
CTDSPL-204ENST00000435525 RNF17Q9BXT8 1623 aaKnown RBP24.54■■□□□ 1.52
CTDSPL-204ENST00000435525 RAB3GAP2Q9H2M9 1393 aa24.54■■□□□ 1.52
CTDSPL-204ENST00000435525 SIGLEC1Q9BZZ2 1709 aa24.52■■□□□ 1.52
CTDSPL-204ENST00000435525 PRDM15P57071 1507 aaPredicted RBP24.51■■□□□ 1.51
CTDSPL-204ENST00000435525 KDM5DQ9BY66 1539 aa24.51■■□□□ 1.51
CTDSPL-204ENST00000435525 DEPDC5O75140 1603 aa24.47■■□□□ 1.51
CTDSPL-204ENST00000435525 UNC13BO14795 1591 aa24.47■■□□□ 1.51
CTDSPL-204ENST00000435525 ADAMTSL3P82987 1691 aa24.45■■□□□ 1.5
CTDSPL-204ENST00000435525 KDM4FA0A1W2PPD8 638 aa24.44■■□□□ 1.5
CTDSPL-204ENST00000435525 SLC4A1APQ9BWU0 796 aaKnown RBP24.44■■□□□ 1.5
CTDSPL-204ENST00000435525 ABCC3O15438 1527 aa24.44■■□□□ 1.5
CTDSPL-204ENST00000435525 ZMYM3Q14202 1370 aa24.43■■□□□ 1.5
CTDSPL-204ENST00000435525 MROH1Q8NDA8 1641 aa24.43■■□□□ 1.5
CTDSPL-204ENST00000435525 ZC3H13Q5T200 1668 aaKnown RBP24.43■■□□□ 1.5
CTDSPL-204ENST00000435525 MADDQ8WXG6 1647 aa24.43■■□□□ 1.5
CTDSPL-204ENST00000435525 LMTK2Q8IWU2 1503 aa24.41■■□□□ 1.5
CTDSPL-204ENST00000435525 FER1L4A9Z1Z3 1794 aa24.41■■□□□ 1.5
CTDSPL-204ENST00000435525 VWDEQ8N2E2 1590 aa24.41■■□□□ 1.5
CTDSPL-204ENST00000435525 PLPPR3Q6T4P5 718 aa24.38■■□□□ 1.49
CTDSPL-204ENST00000435525 ARHGAP31Q2M1Z3 1444 aa24.37■■□□□ 1.49
CTDSPL-204ENST00000435525 IQGAP3Q86VI3 1631 aa24.37■■□□□ 1.49
CTDSPL-204ENST00000435525 PTPRMP28827 1452 aa24.37■■□□□ 1.49
CTDSPL-204ENST00000435525 CLTCQ00610 1675 aaKnown RBP24.37■■□□□ 1.49
CTDSPL-204ENST00000435525 MPHOSPH9Q99550 1183 aa24.36■■□□□ 1.49
CTDSPL-204ENST00000435525 MROH2AA6NES4 1674 aa24.36■■□□□ 1.49
CTDSPL-204ENST00000435525 RIMS1Q86UR5 1692 aaKnown RBP24.36■■□□□ 1.49
CTDSPL-204ENST00000435525 PZPP20742 1482 aa24.34■■□□□ 1.49
CTDSPL-204ENST00000435525 PKD2Q13563 968 aa24.34■■□□□ 1.49
CTDSPL-204ENST00000435525 RPRD2Q5VT52 1461 aaKnown RBP24.33■■□□□ 1.49
CTDSPL-204ENST00000435525 CEBPAP49715 358 aaPredicted RBP24.33■■□□□ 1.49
CTDSPL-204ENST00000435525 TET3O43151 1660 aa24.32■■□□□ 1.48
CTDSPL-204ENST00000435525 EFCAB6Q5THR3 1501 aa24.31■■□□□ 1.48
CTDSPL-204ENST00000435525 CAMSAP1Q5T5Y3 1602 aa24.31■■□□□ 1.48
CTDSPL-204ENST00000435525 CEP152O94986 1710 aa24.3■■□□□ 1.48
CTDSPL-204ENST00000435525 NPATQ14207 1427 aa24.3■■□□□ 1.48
CTDSPL-204ENST00000435525 AEBP2Q6ZN18 517 aaPredicted RBP24.27■■□□□ 1.48
CTDSPL-204ENST00000435525 FBXO31Q5XUX0 539 aaPredicted RBP24.26■■□□□ 1.47
CTDSPL-204ENST00000435525 TNRQ92752 1358 aa24.26■■□□□ 1.47
CTDSPL-204ENST00000435525 ERVK-7P63135 1459 aa24.24■■□□□ 1.47
CTDSPL-204ENST00000435525 C3P01024 1663 aa24.23■■□□□ 1.47
CTDSPL-204ENST00000435525 SLC52A1Q9NWF4 448 aa24.22■■□□□ 1.47
CTDSPL-204ENST00000435525 NOS1P29475 1434 aa24.19■■□□□ 1.46
CTDSPL-204ENST00000435525 SPATA31D1Q6ZQQ2 1576 aa24.19■■□□□ 1.46
CTDSPL-204ENST00000435525 E9PCH4 1651 aa24.18■■□□□ 1.46
CTDSPL-204ENST00000435525 FOXD1Q16676 465 aa24.17■■□□□ 1.46
CTDSPL-204ENST00000435525 STAG3Q9UJ98 1225 aa24.17■■□□□ 1.46
CTDSPL-204ENST00000435525 UHRF1BP1Q6BDS2 1440 aa24.17■■□□□ 1.46
CTDSPL-204ENST00000435525 NLRP1Q9C000 1473 aa24.16■■□□□ 1.46
CTDSPL-204ENST00000435525 PTPRTO14522 1441 aa24.16■■□□□ 1.46
CTDSPL-204ENST00000435525 PREX1Q8TCU6 1659 aa24.14■■□□□ 1.45
CTDSPL-204ENST00000435525 DHX57Q6P158 1386 aaKnown RBP24.14■■□□□ 1.45
CTDSPL-204ENST00000435525 CCDC144AA2RUR9 1427 aa24.12■■□□□ 1.45
CTDSPL-204ENST00000435525 IDI1Q13907 227 aa24.1■■□□□ 1.45
CTDSPL-204ENST00000435525 TRPM2O94759 1503 aa24.1■■□□□ 1.45
CTDSPL-204ENST00000435525 CHGAP10645 457 aaKnown RBP24.09■■□□□ 1.45
CTDSPL-204ENST00000435525 THEMISQ8N1K5 641 aaPredicted RBP24.09■■□□□ 1.45
CTDSPL-204ENST00000435525 A2ML1A8K2U0 1454 aa24.08■■□□□ 1.45
CTDSPL-204ENST00000435525 ANKRD30BQ9BXX2 1392 aa24.08■■□□□ 1.45
CTDSPL-204ENST00000435525 SETD1BQ9UPS6 1966 aaKnown RBP24.07■■□□□ 1.44
CTDSPL-204ENST00000435525 CCER1Q8TC90 406 aaPredicted RBP24.07■■□□□ 1.44
CTDSPL-204ENST00000435525 SPHKAPQ2M3C7 1700 aa24.07■■□□□ 1.44
CTDSPL-204ENST00000435525 SYNMO15061 1565 aa24.06■■□□□ 1.44
CTDSPL-204ENST00000435525 PLA2R1Q13018 1463 aa24.06■■□□□ 1.44
CTDSPL-204ENST00000435525 MYO3AQ8NEV4 1616 aa24.03■■□□□ 1.44
CTDSPL-204ENST00000435525 HDGFP51858 240 aaKnown RBP24.03■■□□□ 1.44
CTDSPL-204ENST00000435525 CLSPNQ9HAW4 1339 aa24.03■■□□□ 1.44
CTDSPL-204ENST00000435525 CFAP65Q6ZU64 1925 aaKnown RBP24.02■■□□□ 1.44
CTDSPL-204ENST00000435525 UGGT1Q9NYU2 1555 aa24.02■■□□□ 1.44
CTDSPL-204ENST00000435525 CEP170BQ9Y4F5 1589 aaPredicted RBP24.01■■□□□ 1.43
CTDSPL-204ENST00000435525 ZNF326Q5BKZ1 582 aaKnown RBP24.01■■□□□ 1.43
CTDSPL-204ENST00000435525 EID1Q9Y6B2 187 aa23.98■■□□□ 1.43
CTDSPL-204ENST00000435525 PIK3C2BO00750 1634 aa23.97■■□□□ 1.43
CTDSPL-204ENST00000435525 ADGRB3O60242 1522 aa23.97■■□□□ 1.43
CTDSPL-204ENST00000435525 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.96■■□□□ 1.43
CTDSPL-204ENST00000435525 ZNF142P52746 1687 aaPredicted RBP23.95■■□□□ 1.43
CTDSPL-204ENST00000435525 CLTCL1P53675 1640 aa23.95■■□□□ 1.43
CTDSPL-204ENST00000435525 LMTK3Q96Q04 1460 aa23.95■■□□□ 1.42
CTDSPL-204ENST00000435525 RPGRIP1LQ68CZ1 1315 aa23.94■■□□□ 1.42
CTDSPL-204ENST00000435525 NEUROD1Q13562 356 aa23.94■■□□□ 1.42
CTDSPL-204ENST00000435525 ANKLE2Q86XL3 938 aa23.94■■□□□ 1.42
CTDSPL-204ENST00000435525 RGL3Q3MIN7 710 aa23.93■■□□□ 1.42
CTDSPL-204ENST00000435525 TMEM2Q9UHN6 1383 aa23.92■■□□□ 1.42
CTDSPL-204ENST00000435525 PPP1R15AO75807 674 aaPredicted RBP23.92■■□□□ 1.42
CTDSPL-204ENST00000435525 KDM5AP29375 1690 aaKnown RBP23.92■■□□□ 1.42
CTDSPL-204ENST00000435525 HSPA2P54652 639 aa23.91■■□□□ 1.42
CTDSPL-204ENST00000435525 TXNDC2Q86VQ3 553 aa23.89■■□□□ 1.41
CTDSPL-204ENST00000435525 SIN3AQ96ST3 1273 aa23.89■■□□□ 1.41
CTDSPL-204ENST00000435525 TMEM131LA2VDJ0 1609 aa23.88■■□□□ 1.41
CTDSPL-204ENST00000435525 STAC3Q96MF2 364 aa23.88■■□□□ 1.41
CTDSPL-204ENST00000435525 UBR1Q8IWV7 1749 aa23.87■■□□□ 1.41
CTDSPL-204ENST00000435525 NEURL4Q96JN8 1562 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms