RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.15□□□□□ -0.14
NOD1-206ENST00000434755 KNSTRNQ9Y448 316 aa14.15□□□□□ -0.14
NOD1-206ENST00000434755 NAIPQ13075 1403 aa14.14□□□□□ -0.15
NOD1-206ENST00000434755 ABCC5O15440 1437 aa14.14□□□□□ -0.15
NOD1-206ENST00000434755 SAFB2Q14151 953 aaKnown RBP eCLIP14.13□□□□□ -0.15
NOD1-206ENST00000434755 TNNT2P45379 298 aaPredicted RBP14.13□□□□□ -0.15
NOD1-206ENST00000434755 TCOF1Q13428 1488 aaKnown RBP14.12□□□□□ -0.15
NOD1-206ENST00000434755 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
NOD1-206ENST00000434755 LMOD2Q6P5Q4 547 aa14.11□□□□□ -0.15
NOD1-206ENST00000434755 CFAP53Q96M91 514 aa14.11□□□□□ -0.15
NOD1-206ENST00000434755 CHD1O14646 1710 aa14.1□□□□□ -0.15
NOD1-206ENST00000434755 NCOA1Q15788 1441 aa14.09□□□□□ -0.15
NOD1-206ENST00000434755 SLC52A1Q9NWF4 448 aa14.09□□□□□ -0.15
NOD1-206ENST00000434755 RTL5Q5HYW3 569 aaPredicted RBP14.09□□□□□ -0.15
NOD1-206ENST00000434755 NEUROD2Q15784 382 aa14.08□□□□□ -0.15
NOD1-206ENST00000434755 SHANK2Q9UPX8 1470 aa14.08□□□□□ -0.16
NOD1-206ENST00000434755 ABCA8O94911 1581 aa14.08□□□□□ -0.16
NOD1-206ENST00000434755 RALBP1Q15311 655 aa14.07□□□□□ -0.16
NOD1-206ENST00000434755 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.07□□□□□ -0.16
NOD1-206ENST00000434755 ERICH6BQ5W0A0 696 aa14.06□□□□□ -0.16
NOD1-206ENST00000434755 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
NOD1-206ENST00000434755 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
NOD1-206ENST00000434755 RPGRIP1LQ68CZ1 1315 aa14.05□□□□□ -0.16
NOD1-206ENST00000434755 STK26Q9P289 416 aa14.05□□□□□ -0.16
NOD1-206ENST00000434755 ABCC10Q5T3U5 1492 aa14.05□□□□□ -0.16
NOD1-206ENST00000434755 CC2D1BQ5T0F9 858 aaKnown RBP14.04□□□□□ -0.16
NOD1-206ENST00000434755 CCDC136Q96JN2 1154 aa14.04□□□□□ -0.16
NOD1-206ENST00000434755 DHX29Q7Z478 1369 aaKnown RBP14.04□□□□□ -0.16
NOD1-206ENST00000434755 SOX12O15370 315 aa14.03□□□□□ -0.16
NOD1-206ENST00000434755 KDM5BQ9UGL1 1544 aa14.03□□□□□ -0.16
NOD1-206ENST00000434755 RAPGEF3O95398 923 aa14.03□□□□□ -0.16
NOD1-206ENST00000434755 DUOX2Q9NRD8 1548 aa14.03□□□□□ -0.16
NOD1-206ENST00000434755 ERBINQ96RT1 1412 aa14.02□□□□□ -0.16
NOD1-206ENST00000434755 HDGFL2Q7Z4V5 671 aaPredicted RBP14.02□□□□□ -0.17
NOD1-206ENST00000434755 KTN1Q86UP2 1357 aaKnown RBP14.01□□□□□ -0.17
NOD1-206ENST00000434755 SRPK2P78362 688 aaKnown RBP14□□□□□ -0.17
NOD1-206ENST00000434755 NUTM2DQ5VT03 806 aaPredicted RBP14□□□□□ -0.17
NOD1-206ENST00000434755 NUDCQ9Y266 331 aa14□□□□□ -0.17
NOD1-206ENST00000434755 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
NOD1-206ENST00000434755 PNNQ9H307 717 aaKnown RBP14□□□□□ -0.17
NOD1-206ENST00000434755 CFAP74Q9C0B2 1584 aa13.99□□□□□ -0.17
NOD1-206ENST00000434755 ANKRD30BQ9BXX2 1392 aa13.99□□□□□ -0.17
NOD1-206ENST00000434755 NEO1Q92859 1461 aa13.99□□□□□ -0.17
NOD1-206ENST00000434755 USP47Q96K76 1375 aa13.99□□□□□ -0.17
NOD1-206ENST00000434755 TERF2IPQ9NYB0 399 aa13.97□□□□□ -0.17
NOD1-206ENST00000434755 SYCP2Q9BX26 1530 aa13.96□□□□□ -0.17
NOD1-206ENST00000434755 THEMISQ8N1K5 641 aaPredicted RBP13.95□□□□□ -0.18
NOD1-206ENST00000434755 A2MP01023 1474 aa13.94□□□□□ -0.18
NOD1-206ENST00000434755 CCDC7Q96M83 1385 aa13.94□□□□□ -0.18
NOD1-206ENST00000434755 DNMT1P26358 1616 aaKnown RBP13.94□□□□□ -0.18
NOD1-206ENST00000434755 EVC2Q86UK5 1308 aa13.94□□□□□ -0.18
NOD1-206ENST00000434755 CNTLNQ9NXG0 1405 aa13.94□□□□□ -0.18
NOD1-206ENST00000434755 ADGRL2O95490 1459 aa13.94□□□□□ -0.18
NOD1-206ENST00000434755 CLASP1Q7Z460 1538 aa13.94□□□□□ -0.18
NOD1-206ENST00000434755 U2SURPO15042 1029 aaKnown RBP13.93□□□□□ -0.18
NOD1-206ENST00000434755 LAS1LQ9Y4W2 734 aaKnown RBP13.93□□□□□ -0.18
NOD1-206ENST00000434755 SUPT16HQ9Y5B9 1047 aaKnown RBP13.93□□□□□ -0.18
NOD1-206ENST00000434755 MAPKBP1O60336 1514 aa13.93□□□□□ -0.18
NOD1-206ENST00000434755 ANP32AP39687 249 aaKnown RBP13.92□□□□□ -0.18
NOD1-206ENST00000434755 ARHGEF5Q12774 1597 aa13.91□□□□□ -0.18
NOD1-206ENST00000434755 NLRP13Q86W25 1043 aa13.91□□□□□ -0.18
NOD1-206ENST00000434755 ARXQ96QS3 562 aa13.91□□□□□ -0.18
NOD1-206ENST00000434755 RPRD2Q5VT52 1461 aaKnown RBP13.9□□□□□ -0.18
NOD1-206ENST00000434755 PPP4R2Q9NY27 417 aa13.9□□□□□ -0.18
NOD1-206ENST00000434755 PRKRIP1Q9H875 184 aaPredicted RBP13.9□□□□□ -0.18
NOD1-206ENST00000434755 ARAP3Q8WWN8 1544 aa13.89□□□□□ -0.19
NOD1-206ENST00000434755 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
NOD1-206ENST00000434755 MORC1Q86VD1 984 aa13.89□□□□□ -0.19
NOD1-206ENST00000434755 MYO5CQ9NQX4 1742 aa13.89□□□□□ -0.19
NOD1-206ENST00000434755 WASHC2AQ641Q2 1341 aa13.88□□□□□ -0.19
NOD1-206ENST00000434755 ST20-MTHFSA0A0A6YYL1 179 aa13.88□□□□□ -0.19
NOD1-206ENST00000434755 MYBBP1AQ9BQG0 1328 aaKnown RBP13.88□□□□□ -0.19
NOD1-206ENST00000434755 CENPJQ9HC77 1338 aaPredicted RBP13.88□□□□□ -0.19
NOD1-206ENST00000434755 TRAPPC8Q9Y2L5 1435 aa13.88□□□□□ -0.19
NOD1-206ENST00000434755 NUTM2FA1L443 756 aa13.87□□□□□ -0.19
NOD1-206ENST00000434755 TRAK1Q9UPV9 953 aa13.87□□□□□ -0.19
NOD1-206ENST00000434755 PTPRKQ15262 1439 aa13.86□□□□□ -0.19
NOD1-206ENST00000434755 MAPK8IP3Q9UPT6 1336 aa13.86□□□□□ -0.19
NOD1-206ENST00000434755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.85□□□□□ -0.19
NOD1-206ENST00000434755 ZCCHC11Q5TAX3 1644 aaKnown RBP13.85□□□□□ -0.19
NOD1-206ENST00000434755 HSP90AA1P07900 732 aaKnown RBP13.85□□□□□ -0.19
NOD1-206ENST00000434755 NGEFQ8N5V2 710 aa13.84□□□□□ -0.19
NOD1-206ENST00000434755 KIF7Q2M1P5 1343 aa13.84□□□□□ -0.19
NOD1-206ENST00000434755 SHROOM2Q13796 1616 aa13.83□□□□□ -0.19
NOD1-206ENST00000434755 ATP7AQ04656 1500 aa13.83□□□□□ -0.19
NOD1-206ENST00000434755 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.2
NOD1-206ENST00000434755 MAGI2Q86UL8 1455 aa13.83□□□□□ -0.2
NOD1-206ENST00000434755 ADCY10Q96PN6 1610 aa13.82□□□□□ -0.2
NOD1-206ENST00000434755 MAGI3Q5TCQ9 1506 aa13.82□□□□□ -0.2
NOD1-206ENST00000434755 ZBED9Q6R2W3 1325 aa13.82□□□□□ -0.2
NOD1-206ENST00000434755 TXNDC2Q86VQ3 553 aa13.82□□□□□ -0.2
NOD1-206ENST00000434755 FAM135AQ9P2D6 1515 aa13.82□□□□□ -0.2
NOD1-206ENST00000434755 ATP10AO60312 1499 aa13.81□□□□□ -0.2
NOD1-206ENST00000434755 ANKLE2Q86XL3 938 aa13.81□□□□□ -0.2
NOD1-206ENST00000434755 UPF2Q9HAU5 1272 aaKnown RBP13.81□□□□□ -0.2
NOD1-206ENST00000434755 GCC2Q8IWJ2 1684 aa13.8□□□□□ -0.2
NOD1-206ENST00000434755 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
NOD1-206ENST00000434755 PREX2Q70Z35 1606 aa13.8□□□□□ -0.2
NOD1-206ENST00000434755 CGNL1Q0VF96 1302 aa13.8□□□□□ -0.2
NOD1-206ENST00000434755 MS4A1P11836 297 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms