RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 ARHGEF12Q9NZN5 1544 aa23.58■■□□□ 1.37
SEMA3B-204ENST00000433753 ERICH6BQ5W0A0 696 aa23.58■■□□□ 1.37
SEMA3B-204ENST00000433753 MSH5O43196 834 aa23.57■■□□□ 1.36
SEMA3B-204ENST00000433753 ARHGAP5Q13017 1502 aa23.56■■□□□ 1.36
SEMA3B-204ENST00000433753 PREX2Q70Z35 1606 aa23.56■■□□□ 1.36
SEMA3B-204ENST00000433753 CCDC144AA2RUR9 1427 aa23.55■■□□□ 1.36
SEMA3B-204ENST00000433753 ERCC6L2Q5T890 1561 aa23.55■■□□□ 1.36
SEMA3B-204ENST00000433753 TTC37Q6PGP7 1564 aa23.55■■□□□ 1.36
SEMA3B-204ENST00000433753 RSPH4AQ5TD94 716 aa23.55■■□□□ 1.36
SEMA3B-204ENST00000433753 CHD1O14646 1710 aa23.54■■□□□ 1.36
SEMA3B-204ENST00000433753 NUDCQ9Y266 331 aa23.53■■□□□ 1.36
SEMA3B-204ENST00000433753 PLA2R1Q13018 1463 aa23.52■■□□□ 1.36
SEMA3B-204ENST00000433753 SALL2Q9Y467 1007 aaPredicted RBP23.52■■□□□ 1.36
SEMA3B-204ENST00000433753 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.52■■□□□ 1.36
SEMA3B-204ENST00000433753 SMG6Q86US8 1419 aaKnown RBP23.51■■□□□ 1.35
SEMA3B-204ENST00000433753 PLEKHH2Q8IVE3 1493 aa23.51■■□□□ 1.35
SEMA3B-204ENST00000433753 PRAG1Q86YV5 1406 aa23.49■■□□□ 1.35
SEMA3B-204ENST00000433753 MYBBP1AQ9BQG0 1328 aaKnown RBP23.47■■□□□ 1.35
SEMA3B-204ENST00000433753 A2MP01023 1474 aa23.44■■□□□ 1.34
SEMA3B-204ENST00000433753 RALBP1Q15311 655 aa23.44■■□□□ 1.34
SEMA3B-204ENST00000433753 CC2D1BQ5T0F9 858 aaKnown RBP23.42■■□□□ 1.34
SEMA3B-204ENST00000433753 TRPM1Q7Z4N2 1603 aa23.41■■□□□ 1.34
SEMA3B-204ENST00000433753 BRD4O60885 1362 aaPredicted RBP23.4■■□□□ 1.34
SEMA3B-204ENST00000433753 PER1O15534 1290 aaPredicted RBP23.4■■□□□ 1.34
SEMA3B-204ENST00000433753 LRPPRCP42704 1394 aaKnown RBP23.4■■□□□ 1.34
SEMA3B-204ENST00000433753 DISP3Q9P2K9 1392 aa23.4■■□□□ 1.34
SEMA3B-204ENST00000433753 TESK2Q96S53 571 aa23.39■■□□□ 1.34
SEMA3B-204ENST00000433753 FANCIQ9NVI1 1328 aa23.38■■□□□ 1.33
SEMA3B-204ENST00000433753 ABCC2Q92887 1545 aa23.38■■□□□ 1.33
SEMA3B-204ENST00000433753 RNF123Q5XPI4 1314 aa23.38■■□□□ 1.33
SEMA3B-204ENST00000433753 CCDC136Q96JN2 1154 aa23.37■■□□□ 1.33
SEMA3B-204ENST00000433753 UNC13BO14795 1591 aa23.37■■□□□ 1.33
SEMA3B-204ENST00000433753 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
SEMA3B-204ENST00000433753 PANK3Q9H999 370 aa23.36■■□□□ 1.33
SEMA3B-204ENST00000433753 MYO5CQ9NQX4 1742 aa23.36■■□□□ 1.33
SEMA3B-204ENST00000433753 KTN1Q86UP2 1357 aaKnown RBP23.36■■□□□ 1.33
SEMA3B-204ENST00000433753 EFCAB2Q5VUJ9 269 aa23.35■■□□□ 1.33
SEMA3B-204ENST00000433753 AFAP1Q8N556 730 aa23.35■■□□□ 1.33
SEMA3B-204ENST00000433753 MAST1Q9Y2H9 1570 aa23.35■■□□□ 1.33
SEMA3B-204ENST00000433753 NLRP13Q86W25 1043 aa23.35■■□□□ 1.33
SEMA3B-204ENST00000433753 E9PCH4 1651 aa23.35■■□□□ 1.33
SEMA3B-204ENST00000433753 TRAPPC8Q9Y2L5 1435 aa23.34■■□□□ 1.33
SEMA3B-204ENST00000433753 GPRASP1Q5JY77 1395 aa23.33■■□□□ 1.32
SEMA3B-204ENST00000433753 PARD3Q8TEW0 1356 aa23.33■■□□□ 1.32
SEMA3B-204ENST00000433753 PLCH2O75038 1416 aa23.32■■□□□ 1.32
SEMA3B-204ENST00000433753 IQGAP3Q86VI3 1631 aa23.31■■□□□ 1.32
SEMA3B-204ENST00000433753 DUOX2Q9NRD8 1548 aa23.3■■□□□ 1.32
SEMA3B-204ENST00000433753 CDCA7LQ96GN5 454 aa23.3■■□□□ 1.32
SEMA3B-204ENST00000433753 PLXNC1O60486 1568 aa23.29■■□□□ 1.32
SEMA3B-204ENST00000433753 ERBINQ96RT1 1412 aa23.28■■□□□ 1.32
SEMA3B-204ENST00000433753 COL17A1Q9UMD9 1497 aaPredicted RBP23.28■■□□□ 1.32
SEMA3B-204ENST00000433753 TMF1P82094 1093 aa23.27■■□□□ 1.32
SEMA3B-204ENST00000433753 SPAG9O60271 1321 aaKnown RBP23.26■■□□□ 1.31
SEMA3B-204ENST00000433753 PRDM15P57071 1507 aaPredicted RBP23.26■■□□□ 1.31
SEMA3B-204ENST00000433753 ZCCHC11Q5TAX3 1644 aaKnown RBP23.26■■□□□ 1.31
SEMA3B-204ENST00000433753 ERICH6Q7L0X2 663 aa23.24■■□□□ 1.31
SEMA3B-204ENST00000433753 EXOC6Q8TAG9 804 aa23.23■■□□□ 1.31
SEMA3B-204ENST00000433753 RCAN3Q9UKA8 241 aa23.23■■□□□ 1.31
SEMA3B-204ENST00000433753 RRP1P56182 461 aaKnown RBP23.23■■□□□ 1.31
SEMA3B-204ENST00000433753 MYT1LQ9UL68 1186 aa23.23■■□□□ 1.31
SEMA3B-204ENST00000433753 MAGI2Q86UL8 1455 aa23.21■■□□□ 1.31
SEMA3B-204ENST00000433753 ATP10AO60312 1499 aa23.21■■□□□ 1.31
SEMA3B-204ENST00000433753 ABCC1P33527 1531 aa23.2■■□□□ 1.3
SEMA3B-204ENST00000433753 PLIN1O60240 522 aa23.18■■□□□ 1.3
SEMA3B-204ENST00000433753 EIF2AK4Q9P2K8 1649 aaKnown RBP23.15■■□□□ 1.3
SEMA3B-204ENST00000433753 WASHC2CQ9Y4E1 1318 aa23.15■■□□□ 1.3
SEMA3B-204ENST00000433753 LAMC1P11047 1609 aa23.14■■□□□ 1.3
SEMA3B-204ENST00000433753 ADAMTS8Q9UP79 889 aa23.14■■□□□ 1.3
SEMA3B-204ENST00000433753 KIF3BO15066 747 aa23.14■■□□□ 1.29
SEMA3B-204ENST00000433753 KNSTRNQ9Y448 316 aa23.12■■□□□ 1.29
SEMA3B-204ENST00000433753 PDE3BQ13370 1112 aa23.11■■□□□ 1.29
SEMA3B-204ENST00000433753 CLASP1Q7Z460 1538 aa23.11■■□□□ 1.29
SEMA3B-204ENST00000433753 UHRF1BP1LA0JNW5 1464 aa23.11■■□□□ 1.29
SEMA3B-204ENST00000433753 WDR7Q9Y4E6 1490 aa23.09■■□□□ 1.29
SEMA3B-204ENST00000433753 PAK3O75914 559 aaPredicted RBP23.08■■□□□ 1.29
SEMA3B-204ENST00000433753 PPP2R1AP30153 589 aa23.08■■□□□ 1.29
SEMA3B-204ENST00000433753 ZFYVE16Q7Z3T8 1539 aa23.08■■□□□ 1.28
SEMA3B-204ENST00000433753 SCAPERQ9BY12 1400 aa23.07■■□□□ 1.28
SEMA3B-204ENST00000433753 MADDQ8WXG6 1647 aa23.07■■□□□ 1.28
SEMA3B-204ENST00000433753 AMER1Q5JTC6 1135 aaPredicted RBP23.06■■□□□ 1.28
SEMA3B-204ENST00000433753 RNF17Q9BXT8 1623 aaKnown RBP23.06■■□□□ 1.28
SEMA3B-204ENST00000433753 CFAP70Q5T0N1 1121 aa23.06■■□□□ 1.28
SEMA3B-204ENST00000433753 CLTCL1P53675 1640 aa23.05■■□□□ 1.28
SEMA3B-204ENST00000433753 BCL11AQ9H165 835 aa23.05■■□□□ 1.28
SEMA3B-204ENST00000433753 BLMP54132 1417 aaPredicted RBP23.05■■□□□ 1.28
SEMA3B-204ENST00000433753 RTEL1-TNFRSF6BF6WH68 1400 aa23.05■■□□□ 1.28
SEMA3B-204ENST00000433753 SKAP1Q86WV1 359 aa23.04■■□□□ 1.28
SEMA3B-204ENST00000433753 TRPM2O94759 1503 aa23.04■■□□□ 1.28
SEMA3B-204ENST00000433753 FANCAO15360 1455 aa23.04■■□□□ 1.28
SEMA3B-204ENST00000433753 PTPRTO14522 1441 aa23.03■■□□□ 1.28
SEMA3B-204ENST00000433753 UGGT1Q9NYU2 1555 aa23.02■■□□□ 1.28
SEMA3B-204ENST00000433753 NOP58Q9Y2X3 529 aaKnown RBP23.01■■□□□ 1.27
SEMA3B-204ENST00000433753 SCAF11Q99590 1463 aaKnown RBP23.01■■□□□ 1.27
SEMA3B-204ENST00000433753 WDR43Q15061 677 aaKnown RBP eCLIP23.01■■□□□ 1.278e-7■■□□□ 12.2
SEMA3B-204ENST00000433753 ADGRF5Q8IZF2 1346 aa23.01■■□□□ 1.27
SEMA3B-204ENST00000433753 SPHKAPQ2M3C7 1700 aa23.01■■□□□ 1.27
SEMA3B-204ENST00000433753 C20orf194Q5TEA3 1177 aa23.01■■□□□ 1.27
SEMA3B-204ENST00000433753 CRBNQ96SW2 442 aa23.01■■□□□ 1.27
SEMA3B-204ENST00000433753 KANK1Q14678 1352 aa23■■□□□ 1.27
SEMA3B-204ENST00000433753 IQGAP1P46940 1657 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms