RNA–Protein interactions for RNA: ENST00000433298.5

LRCH3-205, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-205ENST00000433298 GGT6Q6P531 493 aa12.58□□□□□ -0.4
LRCH3-205ENST00000433298 NEURL4Q96JN8 1562 aa12.58□□□□□ -0.4
LRCH3-205ENST00000433298 DNMT1P26358 1616 aaKnown RBP12.57□□□□□ -0.4
LRCH3-205ENST00000433298 VWDEQ8N2E2 1590 aa12.56□□□□□ -0.4
LRCH3-205ENST00000433298 ZBTB22O15209 634 aa12.56□□□□□ -0.4
LRCH3-205ENST00000433298 ITSN2Q9NZM3 1697 aa12.55□□□□□ -0.4
LRCH3-205ENST00000433298 CDC42BPBQ9Y5S2 1711 aa12.55□□□□□ -0.4
LRCH3-205ENST00000433298 A2ML1A8K2U0 1454 aa12.54□□□□□ -0.4
LRCH3-205ENST00000433298 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
LRCH3-205ENST00000433298 ZNF777Q9ULD5 760 aaPredicted RBP12.54□□□□□ -0.4
LRCH3-205ENST00000433298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.54□□□□□ -0.4
LRCH3-205ENST00000433298 ABCC1P33527 1531 aa12.53□□□□□ -0.4
LRCH3-205ENST00000433298 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
LRCH3-205ENST00000433298 TRIM52Q96A61 297 aa12.53□□□□□ -0.4
LRCH3-205ENST00000433298 STRCP1A6NGW2 1772 aa12.53□□□□□ -0.4
LRCH3-205ENST00000433298 ANKLE2Q86XL3 938 aa12.52□□□□□ -0.41
LRCH3-205ENST00000433298 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
LRCH3-205ENST00000433298 LRRC7Q96NW7 1537 aa12.52□□□□□ -0.41
LRCH3-205ENST00000433298 FBXO31Q5XUX0 539 aaPredicted RBP12.51□□□□□ -0.41
LRCH3-205ENST00000433298 CDK11AQ9UQ88 783 aaPredicted RBP12.51□□□□□ -0.41
LRCH3-205ENST00000433298 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
LRCH3-205ENST00000433298 RNF17Q9BXT8 1623 aaKnown RBP12.51□□□□□ -0.41
LRCH3-205ENST00000433298 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
LRCH3-205ENST00000433298 NPHP4O75161 1426 aaPredicted RBP12.5□□□□□ -0.41
LRCH3-205ENST00000433298 TROQ12816 1431 aaPredicted RBP12.49□□□□□ -0.41
LRCH3-205ENST00000433298 SPAG9O60271 1321 aaKnown RBP12.49□□□□□ -0.41
LRCH3-205ENST00000433298 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
LRCH3-205ENST00000433298 SAMD9LQ8IVG5 1584 aa12.48□□□□□ -0.41
LRCH3-205ENST00000433298 CLIP1P30622 1438 aa12.48□□□□□ -0.41
LRCH3-205ENST00000433298 TNRQ92752 1358 aa12.47□□□□□ -0.41
LRCH3-205ENST00000433298 HNRNPMP52272 730 aaKnown RBP eCLIP12.47□□□□□ -0.41
LRCH3-205ENST00000433298 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
LRCH3-205ENST00000433298 PREX2Q70Z35 1606 aa12.47□□□□□ -0.41
LRCH3-205ENST00000433298 IQGAP1P46940 1657 aa12.45□□□□□ -0.42
LRCH3-205ENST00000433298 SYCP2Q9BX26 1530 aa12.44□□□□□ -0.42
LRCH3-205ENST00000433298 A2MP01023 1474 aa12.44□□□□□ -0.42
LRCH3-205ENST00000433298 LRRIQ1Q96JM4 1722 aa12.42□□□□□ -0.42
LRCH3-205ENST00000433298 ATP7AQ04656 1500 aa12.42□□□□□ -0.42
LRCH3-205ENST00000433298 THEMISQ8N1K5 641 aaPredicted RBP12.42□□□□□ -0.42
LRCH3-205ENST00000433298 SYNMO15061 1565 aa12.42□□□□□ -0.42
LRCH3-205ENST00000433298 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.42
LRCH3-205ENST00000433298 PLXNC1O60486 1568 aa12.4□□□□□ -0.42
LRCH3-205ENST00000433298 UGGT1Q9NYU2 1555 aa12.4□□□□□ -0.42
LRCH3-205ENST00000433298 RBM33Q96EV2 1170 aaKnown RBP12.4□□□□□ -0.42
LRCH3-205ENST00000433298 FAM135AQ9P2D6 1515 aa12.4□□□□□ -0.42
LRCH3-205ENST00000433298 MEX3CQ5U5Q3 659 aaKnown RBP12.39□□□□□ -0.43
LRCH3-205ENST00000433298 MED14O60244 1454 aa12.39□□□□□ -0.43
LRCH3-205ENST00000433298 XIRP1Q702N8 1843 aaKnown RBP12.39□□□□□ -0.43
LRCH3-205ENST00000433298 SRCAPQ6ZRS2 3230 aa12.39□□□□□ -0.43
LRCH3-205ENST00000433298 ROBO1Q9Y6N7 1651 aa12.38□□□□□ -0.43
LRCH3-205ENST00000433298 DEPDC5O75140 1603 aa12.38□□□□□ -0.43
LRCH3-205ENST00000433298 FMN1Q68DA7 1419 aa12.37□□□□□ -0.43
LRCH3-205ENST00000433298 INO80Q9ULG1 1556 aaPredicted RBP12.36□□□□□ -0.43
LRCH3-205ENST00000433298 FAM135BQ49AJ0 1406 aa12.36□□□□□ -0.43
LRCH3-205ENST00000433298 PZPP20742 1482 aa12.34□□□□□ -0.43
LRCH3-205ENST00000433298 KIF3BO15066 747 aa12.34□□□□□ -0.43
LRCH3-205ENST00000433298 MIA2Q96PC5 1412 aa12.34□□□□□ -0.43
LRCH3-205ENST00000433298 WASHC2CQ9Y4E1 1318 aa12.34□□□□□ -0.43
LRCH3-205ENST00000433298 PHLPP1O60346 1717 aa12.34□□□□□ -0.43
LRCH3-205ENST00000433298 ZC3H13Q5T200 1668 aaKnown RBP12.32□□□□□ -0.44
LRCH3-205ENST00000433298 ADGBQ8N7X0 1667 aa12.32□□□□□ -0.44
LRCH3-205ENST00000433298 UBTFP17480 764 aaKnown RBP12.32□□□□□ -0.44
LRCH3-205ENST00000433298 RXRBP28702 533 aa12.32□□□□□ -0.44
LRCH3-205ENST00000433298 LRP6O75581 1613 aa12.32□□□□□ -0.44
LRCH3-205ENST00000433298 ARHGAP35Q9NRY4 1499 aa12.32□□□□□ -0.44
LRCH3-205ENST00000433298 ZNF772Q68DY9 489 aaPredicted RBP12.31□□□□□ -0.44
LRCH3-205ENST00000433298 NLRP1Q9C000 1473 aa12.31□□□□□ -0.44
LRCH3-205ENST00000433298 TMEM94Q12767 1356 aa12.3□□□□□ -0.44
LRCH3-205ENST00000433298 JCADQ9P266 1359 aa12.3□□□□□ -0.44
LRCH3-205ENST00000433298 POTEHQ6S545 545 aa12.3□□□□□ -0.44
LRCH3-205ENST00000433298 KDM5DQ9BY66 1539 aa12.3□□□□□ -0.44
LRCH3-205ENST00000433298 NUTM2BA6NNL0 878 aaPredicted RBP12.29□□□□□ -0.44
LRCH3-205ENST00000433298 NUTM2EB1AL46 878 aaPredicted RBP12.29□□□□□ -0.44
LRCH3-205ENST00000433298 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
LRCH3-205ENST00000433298 NUTM2AQ8IVF1 878 aaPredicted RBP12.29□□□□□ -0.44
LRCH3-205ENST00000433298 CFDP1Q9UEE9 299 aaPredicted RBP12.29□□□□□ -0.44
LRCH3-205ENST00000433298 GPATCH8Q9UKJ3 1502 aaKnown RBP12.28□□□□□ -0.44
LRCH3-205ENST00000433298 LTKP29376 864 aa12.28□□□□□ -0.44
LRCH3-205ENST00000433298 TXNDC2Q86VQ3 553 aa12.28□□□□□ -0.44
LRCH3-205ENST00000433298 PROSER2Q86WR7 435 aaPredicted RBP12.28□□□□□ -0.44
LRCH3-205ENST00000433298 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
LRCH3-205ENST00000433298 EEA1Q15075 1411 aa12.28□□□□□ -0.44
LRCH3-205ENST00000433298 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.45
LRCH3-205ENST00000433298 SETBP1Q9Y6X0 1596 aa12.26□□□□□ -0.45
LRCH3-205ENST00000433298 CFAP65Q6ZU64 1925 aaKnown RBP12.25□□□□□ -0.45
LRCH3-205ENST00000433298 DHX29Q7Z478 1369 aaKnown RBP12.25□□□□□ -0.45
LRCH3-205ENST00000433298 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
LRCH3-205ENST00000433298 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
LRCH3-205ENST00000433298 PLEKHH2Q8IVE3 1493 aa12.23□□□□□ -0.45
LRCH3-205ENST00000433298 KIAA1107Q9UPP5 1409 aa12.23□□□□□ -0.45
LRCH3-205ENST00000433298 SLAIN2Q9P270 581 aa12.23□□□□□ -0.45
LRCH3-205ENST00000433298 UBR1Q8IWV7 1749 aa12.23□□□□□ -0.45
LRCH3-205ENST00000433298 CCDC18Q5T9S5 1454 aa12.22□□□□□ -0.45
LRCH3-205ENST00000433298 RGS12O14924 1447 aa12.22□□□□□ -0.45
LRCH3-205ENST00000433298 CCNB3Q8WWL7 1395 aa12.22□□□□□ -0.45
LRCH3-205ENST00000433298 SLC26A8Q96RN1 970 aa12.22□□□□□ -0.45
LRCH3-205ENST00000433298 COL16A1Q07092 1604 aaPredicted RBP12.22□□□□□ -0.45
LRCH3-205ENST00000433298 LRRC9Q6ZRR7 1453 aa12.21□□□□□ -0.45
LRCH3-205ENST00000433298 AFF2P51816 1311 aa12.21□□□□□ -0.45
LRCH3-205ENST00000433298 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms