RNA–Protein interactions for RNA: ENST00000433027.5

RBM39-213, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-213ENST00000433027 DEPDC5O75140 1603 aa22.64■■□□□ 1.21
RBM39-213ENST00000433027 ATP10AO60312 1499 aa22.63■■□□□ 1.21
RBM39-213ENST00000433027 ARHGEF40Q8TER5 1519 aa22.62■■□□□ 1.21
RBM39-213ENST00000433027 TRIM52Q96A61 297 aa22.61■■□□□ 1.21
RBM39-213ENST00000433027 RNF17Q9BXT8 1623 aaKnown RBP22.6■■□□□ 1.21
RBM39-213ENST00000433027 AGLP35573 1532 aa22.6■■□□□ 1.21
RBM39-213ENST00000433027 IQGAP3Q86VI3 1631 aa22.59■■□□□ 1.21
RBM39-213ENST00000433027 NUP155O75694 1391 aa22.59■■□□□ 1.21
RBM39-213ENST00000433027 FAM135AQ9P2D6 1515 aa22.58■■□□□ 1.21
RBM39-213ENST00000433027 PRDM15P57071 1507 aaPredicted RBP22.57■■□□□ 1.2
RBM39-213ENST00000433027 MPHOSPH9Q99550 1183 aa22.57■■□□□ 1.2
RBM39-213ENST00000433027 KANK1Q14678 1352 aa22.57■■□□□ 1.2
RBM39-213ENST00000433027 YEATS2Q9ULM3 1422 aa22.57■■□□□ 1.2
RBM39-213ENST00000433027 PZPP20742 1482 aa22.56■■□□□ 1.2
RBM39-213ENST00000433027 PPP6R1Q9UPN7 881 aa22.56■■□□□ 1.2
RBM39-213ENST00000433027 VWDEQ8N2E2 1590 aa22.55■■□□□ 1.2
RBM39-213ENST00000433027 SLC4A1APQ9BWU0 796 aaKnown RBP22.54■■□□□ 1.2
RBM39-213ENST00000433027 KIF3BO15066 747 aa22.53■■□□□ 1.2
RBM39-213ENST00000433027 LMTK2Q8IWU2 1503 aa22.52■■□□□ 1.19
RBM39-213ENST00000433027 MROH1Q8NDA8 1641 aa22.49■■□□□ 1.19
RBM39-213ENST00000433027 TIMELESSQ9UNS1 1208 aa22.48■■□□□ 1.19
RBM39-213ENST00000433027 ZC3H13Q5T200 1668 aaKnown RBP22.47■■□□□ 1.19
RBM39-213ENST00000433027 TET3O43151 1660 aa22.46■■□□□ 1.19
RBM39-213ENST00000433027 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
RBM39-213ENST00000433027 ANKRD30BQ9BXX2 1392 aa22.43■■□□□ 1.18
RBM39-213ENST00000433027 PKD2Q13563 968 aa22.42■■□□□ 1.18
RBM39-213ENST00000433027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.41■■□□□ 1.187e-22■■□□□ 11.6
RBM39-213ENST00000433027 ARHGAP31Q2M1Z3 1444 aa22.39■■□□□ 1.17
RBM39-213ENST00000433027 ABCC3O15438 1527 aa22.38■■□□□ 1.17
RBM39-213ENST00000433027 EFCAB6Q5THR3 1501 aa22.38■■□□□ 1.17
RBM39-213ENST00000433027 GGT6Q6P531 493 aa22.36■■□□□ 1.17
RBM39-213ENST00000433027 WASHC2CQ9Y4E1 1318 aa22.35■■□□□ 1.17
RBM39-213ENST00000433027 E9PCH4 1651 aa22.33■■□□□ 1.17
RBM39-213ENST00000433027 PTPRTO14522 1441 aa22.33■■□□□ 1.17
RBM39-213ENST00000433027 CNTLNQ9NXG0 1405 aa22.32■■□□□ 1.16
RBM39-213ENST00000433027 CEP152O94986 1710 aa22.31■■□□□ 1.16
RBM39-213ENST00000433027 CAMSAP1Q5T5Y3 1602 aa22.31■■□□□ 1.16
RBM39-213ENST00000433027 TRPM2O94759 1503 aa22.3■■□□□ 1.16
RBM39-213ENST00000433027 SIGLEC1Q9BZZ2 1709 aa22.28■■□□□ 1.16
RBM39-213ENST00000433027 CCDC144AA2RUR9 1427 aa22.28■■□□□ 1.16
RBM39-213ENST00000433027 SPHKAPQ2M3C7 1700 aa22.28■■□□□ 1.16
RBM39-213ENST00000433027 NEURL4Q96JN8 1562 aa22.27■■□□□ 1.16
RBM39-213ENST00000433027 NPATQ14207 1427 aa22.26■■□□□ 1.15
RBM39-213ENST00000433027 PLA2R1Q13018 1463 aa22.25■■□□□ 1.15
RBM39-213ENST00000433027 MROH2AA6NES4 1674 aa22.25■■□□□ 1.15
RBM39-213ENST00000433027 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
RBM39-213ENST00000433027 FOXD1Q16676 465 aa22.24■■□□□ 1.15
RBM39-213ENST00000433027 ESF1Q9H501 851 aaKnown RBP22.24■■□□□ 1.15
RBM39-213ENST00000433027 ARID4BQ4LE39 1312 aaPredicted RBP22.24■■□□□ 1.15
RBM39-213ENST00000433027 SIN3AQ96ST3 1273 aa22.23■■□□□ 1.15
RBM39-213ENST00000433027 NOS1P29475 1434 aa22.23■■□□□ 1.15
RBM39-213ENST00000433027 STAC3Q96MF2 364 aa22.2■■□□□ 1.14
RBM39-213ENST00000433027 NEUROD1Q13562 356 aa22.19■■□□□ 1.14
RBM39-213ENST00000433027 CLTCQ00610 1675 aaKnown RBP22.18■■□□□ 1.14
RBM39-213ENST00000433027 SLC52A1Q9NWF4 448 aa22.17■■□□□ 1.14
RBM39-213ENST00000433027 SPATA31D1Q6ZQQ2 1576 aa22.15■■□□□ 1.14
RBM39-213ENST00000433027 PREX1Q8TCU6 1659 aa22.14■■□□□ 1.14
RBM39-213ENST00000433027 ZMYM3Q14202 1370 aa22.13■■□□□ 1.13
RBM39-213ENST00000433027 ERVK-7P63135 1459 aa22.13■■□□□ 1.13
RBM39-213ENST00000433027 PIK3C2BO00750 1634 aa22.13■■□□□ 1.13
RBM39-213ENST00000433027 FER1L4A9Z1Z3 1794 aa22.12■■□□□ 1.13
RBM39-213ENST00000433027 MLECQ14165 292 aa22.12■■□□□ 1.13
RBM39-213ENST00000433027 CLTCL1P53675 1640 aa22.11■■□□□ 1.13
RBM39-213ENST00000433027 PPP1R15AO75807 674 aaPredicted RBP22.11■■□□□ 1.13
RBM39-213ENST00000433027 SPATA31E1Q6ZUB1 1445 aa22.11■■□□□ 1.13
RBM39-213ENST00000433027 KIF1BO60333 1816 aa22.1■■□□□ 1.13
RBM39-213ENST00000433027 SYNMO15061 1565 aa22.08■■□□□ 1.13
RBM39-213ENST00000433027 ADAMTSL3P82987 1691 aa22.08■■□□□ 1.13
RBM39-213ENST00000433027 L3MBTL2Q969R5 705 aa22.07■■□□□ 1.12
RBM39-213ENST00000433027 ADGRB3O60242 1522 aa22.05■■□□□ 1.12
RBM39-213ENST00000433027 UHRF1BP1Q6BDS2 1440 aa22.05■■□□□ 1.12
RBM39-213ENST00000433027 RPGRIP1LQ68CZ1 1315 aa22.05■■□□□ 1.12
RBM39-213ENST00000433027 KDM5AP29375 1690 aaKnown RBP22.04■■□□□ 1.12
RBM39-213ENST00000433027 CFAP65Q6ZU64 1925 aaKnown RBP22.04■■□□□ 1.12
RBM39-213ENST00000433027 NLRP1Q9C000 1473 aa22.02■■□□□ 1.12
RBM39-213ENST00000433027 C3P01024 1663 aa22.01■■□□□ 1.11
RBM39-213ENST00000433027 TNRQ92752 1358 aa21.99■■□□□ 1.11
RBM39-213ENST00000433027 MADDQ8WXG6 1647 aa21.99■■□□□ 1.11
RBM39-213ENST00000433027 MYOM2P54296 1465 aa21.97■■□□□ 1.11
RBM39-213ENST00000433027 UGGT1Q9NYU2 1555 aa21.97■■□□□ 1.11
RBM39-213ENST00000433027 IDI1Q13907 227 aa21.97■■□□□ 1.11
RBM39-213ENST00000433027 FBXO31Q5XUX0 539 aaPredicted RBP21.96■■□□□ 1.11
RBM39-213ENST00000433027 TMEM131LA2VDJ0 1609 aa21.95■■□□□ 1.1
RBM39-213ENST00000433027 SETD1BQ9UPS6 1966 aaKnown RBP21.94■■□□□ 1.1
RBM39-213ENST00000433027 DCAF11Q8TEB1 546 aa21.94■■□□□ 1.1
RBM39-213ENST00000433027 ZFYVE9O95405 1425 aa21.94■■□□□ 1.1
RBM39-213ENST00000433027 RIMS1Q86UR5 1692 aaKnown RBP21.94■■□□□ 1.1
RBM39-213ENST00000433027 IFT172Q9UG01 1749 aa21.93■■□□□ 1.1
RBM39-213ENST00000433027 PRAG1Q86YV5 1406 aa21.92■■□□□ 1.1
RBM39-213ENST00000433027 RGL3Q3MIN7 710 aa21.92■■□□□ 1.1
RBM39-213ENST00000433027 NRXN1Q9ULB1 1477 aa21.9■■□□□ 1.1
RBM39-213ENST00000433027 KDM4FA0A1W2PPD8 638 aa21.9■■□□□ 1.1
RBM39-213ENST00000433027 RALGAPBQ86X10 1494 aa21.9■■□□□ 1.1
RBM39-213ENST00000433027 PPLO60437 1756 aa21.89■■□□□ 1.1
RBM39-213ENST00000433027 HDGFP51858 240 aaKnown RBP21.89■■□□□ 1.09
RBM39-213ENST00000433027 VGFO15240 615 aaPredicted RBP21.88■■□□□ 1.09
RBM39-213ENST00000433027 KIAA1210Q9ULL0 1709 aa21.88■■□□□ 1.09
RBM39-213ENST00000433027 A2ML1A8K2U0 1454 aa21.88■■□□□ 1.09
RBM39-213ENST00000433027 ZNF326Q5BKZ1 582 aaKnown RBP21.87■■□□□ 1.09
RBM39-213ENST00000433027 STAG3Q9UJ98 1225 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms