RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.54□□□□□ -1.36
UBE4A-202ENST00000431736 KIAA1107Q9UPP5 1409 aa6.54□□□□□ -1.36
UBE4A-202ENST00000431736 EVA1CP58658 441 aa6.54□□□□□ -1.36
UBE4A-202ENST00000431736 PAK3O75914 559 aaPredicted RBP6.54□□□□□ -1.36
UBE4A-202ENST00000431736 FBXO31Q5XUX0 539 aaPredicted RBP6.54□□□□□ -1.36
UBE4A-202ENST00000431736 RGL3Q3MIN7 710 aa6.54□□□□□ -1.36
UBE4A-202ENST00000431736 ARHGEF40Q8TER5 1519 aa6.53□□□□□ -1.36
UBE4A-202ENST00000431736 STK26Q9P289 416 aa6.53□□□□□ -1.36
UBE4A-202ENST00000431736 PPP1R1BQ9UD71 204 aaPredicted RBP6.53□□□□□ -1.36
UBE4A-202ENST00000431736 PTPRTO14522 1441 aa6.53□□□□□ -1.36
UBE4A-202ENST00000431736 NPATQ14207 1427 aa6.53□□□□□ -1.36
UBE4A-202ENST00000431736 VPS8Q8N3P4 1428 aa6.53□□□□□ -1.36
UBE4A-202ENST00000431736 NPHP4O75161 1426 aaPredicted RBP6.52□□□□□ -1.37
UBE4A-202ENST00000431736 LRPPRCP42704 1394 aaKnown RBP6.52□□□□□ -1.37
UBE4A-202ENST00000431736 RXRBP28702 533 aa6.52□□□□□ -1.37
UBE4A-202ENST00000431736 NGDNQ8NEJ9 315 aaKnown RBP6.52□□□□□ -1.37
UBE4A-202ENST00000431736 ABCA9Q8IUA7 1624 aa6.52□□□□□ -1.37
UBE4A-202ENST00000431736 ZNF644Q9H582 1327 aaPredicted RBP6.52□□□□□ -1.37
UBE4A-202ENST00000431736 ZRANB1Q9UGI0 708 aa6.52□□□□□ -1.37
UBE4A-202ENST00000431736 KIF13AQ9H1H9 1805 aa6.52□□□□□ -1.37
UBE4A-202ENST00000431736 MAP3K4Q9Y6R4 1608 aa6.52□□□□□ -1.37
UBE4A-202ENST00000431736 HSPA1LP34931 641 aa6.51□□□□□ -1.37
UBE4A-202ENST00000431736 LRRC59Q96AG4 307 aaKnown RBP6.51□□□□□ -1.37
UBE4A-202ENST00000431736 CSB-PGBD3P0DP91 1061 aa6.51□□□□□ -1.37
UBE4A-202ENST00000431736 NCOA2Q15596 1464 aa6.51□□□□□ -1.37
UBE4A-202ENST00000431736 ADAMTS2O95450 1211 aa6.51□□□□□ -1.37
UBE4A-202ENST00000431736 MYO5CQ9NQX4 1742 aa6.51□□□□□ -1.37
UBE4A-202ENST00000431736 MLH3Q9UHC1 1453 aa6.51□□□□□ -1.37
UBE4A-202ENST00000431736 KCNA6P17658 529 aa6.51□□□□□ -1.37
UBE4A-202ENST00000431736 HMGB2P26583 209 aaKnown RBP6.51□□□□□ -1.37
UBE4A-202ENST00000431736 POLR3GLQ9BT43 218 aa6.5□□□□□ -1.37
UBE4A-202ENST00000431736 MIA2Q96PC5 1412 aa6.5□□□□□ -1.37
UBE4A-202ENST00000431736 NPM2Q86SE8 214 aaKnown RBP6.5□□□□□ -1.37
UBE4A-202ENST00000431736 C8orf37Q96NL8 207 aa6.5□□□□□ -1.37
UBE4A-202ENST00000431736 RTEL1-TNFRSF6BF6WH68 1400 aa6.5□□□□□ -1.37
UBE4A-202ENST00000431736 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.5□□□□□ -1.37
UBE4A-202ENST00000431736 ESCO1Q5FWF5 840 aa6.5□□□□□ -1.37
UBE4A-202ENST00000431736 MADDQ8WXG6 1647 aa6.49□□□□□ -1.37
UBE4A-202ENST00000431736 COL17A1Q9UMD9 1497 aaPredicted RBP6.49□□□□□ -1.37
UBE4A-202ENST00000431736 C19orf44Q9H6X5 657 aa6.49□□□□□ -1.37
UBE4A-202ENST00000431736 NLRP1Q9C000 1473 aa6.49□□□□□ -1.37
UBE4A-202ENST00000431736 SYCP2Q9BX26 1530 aa6.49□□□□□ -1.37
UBE4A-202ENST00000431736 KDM2AQ9Y2K7 1162 aa6.49□□□□□ -1.37
UBE4A-202ENST00000431736 ATP7AQ04656 1500 aa6.49□□□□□ -1.37
UBE4A-202ENST00000431736 GPRASP1Q5JY77 1395 aa6.49□□□□□ -1.37
UBE4A-202ENST00000431736 A2ML1A8K2U0 1454 aa6.47□□□□□ -1.37
UBE4A-202ENST00000431736 SUPT6HQ7KZ85 1726 aaKnown RBP6.47□□□□□ -1.37
UBE4A-202ENST00000431736 ITSN2Q9NZM3 1697 aa6.47□□□□□ -1.37
UBE4A-202ENST00000431736 SLAIN2Q9P270 581 aa6.47□□□□□ -1.37
UBE4A-202ENST00000431736 NBPF8Q3BBV2 869 aa6.47□□□□□ -1.37
UBE4A-202ENST00000431736 NBPF14Q5TI25 921 aa6.47□□□□□ -1.37
UBE4A-202ENST00000431736 SAMD9Q5K651 1589 aa6.46□□□□□ -1.37
UBE4A-202ENST00000431736 NUTM2FA1L443 756 aa6.46□□□□□ -1.37
UBE4A-202ENST00000431736 SETD1BQ9UPS6 1966 aaKnown RBP6.46□□□□□ -1.37
UBE4A-202ENST00000431736 PDE3BQ13370 1112 aa6.46□□□□□ -1.37
UBE4A-202ENST00000431736 GPATCH8Q9UKJ3 1502 aaKnown RBP6.46□□□□□ -1.38
UBE4A-202ENST00000431736 EIF3AQ14152 1382 aaKnown RBP6.46□□□□□ -1.38
UBE4A-202ENST00000431736 CAMSAP2Q08AD1 1489 aa6.46□□□□□ -1.38
UBE4A-202ENST00000431736 BAG6P46379 1132 aa6.46□□□□□ -1.38
UBE4A-202ENST00000431736 SAFB2Q14151 953 aaKnown RBP eCLIP6.46□□□□□ -1.38
UBE4A-202ENST00000431736 AMOTL2Q9Y2J4 779 aa6.46□□□□□ -1.38
UBE4A-202ENST00000431736 ANKRD50Q9ULJ7 1429 aa6.45□□□□□ -1.38
UBE4A-202ENST00000431736 SLC24A1O60721 1099 aa6.45□□□□□ -1.38
UBE4A-202ENST00000431736 UGGT1Q9NYU2 1555 aa6.45□□□□□ -1.38
UBE4A-202ENST00000431736 FER1L4A9Z1Z3 1794 aa6.45□□□□□ -1.38
UBE4A-202ENST00000431736 SRPK2P78362 688 aaKnown RBP6.45□□□□□ -1.38
UBE4A-202ENST00000431736 KLHL34Q8N239 644 aa6.45□□□□□ -1.38
UBE4A-202ENST00000431736 AGLP35573 1532 aa6.45□□□□□ -1.38
UBE4A-202ENST00000431736 NPHP3Q7Z494 1330 aa6.45□□□□□ -1.38
UBE4A-202ENST00000431736 JCADQ9P266 1359 aa6.45□□□□□ -1.38
UBE4A-202ENST00000431736 NEFMP07197 916 aa6.44□□□□□ -1.38
UBE4A-202ENST00000431736 TRPC5Q9UL62 973 aaPredicted RBP6.44□□□□□ -1.38
UBE4A-202ENST00000431736 CPS1P31327 1500 aa6.44□□□□□ -1.38
UBE4A-202ENST00000431736 CAMSAP1Q5T5Y3 1602 aa6.44□□□□□ -1.38
UBE4A-202ENST00000431736 IDI1Q13907 227 aa6.44□□□□□ -1.38
UBE4A-202ENST00000431736 TTC37Q6PGP7 1564 aa6.43□□□□□ -1.38
UBE4A-202ENST00000431736 SCAF11Q99590 1463 aaKnown RBP6.43□□□□□ -1.38
UBE4A-202ENST00000431736 TBX22Q9Y458 520 aa6.43□□□□□ -1.38
UBE4A-202ENST00000431736 SPATA31A6Q5VVP1 1343 aa6.43□□□□□ -1.38
UBE4A-202ENST00000431736 RPGRIP1LQ68CZ1 1315 aa6.43□□□□□ -1.38
UBE4A-202ENST00000431736 TMEM94Q12767 1356 aa6.43□□□□□ -1.38
UBE4A-202ENST00000431736 DHX57Q6P158 1386 aaKnown RBP6.43□□□□□ -1.38
UBE4A-202ENST00000431736 NCOA1Q15788 1441 aa6.43□□□□□ -1.38
UBE4A-202ENST00000431736 RPRD2Q5VT52 1461 aaKnown RBP6.43□□□□□ -1.38
UBE4A-202ENST00000431736 ZMYM4Q5VZL5 1548 aa6.43□□□□□ -1.38
UBE4A-202ENST00000431736 QTRT2Q9H974 415 aaKnown RBP6.43□□□□□ -1.38
UBE4A-202ENST00000431736 USP21Q9UK80 565 aa6.43□□□□□ -1.38
UBE4A-202ENST00000431736 LRRC9Q6ZRR7 1453 aa6.43□□□□□ -1.38
UBE4A-202ENST00000431736 KDM5DQ9BY66 1539 aa6.43□□□□□ -1.38
UBE4A-202ENST00000431736 MSH5O43196 834 aa6.42□□□□□ -1.38
UBE4A-202ENST00000431736 DUOX2Q9NRD8 1548 aa6.42□□□□□ -1.38
UBE4A-202ENST00000431736 BCORL1Q5H9F3 1711 aa6.42□□□□□ -1.38
UBE4A-202ENST00000431736 KANK4Q5T7N3 995 aaPredicted RBP6.42□□□□□ -1.38
UBE4A-202ENST00000431736 SHANK2Q9UPX8 1470 aa6.42□□□□□ -1.38
UBE4A-202ENST00000431736 RBM33Q96EV2 1170 aaKnown RBP6.42□□□□□ -1.38
UBE4A-202ENST00000431736 PRDM11Q9NQV5 511 aa6.42□□□□□ -1.38
UBE4A-202ENST00000431736 RIMS2Q9UQ26 1411 aa6.42□□□□□ -1.38
UBE4A-202ENST00000431736 CCDC144AA2RUR9 1427 aa6.41□□□□□ -1.38
UBE4A-202ENST00000431736 RBM6P78332 1123 aaKnown RBP6.41□□□□□ -1.38
UBE4A-202ENST00000431736 ABCC1P33527 1531 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms