RNA–Protein interactions for RNA: ENST00000431387.8

NF1-204, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-204ENST00000431387 ARHGEF5Q12774 1597 aa18.34■□□□□ 0.53
NF1-204ENST00000431387 ST20-MTHFSA0A0A6YYL1 179 aa18.33■□□□□ 0.52
NF1-204ENST00000431387 ROCK2O75116 1388 aaKnown RBP18.33■□□□□ 0.52
NF1-204ENST00000431387 SMG6Q86US8 1419 aaKnown RBP18.32■□□□□ 0.52
NF1-204ENST00000431387 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
NF1-204ENST00000431387 SAMD9LQ8IVG5 1584 aa18.31■□□□□ 0.52
NF1-204ENST00000431387 CCDC141Q6ZP82 1450 aa18.3■□□□□ 0.52
NF1-204ENST00000431387 PNISRQ8TF01 805 aaKnown RBP18.3■□□□□ 0.52
NF1-204ENST00000431387 ANP32AP39687 249 aaKnown RBP18.29■□□□□ 0.52
NF1-204ENST00000431387 IPO9Q96P70 1041 aaKnown RBP18.29■□□□□ 0.52
NF1-204ENST00000431387 TMC1Q8TDI8 760 aa18.28■□□□□ 0.52
NF1-204ENST00000431387 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
NF1-204ENST00000431387 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
NF1-204ENST00000431387 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
NF1-204ENST00000431387 NUDCQ9Y266 331 aa18.28■□□□□ 0.52
NF1-204ENST00000431387 FAM135AQ9P2D6 1515 aa18.28■□□□□ 0.52
NF1-204ENST00000431387 CDC42BPBQ9Y5S2 1711 aa18.28■□□□□ 0.52
NF1-204ENST00000431387 SALL2Q9Y467 1007 aaPredicted RBP18.27■□□□□ 0.52
NF1-204ENST00000431387 ZBTB47Q9UFB7 747 aaPredicted RBP18.27■□□□□ 0.51
NF1-204ENST00000431387 PREX2Q70Z35 1606 aa18.26■□□□□ 0.51
NF1-204ENST00000431387 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
NF1-204ENST00000431387 RSPH4AQ5TD94 716 aa18.24■□□□□ 0.51
NF1-204ENST00000431387 SYCP2Q9BX26 1530 aa18.22■□□□□ 0.51
NF1-204ENST00000431387 CCDC144AA2RUR9 1427 aa18.22■□□□□ 0.51
NF1-204ENST00000431387 RNF123Q5XPI4 1314 aa18.22■□□□□ 0.51
NF1-204ENST00000431387 RGL3Q3MIN7 710 aa18.21■□□□□ 0.51
NF1-204ENST00000431387 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.51
NF1-204ENST00000431387 PRAG1Q86YV5 1406 aa18.21■□□□□ 0.51
NF1-204ENST00000431387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
NF1-204ENST00000431387 TTC37Q6PGP7 1564 aa18.2■□□□□ 0.5
NF1-204ENST00000431387 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
NF1-204ENST00000431387 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
NF1-204ENST00000431387 RALBP1Q15311 655 aa18.2■□□□□ 0.5
NF1-204ENST00000431387 E9PCH4 1651 aa18.2■□□□□ 0.5
NF1-204ENST00000431387 BRD4O60885 1362 aaPredicted RBP18.19■□□□□ 0.5
NF1-204ENST00000431387 NBPF1Q3BBV0 1214 aa18.19■□□□□ 0.5
NF1-204ENST00000431387 LAS1LQ9Y4W2 734 aaKnown RBP18.19■□□□□ 0.5
NF1-204ENST00000431387 PLA2R1Q13018 1463 aa18.19■□□□□ 0.5
NF1-204ENST00000431387 TRPM1Q7Z4N2 1603 aa18.18■□□□□ 0.5
NF1-204ENST00000431387 KTN1Q86UP2 1357 aaKnown RBP18.18■□□□□ 0.5
NF1-204ENST00000431387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.17■□□□□ 0.5
NF1-204ENST00000431387 UNC13BO14795 1591 aa18.17■□□□□ 0.5
NF1-204ENST00000431387 MAST1Q9Y2H9 1570 aa18.16■□□□□ 0.5
NF1-204ENST00000431387 A2MP01023 1474 aa18.15■□□□□ 0.5
NF1-204ENST00000431387 CHD1O14646 1710 aa18.14■□□□□ 0.49
NF1-204ENST00000431387 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.49
NF1-204ENST00000431387 GPRASP1Q5JY77 1395 aa18.12■□□□□ 0.49
NF1-204ENST00000431387 PARD3Q8TEW0 1356 aa18.12■□□□□ 0.49
NF1-204ENST00000431387 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.11■□□□□ 0.49
NF1-204ENST00000431387 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
NF1-204ENST00000431387 NLRP13Q86W25 1043 aa18.11■□□□□ 0.49
NF1-204ENST00000431387 ERCC6L2Q5T890 1561 aa18.1■□□□□ 0.49
NF1-204ENST00000431387 IQGAP3Q86VI3 1631 aa18.1■□□□□ 0.49
NF1-204ENST00000431387 PLXNC1O60486 1568 aa18.1■□□□□ 0.49
NF1-204ENST00000431387 SHROOM2Q13796 1616 aa18.1■□□□□ 0.49
NF1-204ENST00000431387 NEFMP07197 916 aa18.1■□□□□ 0.49
NF1-204ENST00000431387 DISP3Q9P2K9 1392 aa18.09■□□□□ 0.49
NF1-204ENST00000431387 TESK2Q96S53 571 aa18.09■□□□□ 0.49
NF1-204ENST00000431387 MYO5CQ9NQX4 1742 aa18.09■□□□□ 0.49
NF1-204ENST00000431387 ABCC2Q92887 1545 aa18.09■□□□□ 0.49
NF1-204ENST00000431387 COL17A1Q9UMD9 1497 aaPredicted RBP18.08■□□□□ 0.49
NF1-204ENST00000431387 PRDM15P57071 1507 aaPredicted RBP18.08■□□□□ 0.48
NF1-204ENST00000431387 DUOX2Q9NRD8 1548 aa18.07■□□□□ 0.48
NF1-204ENST00000431387 EXOC6Q8TAG9 804 aa18.07■□□□□ 0.48
NF1-204ENST00000431387 LAMC1P11047 1609 aa18.06■□□□□ 0.48
NF1-204ENST00000431387 CC2D1BQ5T0F9 858 aaKnown RBP18.05■□□□□ 0.48
NF1-204ENST00000431387 SKAP1Q86WV1 359 aa18.05■□□□□ 0.48
NF1-204ENST00000431387 ERBINQ96RT1 1412 aa18.05■□□□□ 0.48
NF1-204ENST00000431387 ATP10AO60312 1499 aa18.04■□□□□ 0.48
NF1-204ENST00000431387 MAGI2Q86UL8 1455 aa18.04■□□□□ 0.48
NF1-204ENST00000431387 RRP1P56182 461 aaKnown RBP18.04■□□□□ 0.48
NF1-204ENST00000431387 PANK3Q9H999 370 aa18.04■□□□□ 0.48
NF1-204ENST00000431387 EIF2AK4Q9P2K8 1649 aaKnown RBP18.03■□□□□ 0.48
NF1-204ENST00000431387 PLCH2O75038 1416 aa18.03■□□□□ 0.48
NF1-204ENST00000431387 PDE4AP27815 886 aa18.02■□□□□ 0.48
NF1-204ENST00000431387 RCAN3Q9UKA8 241 aa18.02■□□□□ 0.48
NF1-204ENST00000431387 TMF1P82094 1093 aa18.01■□□□□ 0.47
NF1-204ENST00000431387 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
NF1-204ENST00000431387 WASHC2CQ9Y4E1 1318 aa18.01■□□□□ 0.47
NF1-204ENST00000431387 TRAPPC8Q9Y2L5 1435 aa17.99■□□□□ 0.47
NF1-204ENST00000431387 PDE3BQ13370 1112 aa17.99■□□□□ 0.47
NF1-204ENST00000431387 CDCA7LQ96GN5 454 aa17.99■□□□□ 0.47
NF1-204ENST00000431387 ZCCHC11Q5TAX3 1644 aaKnown RBP17.97■□□□□ 0.47
NF1-204ENST00000431387 ABCC1P33527 1531 aa17.97■□□□□ 0.47
NF1-204ENST00000431387 BRPF3Q9ULD4 1205 aa17.97■□□□□ 0.47
NF1-204ENST00000431387 RNF17Q9BXT8 1623 aaKnown RBP17.95■□□□□ 0.46
NF1-204ENST00000431387 BACH2Q9BYV9 841 aa17.95■□□□□ 0.46
NF1-204ENST00000431387 BLMP54132 1417 aaPredicted RBP17.95■□□□□ 0.46
NF1-204ENST00000431387 TCERG1O14776 1098 aaKnown RBP17.94■□□□□ 0.46
NF1-204ENST00000431387 SLC4A3P48751 1232 aa17.93■□□□□ 0.46
NF1-204ENST00000431387 PLIN1O60240 522 aa17.93■□□□□ 0.46
NF1-204ENST00000431387 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
NF1-204ENST00000431387 SPAG9O60271 1321 aaKnown RBP17.92■□□□□ 0.46
NF1-204ENST00000431387 INSRP06213 1382 aa17.92■□□□□ 0.46
NF1-204ENST00000431387 MADDQ8WXG6 1647 aa17.91■□□□□ 0.46
NF1-204ENST00000431387 UHRF1BP1LA0JNW5 1464 aa17.91■□□□□ 0.46
NF1-204ENST00000431387 WDR7Q9Y4E6 1490 aa17.91■□□□□ 0.46
NF1-204ENST00000431387 ZMYM4Q5VZL5 1548 aa17.9■□□□□ 0.46
NF1-204ENST00000431387 USP35Q9P2H5 1018 aa17.89■□□□□ 0.45
NF1-204ENST00000431387 TRPM2O94759 1503 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms