RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 FER1L4A9Z1Z3 1794 aa16.83■□□□□ 0.28
SPTLC3-202ENST00000431275 CNTLNQ9NXG0 1405 aa16.82■□□□□ 0.28
SPTLC3-202ENST00000431275 CEBPAP49715 358 aaPredicted RBP16.82■□□□□ 0.28
SPTLC3-202ENST00000431275 ANKRD50Q9ULJ7 1429 aa16.81■□□□□ 0.28
SPTLC3-202ENST00000431275 EIF2AK4Q9P2K8 1649 aaKnown RBP16.81■□□□□ 0.28
SPTLC3-202ENST00000431275 WASHC2CQ9Y4E1 1318 aa16.8■□□□□ 0.28
SPTLC3-202ENST00000431275 ZMYM3Q14202 1370 aa16.79■□□□□ 0.28
SPTLC3-202ENST00000431275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.282e-8■■■□□ 15.4
SPTLC3-202ENST00000431275 RNF17Q9BXT8 1623 aaKnown RBP16.78■□□□□ 0.28
SPTLC3-202ENST00000431275 CLTCQ00610 1675 aaKnown RBP16.76■□□□□ 0.27
SPTLC3-202ENST00000431275 MROH1Q8NDA8 1641 aa16.74■□□□□ 0.27
SPTLC3-202ENST00000431275 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
SPTLC3-202ENST00000431275 FAM135AQ9P2D6 1515 aa16.74■□□□□ 0.27
SPTLC3-202ENST00000431275 MROH2AA6NES4 1674 aa16.73■□□□□ 0.27
SPTLC3-202ENST00000431275 KANK1Q14678 1352 aa16.73■□□□□ 0.27
SPTLC3-202ENST00000431275 C3P01024 1663 aa16.72■□□□□ 0.27
SPTLC3-202ENST00000431275 NAIPQ13075 1403 aa16.72■□□□□ 0.27
SPTLC3-202ENST00000431275 ABCC3O15438 1527 aa16.71■□□□□ 0.27
SPTLC3-202ENST00000431275 PRDM15P57071 1507 aaPredicted RBP16.71■□□□□ 0.27
SPTLC3-202ENST00000431275 DEPDC5O75140 1603 aa16.71■□□□□ 0.27
SPTLC3-202ENST00000431275 HFM1A2PYH4 1435 aa16.7■□□□□ 0.26
SPTLC3-202ENST00000431275 FBXO31Q5XUX0 539 aaPredicted RBP16.69■□□□□ 0.26
SPTLC3-202ENST00000431275 ZC3H13Q5T200 1668 aaKnown RBP16.68■□□□□ 0.26
SPTLC3-202ENST00000431275 NPATQ14207 1427 aa16.67■□□□□ 0.26
SPTLC3-202ENST00000431275 VWDEQ8N2E2 1590 aa16.67■□□□□ 0.26
SPTLC3-202ENST00000431275 PZPP20742 1482 aa16.67■□□□□ 0.26
SPTLC3-202ENST00000431275 NUP155O75694 1391 aa16.66■□□□□ 0.26
SPTLC3-202ENST00000431275 CEP152O94986 1710 aa16.66■□□□□ 0.26
SPTLC3-202ENST00000431275 GCC2Q8IWJ2 1684 aa16.65■□□□□ 0.26
SPTLC3-202ENST00000431275 LMTK2Q8IWU2 1503 aa16.65■□□□□ 0.26
SPTLC3-202ENST00000431275 UNC13BO14795 1591 aa16.64■□□□□ 0.25
SPTLC3-202ENST00000431275 CAMSAP1Q5T5Y3 1602 aa16.63■□□□□ 0.25
SPTLC3-202ENST00000431275 ARHGAP31Q2M1Z3 1444 aa16.63■□□□□ 0.25
SPTLC3-202ENST00000431275 UHRF1BP1Q6BDS2 1440 aa16.62■□□□□ 0.25
SPTLC3-202ENST00000431275 TRIM52Q96A61 297 aa16.62■□□□□ 0.25
SPTLC3-202ENST00000431275 SETD1BQ9UPS6 1966 aaKnown RBP16.62■□□□□ 0.25
SPTLC3-202ENST00000431275 TNRQ92752 1358 aa16.62■□□□□ 0.25
SPTLC3-202ENST00000431275 SETD5Q9C0A6 1442 aa16.62■□□□□ 0.25
SPTLC3-202ENST00000431275 LMTK3Q96Q04 1460 aa16.61■□□□□ 0.25
SPTLC3-202ENST00000431275 HSPA2P54652 639 aa16.6■□□□□ 0.25
SPTLC3-202ENST00000431275 PREX1Q8TCU6 1659 aa16.59■□□□□ 0.25
SPTLC3-202ENST00000431275 ERVK-7P63135 1459 aa16.59■□□□□ 0.25
SPTLC3-202ENST00000431275 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
SPTLC3-202ENST00000431275 EFCAB6Q5THR3 1501 aa16.58■□□□□ 0.24
SPTLC3-202ENST00000431275 SPATA31D1Q6ZQQ2 1576 aa16.58■□□□□ 0.24
SPTLC3-202ENST00000431275 TET3O43151 1660 aa16.57■□□□□ 0.24
SPTLC3-202ENST00000431275 RPRD2Q5VT52 1461 aaKnown RBP16.55■□□□□ 0.24
SPTLC3-202ENST00000431275 RAB3GAP2Q9H2M9 1393 aa16.55■□□□□ 0.24
SPTLC3-202ENST00000431275 ACIN1Q9UKV3 1341 aaKnown RBP16.55■□□□□ 0.24
SPTLC3-202ENST00000431275 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
SPTLC3-202ENST00000431275 MYO3AQ8NEV4 1616 aa16.54■□□□□ 0.24
SPTLC3-202ENST00000431275 CFAP65Q6ZU64 1925 aaKnown RBP16.54■□□□□ 0.24
SPTLC3-202ENST00000431275 NOS1P29475 1434 aa16.53■□□□□ 0.24
SPTLC3-202ENST00000431275 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
SPTLC3-202ENST00000431275 A2ML1A8K2U0 1454 aa16.53■□□□□ 0.24
SPTLC3-202ENST00000431275 NLRP1Q9C000 1473 aa16.53■□□□□ 0.24
SPTLC3-202ENST00000431275 HRCP23327 699 aa16.52■□□□□ 0.24
SPTLC3-202ENST00000431275 CEP170BQ9Y4F5 1589 aaPredicted RBP16.51■□□□□ 0.23
SPTLC3-202ENST00000431275 E9PCH4 1651 aa16.51■□□□□ 0.23
SPTLC3-202ENST00000431275 PKD2Q13563 968 aa16.51■□□□□ 0.23
SPTLC3-202ENST00000431275 IDI1Q13907 227 aa16.51■□□□□ 0.23
SPTLC3-202ENST00000431275 SLC52A1Q9NWF4 448 aa16.51■□□□□ 0.23
SPTLC3-202ENST00000431275 THEMISQ8N1K5 641 aaPredicted RBP16.5■□□□□ 0.23
SPTLC3-202ENST00000431275 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
SPTLC3-202ENST00000431275 ZNF142P52746 1687 aaPredicted RBP16.49■□□□□ 0.23
SPTLC3-202ENST00000431275 SYNMO15061 1565 aa16.48■□□□□ 0.23
SPTLC3-202ENST00000431275 UGGT1Q9NYU2 1555 aa16.47■□□□□ 0.23
SPTLC3-202ENST00000431275 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
SPTLC3-202ENST00000431275 PTPRTO14522 1441 aa16.45■□□□□ 0.22
SPTLC3-202ENST00000431275 FOXD1Q16676 465 aa16.45■□□□□ 0.22
SPTLC3-202ENST00000431275 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
SPTLC3-202ENST00000431275 PLA2R1Q13018 1463 aa16.43■□□□□ 0.22
SPTLC3-202ENST00000431275 PIK3C2BO00750 1634 aa16.42■□□□□ 0.22
SPTLC3-202ENST00000431275 ANKLE2Q86XL3 938 aa16.42■□□□□ 0.22
SPTLC3-202ENST00000431275 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
SPTLC3-202ENST00000431275 CHGAP10645 457 aaKnown RBP16.41■□□□□ 0.22
SPTLC3-202ENST00000431275 UBR1Q8IWV7 1749 aa16.41■□□□□ 0.22
SPTLC3-202ENST00000431275 STRCQ7RTU9 1775 aa16.41■□□□□ 0.22
SPTLC3-202ENST00000431275 SPHKAPQ2M3C7 1700 aa16.39■□□□□ 0.21
SPTLC3-202ENST00000431275 TXNDC2Q86VQ3 553 aa16.38■□□□□ 0.21
SPTLC3-202ENST00000431275 ADGRB3O60242 1522 aa16.38■□□□□ 0.21
SPTLC3-202ENST00000431275 TRPM2O94759 1503 aa16.38■□□□□ 0.21
SPTLC3-202ENST00000431275 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
SPTLC3-202ENST00000431275 KDM5AP29375 1690 aaKnown RBP16.37■□□□□ 0.21
SPTLC3-202ENST00000431275 LTKP29376 864 aa16.37■□□□□ 0.21
SPTLC3-202ENST00000431275 EID1Q9Y6B2 187 aa16.37■□□□□ 0.21
SPTLC3-202ENST00000431275 ARHGAP23Q9P227 1491 aa16.36■□□□□ 0.21
SPTLC3-202ENST00000431275 SLIT1O75093 1534 aa16.36■□□□□ 0.21
SPTLC3-202ENST00000431275 TMEM131LA2VDJ0 1609 aa16.35■□□□□ 0.21
SPTLC3-202ENST00000431275 HDGFP51858 240 aaKnown RBP16.34■□□□□ 0.21
SPTLC3-202ENST00000431275 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
SPTLC3-202ENST00000431275 CCDC144AA2RUR9 1427 aa16.32■□□□□ 0.2
SPTLC3-202ENST00000431275 ZNF326Q5BKZ1 582 aaKnown RBP16.32■□□□□ 0.2
SPTLC3-202ENST00000431275 SCAF11Q99590 1463 aaKnown RBP16.32■□□□□ 0.2
SPTLC3-202ENST00000431275 PCGF6Q9BYE7 350 aa16.32■□□□□ 0.2
SPTLC3-202ENST00000431275 NEURL4Q96JN8 1562 aa16.31■□□□□ 0.2
SPTLC3-202ENST00000431275 MED14O60244 1454 aa16.31■□□□□ 0.2
SPTLC3-202ENST00000431275 NPHP4O75161 1426 aaPredicted RBP16.31■□□□□ 0.2
SPTLC3-202ENST00000431275 RIMS2Q9UQ26 1411 aa16.31■□□□□ 0.2
SPTLC3-202ENST00000431275 ANKRD30BQ9BXX2 1392 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms