RNA–Protein interactions for RNA: ENST00000429602.6

SIMC1-203, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-203ENST00000429602 B4GALNT3Q6L9W6 998 aa27.33■■□□□ 1.97
SIMC1-203ENST00000429602 TMC1Q8TDI8 760 aa27.31■■□□□ 1.96
SIMC1-203ENST00000429602 ARHGAP5Q13017 1502 aa27.31■■□□□ 1.96
SIMC1-203ENST00000429602 PNISRQ8TF01 805 aaKnown RBP27.3■■□□□ 1.96
SIMC1-203ENST00000429602 CCDC144AA2RUR9 1427 aa27.29■■□□□ 1.96
SIMC1-203ENST00000429602 TTC37Q6PGP7 1564 aa27.29■■□□□ 1.96
SIMC1-203ENST00000429602 SMG6Q86US8 1419 aaKnown RBP27.26■■□□□ 1.95
SIMC1-203ENST00000429602 NBPF1Q3BBV0 1214 aa27.25■■□□□ 1.95
SIMC1-203ENST00000429602 CHD1O14646 1710 aa27.25■■□□□ 1.95
SIMC1-203ENST00000429602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.25■■□□□ 1.95
SIMC1-203ENST00000429602 ERCC6L2Q5T890 1561 aa27.24■■□□□ 1.95
SIMC1-203ENST00000429602 NUDCQ9Y266 331 aa27.24■■□□□ 1.95
SIMC1-203ENST00000429602 PLA2R1Q13018 1463 aa27.23■■□□□ 1.95
SIMC1-203ENST00000429602 PRAG1Q86YV5 1406 aa27.23■■□□□ 1.95
SIMC1-203ENST00000429602 PLEKHH2Q8IVE3 1493 aa27.21■■□□□ 1.95
SIMC1-203ENST00000429602 MYBBP1AQ9BQG0 1328 aaKnown RBP27.18■■□□□ 1.94
SIMC1-203ENST00000429602 MSH5O43196 834 aa27.17■■□□□ 1.94
SIMC1-203ENST00000429602 A2MP01023 1474 aa27.16■■□□□ 1.94
SIMC1-203ENST00000429602 RALBP1Q15311 655 aa27.15■■□□□ 1.94
SIMC1-203ENST00000429602 ABCC2Q92887 1545 aa27.15■■□□□ 1.94
SIMC1-203ENST00000429602 SHROOM2Q13796 1616 aa27.15■■□□□ 1.94
SIMC1-203ENST00000429602 MAST1Q9Y2H9 1570 aa27.14■■□□□ 1.94
SIMC1-203ENST00000429602 UNC13BO14795 1591 aa27.14■■□□□ 1.94
SIMC1-203ENST00000429602 BRD4O60885 1362 aaPredicted RBP27.13■■□□□ 1.93
SIMC1-203ENST00000429602 TRPM1Q7Z4N2 1603 aa27.12■■□□□ 1.93
SIMC1-203ENST00000429602 LRPPRCP42704 1394 aaKnown RBP27.11■■□□□ 1.93
SIMC1-203ENST00000429602 KTN1Q86UP2 1357 aaKnown RBP27.09■■□□□ 1.93
SIMC1-203ENST00000429602 RNF123Q5XPI4 1314 aa27.09■■□□□ 1.93
SIMC1-203ENST00000429602 FANCIQ9NVI1 1328 aa27.09■■□□□ 1.93
SIMC1-203ENST00000429602 GPRASP1Q5JY77 1395 aa27.08■■□□□ 1.93
SIMC1-203ENST00000429602 MYO5CQ9NQX4 1742 aa27.08■■□□□ 1.93
SIMC1-203ENST00000429602 E9PCH4 1651 aa27.08■■□□□ 1.93
SIMC1-203ENST00000429602 PLXNC1O60486 1568 aa27.07■■□□□ 1.92
SIMC1-203ENST00000429602 TESK2Q96S53 571 aa27.06■■□□□ 1.92
SIMC1-203ENST00000429602 SALL2Q9Y467 1007 aaPredicted RBP27.06■■□□□ 1.92
SIMC1-203ENST00000429602 DISP3Q9P2K9 1392 aa27.06■■□□□ 1.92
SIMC1-203ENST00000429602 EFCAB2Q5VUJ9 269 aa27.05■■□□□ 1.92
SIMC1-203ENST00000429602 IQGAP3Q86VI3 1631 aa27.05■■□□□ 1.92
SIMC1-203ENST00000429602 DUOX2Q9NRD8 1548 aa27.05■■□□□ 1.92
SIMC1-203ENST00000429602 PER1O15534 1290 aaPredicted RBP27.05■■□□□ 1.92
SIMC1-203ENST00000429602 PLCH2O75038 1416 aa27.05■■□□□ 1.92
SIMC1-203ENST00000429602 NLRP13Q86W25 1043 aa27.04■■□□□ 1.92
SIMC1-203ENST00000429602 PARD3Q8TEW0 1356 aa27.04■■□□□ 1.92
SIMC1-203ENST00000429602 CC2D1BQ5T0F9 858 aaKnown RBP27.02■■□□□ 1.92
SIMC1-203ENST00000429602 TRAPPC8Q9Y2L5 1435 aa27.02■■□□□ 1.92
SIMC1-203ENST00000429602 ERBINQ96RT1 1412 aa27.01■■□□□ 1.91
SIMC1-203ENST00000429602 COL17A1Q9UMD9 1497 aaPredicted RBP27.01■■□□□ 1.91
SIMC1-203ENST00000429602 CCDC136Q96JN2 1154 aa27.01■■□□□ 1.91
SIMC1-203ENST00000429602 PRDM15P57071 1507 aaPredicted RBP26.98■■□□□ 1.91
SIMC1-203ENST00000429602 MAGI2Q86UL8 1455 aa26.98■■□□□ 1.91
SIMC1-203ENST00000429602 PANK3Q9H999 370 aa26.98■■□□□ 1.91
SIMC1-203ENST00000429602 AFAP1Q8N556 730 aa26.97■■□□□ 1.91
SIMC1-203ENST00000429602 ATP10AO60312 1499 aa26.97■■□□□ 1.91
SIMC1-203ENST00000429602 ZCCHC11Q5TAX3 1644 aaKnown RBP26.96■■□□□ 1.91
SIMC1-203ENST00000429602 TMF1P82094 1093 aa26.94■■□□□ 1.9
SIMC1-203ENST00000429602 SPAG9O60271 1321 aaKnown RBP26.93■■□□□ 1.9
SIMC1-203ENST00000429602 ABCC1P33527 1531 aa26.93■■□□□ 1.9
SIMC1-203ENST00000429602 LAMC1P11047 1609 aa26.9■■□□□ 1.9
SIMC1-203ENST00000429602 EIF2AK4Q9P2K8 1649 aaKnown RBP26.9■■□□□ 1.9
SIMC1-203ENST00000429602 RRP1P56182 461 aaKnown RBP26.87■■□□□ 1.89
SIMC1-203ENST00000429602 ERICH6Q7L0X2 663 aa26.87■■□□□ 1.89
SIMC1-203ENST00000429602 RCAN3Q9UKA8 241 aa26.87■■□□□ 1.89
SIMC1-203ENST00000429602 WASHC2CQ9Y4E1 1318 aa26.87■■□□□ 1.89
SIMC1-203ENST00000429602 UHRF1BP1LA0JNW5 1464 aa26.87■■□□□ 1.89
SIMC1-203ENST00000429602 CDCA7LQ96GN5 454 aa26.86■■□□□ 1.89
SIMC1-203ENST00000429602 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
SIMC1-203ENST00000429602 EXOC6Q8TAG9 804 aa26.82■■□□□ 1.88
SIMC1-203ENST00000429602 PDE3BQ13370 1112 aa26.8■■□□□ 1.88
SIMC1-203ENST00000429602 ZFYVE16Q7Z3T8 1539 aa26.79■■□□□ 1.88
SIMC1-203ENST00000429602 RNF17Q9BXT8 1623 aaKnown RBP26.79■■□□□ 1.88
SIMC1-203ENST00000429602 MYT1LQ9UL68 1186 aa26.79■■□□□ 1.88
SIMC1-203ENST00000429602 RTEL1-TNFRSF6BF6WH68 1400 aa26.77■■□□□ 1.88
SIMC1-203ENST00000429602 MADDQ8WXG6 1647 aa26.76■■□□□ 1.87
SIMC1-203ENST00000429602 WDR7Q9Y4E6 1490 aa26.75■■□□□ 1.87
SIMC1-203ENST00000429602 TRPM2O94759 1503 aa26.75■■□□□ 1.87
SIMC1-203ENST00000429602 KIF3BO15066 747 aa26.74■■□□□ 1.87
SIMC1-203ENST00000429602 KNSTRNQ9Y448 316 aa26.74■■□□□ 1.87
SIMC1-203ENST00000429602 BLMP54132 1417 aaPredicted RBP26.74■■□□□ 1.87
SIMC1-203ENST00000429602 PTPRTO14522 1441 aa26.73■■□□□ 1.87
SIMC1-203ENST00000429602 ADAMTS8Q9UP79 889 aa26.72■■□□□ 1.87
SIMC1-203ENST00000429602 CLTCL1P53675 1640 aa26.71■■□□□ 1.87
SIMC1-203ENST00000429602 FANCAO15360 1455 aa26.7■■□□□ 1.87
SIMC1-203ENST00000429602 PLIN1O60240 522 aa26.7■■□□□ 1.86
SIMC1-203ENST00000429602 SCAPERQ9BY12 1400 aa26.69■■□□□ 1.86
SIMC1-203ENST00000429602 SCAF11Q99590 1463 aaKnown RBP26.69■■□□□ 1.86
SIMC1-203ENST00000429602 PPP2R1AP30153 589 aa26.69■■□□□ 1.86
SIMC1-203ENST00000429602 AMER1Q5JTC6 1135 aaPredicted RBP26.69■■□□□ 1.86
SIMC1-203ENST00000429602 ARAP3Q8WWN8 1544 aa26.68■■□□□ 1.86
SIMC1-203ENST00000429602 KANK1Q14678 1352 aa26.68■■□□□ 1.86
SIMC1-203ENST00000429602 ATP7AQ04656 1500 aa26.67■■□□□ 1.86
SIMC1-203ENST00000429602 IQGAP1P46940 1657 aa26.66■■□□□ 1.86
SIMC1-203ENST00000429602 SPHKAPQ2M3C7 1700 aa26.66■■□□□ 1.86
SIMC1-203ENST00000429602 INSRP06213 1382 aa26.65■■□□□ 1.86
SIMC1-203ENST00000429602 CDCA8Q53HL2 280 aa26.65■■□□□ 1.86
SIMC1-203ENST00000429602 DEPDC5O75140 1603 aa26.63■■□□□ 1.85
SIMC1-203ENST00000429602 CEP152O94986 1710 aa26.63■■□□□ 1.85
SIMC1-203ENST00000429602 STAC3Q96MF2 364 aa26.63■■□□□ 1.85
SIMC1-203ENST00000429602 CFAP70Q5T0N1 1121 aa26.62■■□□□ 1.85
SIMC1-203ENST00000429602 ADGRL1O94910 1474 aa26.62■■□□□ 1.85
SIMC1-203ENST00000429602 WDR43Q15061 677 aaKnown RBP eCLIP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms