RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 CC2D2AQ9P2K1 1620 aa17.77■□□□□ 0.43
SGMS1-203ENST00000429490 HSP90AA1P07900 732 aaKnown RBP17.77■□□□□ 0.43
SGMS1-203ENST00000429490 GZF1Q9H116 711 aaPredicted RBP17.76■□□□□ 0.43
SGMS1-203ENST00000429490 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
SGMS1-203ENST00000429490 FAM161AQ3B820 660 aa17.75■□□□□ 0.43
SGMS1-203ENST00000429490 CDCA8Q53HL2 280 aa17.75■□□□□ 0.43
SGMS1-203ENST00000429490 ARID4BQ4LE39 1312 aaPredicted RBP17.75■□□□□ 0.43
SGMS1-203ENST00000429490 CENPQQ7L2Z9 268 aaPredicted RBP17.74■□□□□ 0.43
SGMS1-203ENST00000429490 COG6Q9Y2V7 657 aa17.73■□□□□ 0.43
SGMS1-203ENST00000429490 FRAT2O75474 233 aaPredicted RBP17.72■□□□□ 0.43
SGMS1-203ENST00000429490 DHX29Q7Z478 1369 aaKnown RBP17.72■□□□□ 0.43
SGMS1-203ENST00000429490 UGGT2Q9NYU1 1516 aa17.71■□□□□ 0.43
SGMS1-203ENST00000429490 THOC2Q8NI27 1593 aaKnown RBP17.71■□□□□ 0.43
SGMS1-203ENST00000429490 URB2Q14146 1524 aaKnown RBP17.7■□□□□ 0.42
SGMS1-203ENST00000429490 FTSJ3Q8IY81 847 aaKnown RBP17.7■□□□□ 0.42
SGMS1-203ENST00000429490 CARMIL2Q6F5E8 1435 aa17.69■□□□□ 0.42
SGMS1-203ENST00000429490 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
SGMS1-203ENST00000429490 BCAR3O75815 825 aa17.68■□□□□ 0.42
SGMS1-203ENST00000429490 SAFB2Q14151 953 aaKnown RBP eCLIP17.68■□□□□ 0.42
SGMS1-203ENST00000429490 KDM6BO15054 1643 aa17.68■□□□□ 0.42
SGMS1-203ENST00000429490 HECW1Q76N89 1606 aa17.68■□□□□ 0.42
SGMS1-203ENST00000429490 CUL7Q14999 1698 aa17.67■□□□□ 0.42
SGMS1-203ENST00000429490 PANK1Q8TE04 598 aa17.66■□□□□ 0.42
SGMS1-203ENST00000429490 MORC1Q86VD1 984 aa17.65■□□□□ 0.42
SGMS1-203ENST00000429490 MAGI3Q5TCQ9 1506 aa17.65■□□□□ 0.42
SGMS1-203ENST00000429490 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
SGMS1-203ENST00000429490 PPP2R1AP30153 589 aa17.64■□□□□ 0.41
SGMS1-203ENST00000429490 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
SGMS1-203ENST00000429490 CENPJQ9HC77 1338 aaPredicted RBP17.63■□□□□ 0.41
SGMS1-203ENST00000429490 TROQ12816 1431 aaPredicted RBP17.62■□□□□ 0.41
SGMS1-203ENST00000429490 NAP1L5Q96NT1 182 aaPredicted RBP17.61■□□□□ 0.41
SGMS1-203ENST00000429490 C9orf84Q5VXU9 1444 aa17.61■□□□□ 0.41
SGMS1-203ENST00000429490 PLB1Q6P1J6 1458 aa17.61■□□□□ 0.41
SGMS1-203ENST00000429490 MFAP1P55081 439 aaKnown RBP17.6■□□□□ 0.41
SGMS1-203ENST00000429490 IQGAP2Q13576 1575 aa17.6■□□□□ 0.41
SGMS1-203ENST00000429490 SPATA31E1Q6ZUB1 1445 aa17.59■□□□□ 0.41
SGMS1-203ENST00000429490 TEX14Q8IWB6 1497 aa17.59■□□□□ 0.41
SGMS1-203ENST00000429490 NUTM2DQ5VT03 806 aaPredicted RBP17.59■□□□□ 0.41
SGMS1-203ENST00000429490 CAMSAP2Q08AD1 1489 aa17.59■□□□□ 0.41
SGMS1-203ENST00000429490 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
SGMS1-203ENST00000429490 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
SGMS1-203ENST00000429490 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
SGMS1-203ENST00000429490 CFAP53Q96M91 514 aa17.58■□□□□ 0.41
SGMS1-203ENST00000429490 CTTNBP2Q8WZ74 1663 aa17.58■□□□□ 0.4
SGMS1-203ENST00000429490 TRAK1Q9UPV9 953 aa17.57■□□□□ 0.4
SGMS1-203ENST00000429490 KIF3BO15066 747 aa17.56■□□□□ 0.4
SGMS1-203ENST00000429490 DENND4BO75064 1496 aaPredicted RBP17.55■□□□□ 0.4
SGMS1-203ENST00000429490 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
SGMS1-203ENST00000429490 E9PSI1 815 aa17.54■□□□□ 0.4
SGMS1-203ENST00000429490 PRKCSHP14314 528 aaPredicted RBP17.54■□□□□ 0.4
SGMS1-203ENST00000429490 DISP3Q9P2K9 1392 aa17.54■□□□□ 0.4
SGMS1-203ENST00000429490 FOXD4L1Q9NU39 408 aa17.53■□□□□ 0.4
SGMS1-203ENST00000429490 ITPRIPQ8IWB1 547 aa17.53■□□□□ 0.4
SGMS1-203ENST00000429490 KDM5BQ9UGL1 1544 aa17.53■□□□□ 0.4
SGMS1-203ENST00000429490 DUSP27Q5VZP5 1158 aa17.52■□□□□ 0.4
SGMS1-203ENST00000429490 SLC24A1O60721 1099 aa17.52■□□□□ 0.39
SGMS1-203ENST00000429490 PZPP20742 1482 aa17.52■□□□□ 0.39
SGMS1-203ENST00000429490 ARHGEF11O15085 1522 aa17.51■□□□□ 0.39
SGMS1-203ENST00000429490 RSPH4AQ5TD94 716 aa17.51■□□□□ 0.39
SGMS1-203ENST00000429490 TRIM44Q96DX7 344 aaPredicted RBP17.51■□□□□ 0.39
SGMS1-203ENST00000429490 EFCAB2Q5VUJ9 269 aa17.51■□□□□ 0.39
SGMS1-203ENST00000429490 STK26Q9P289 416 aa17.51■□□□□ 0.39
SGMS1-203ENST00000429490 CFAP70Q5T0N1 1121 aa17.5■□□□□ 0.39
SGMS1-203ENST00000429490 PTPRGP23470 1445 aa17.5■□□□□ 0.39
SGMS1-203ENST00000429490 ZNF608Q9ULD9 1512 aaPredicted RBP17.5■□□□□ 0.39
SGMS1-203ENST00000429490 PER1O15534 1290 aaPredicted RBP17.5■□□□□ 0.39
SGMS1-203ENST00000429490 NCLP19338 710 aaKnown RBP17.5■□□□□ 0.39
SGMS1-203ENST00000429490 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
SGMS1-203ENST00000429490 GGT6Q6P531 493 aa17.49■□□□□ 0.39
SGMS1-203ENST00000429490 POGKQ9P215 609 aa17.49■□□□□ 0.39
SGMS1-203ENST00000429490 CGNL1Q0VF96 1302 aa17.49■□□□□ 0.39
SGMS1-203ENST00000429490 MAPK8IP3Q9UPT6 1336 aa17.49■□□□□ 0.39
SGMS1-203ENST00000429490 SMC4Q9NTJ3 1288 aa17.49■□□□□ 0.39
SGMS1-203ENST00000429490 ERBINQ96RT1 1412 aa17.49■□□□□ 0.39
SGMS1-203ENST00000429490 GPATCH8Q9UKJ3 1502 aaKnown RBP17.48■□□□□ 0.39
SGMS1-203ENST00000429490 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
SGMS1-203ENST00000429490 SPAG9O60271 1321 aaKnown RBP17.48■□□□□ 0.39
SGMS1-203ENST00000429490 HSCBQ8IWL3 235 aa17.48■□□□□ 0.39
SGMS1-203ENST00000429490 PMFBP1Q8TBY8 1022 aa17.48■□□□□ 0.39
SGMS1-203ENST00000429490 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
SGMS1-203ENST00000429490 LRPPRCP42704 1394 aaKnown RBP17.47■□□□□ 0.39
SGMS1-203ENST00000429490 ANP32BQ92688 251 aaKnown RBP17.47■□□□□ 0.39
SGMS1-203ENST00000429490 SLFN5Q08AF3 891 aa17.47■□□□□ 0.39
SGMS1-203ENST00000429490 L1TD1Q5T7N2 865 aaKnown RBP17.47■□□□□ 0.39
SGMS1-203ENST00000429490 AFAP1Q8N556 730 aa17.47■□□□□ 0.39
SGMS1-203ENST00000429490 WASHC2CQ9Y4E1 1318 aa17.46■□□□□ 0.39
SGMS1-203ENST00000429490 IGHDP01880 384 aa17.46■□□□□ 0.38
SGMS1-203ENST00000429490 KIAA0586Q9BVV6 1533 aa17.46■□□□□ 0.38
SGMS1-203ENST00000429490 GOLGA6L3A6NEY3 463 aa17.45■□□□□ 0.38
SGMS1-203ENST00000429490 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
SGMS1-203ENST00000429490 STAG3Q9UJ98 1225 aa17.45■□□□□ 0.38
SGMS1-203ENST00000429490 SRPK2P78362 688 aaKnown RBP17.45■□□□□ 0.38
SGMS1-203ENST00000429490 TPRNQ4KMQ1 711 aa17.45■□□□□ 0.38
SGMS1-203ENST00000429490 PARD3Q8TEW0 1356 aa17.44■□□□□ 0.38
SGMS1-203ENST00000429490 TESK2Q96S53 571 aa17.44■□□□□ 0.38
SGMS1-203ENST00000429490 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
SGMS1-203ENST00000429490 C8orf34Q49A92 452 aa17.44■□□□□ 0.38
SGMS1-203ENST00000429490 TCP11L2Q8N4U5 519 aa17.44■□□□□ 0.38
SGMS1-203ENST00000429490 RALGAPBQ86X10 1494 aa17.43■□□□□ 0.38
SGMS1-203ENST00000429490 PNNQ9H307 717 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms