RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 A2MP01023 1474 aa16.1■□□□□ 0.17
CRIM1-204ENST00000428774 REREQ9P2R6 1566 aa16.1■□□□□ 0.17
CRIM1-204ENST00000428774 PRDM15P57071 1507 aaPredicted RBP16.09■□□□□ 0.17
CRIM1-204ENST00000428774 CCER1Q8TC90 406 aaPredicted RBP16.08■□□□□ 0.16
CRIM1-204ENST00000428774 ATP10AO60312 1499 aa16.07■□□□□ 0.16
CRIM1-204ENST00000428774 FAM135AQ9P2D6 1515 aa16.07■□□□□ 0.16
CRIM1-204ENST00000428774 CEP152O94986 1710 aa16.06■□□□□ 0.16
CRIM1-204ENST00000428774 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
CRIM1-204ENST00000428774 DHX29Q7Z478 1369 aaKnown RBP16.06■□□□□ 0.16
CRIM1-204ENST00000428774 TET3O43151 1660 aa16.03■□□□□ 0.16
CRIM1-204ENST00000428774 TRIM52Q96A61 297 aa16.03■□□□□ 0.16
CRIM1-204ENST00000428774 ACIN1Q9UKV3 1341 aaKnown RBP16.02■□□□□ 0.16
CRIM1-204ENST00000428774 AGLP35573 1532 aa16.01■□□□□ 0.15
CRIM1-204ENST00000428774 E9PCH4 1651 aa16.01■□□□□ 0.15
CRIM1-204ENST00000428774 ZC3H13Q5T200 1668 aaKnown RBP16.01■□□□□ 0.15
CRIM1-204ENST00000428774 NUP155O75694 1391 aa16■□□□□ 0.15
CRIM1-204ENST00000428774 CLSPNQ9HAW4 1339 aa15.99■□□□□ 0.15
CRIM1-204ENST00000428774 CAMSAP1Q5T5Y3 1602 aa15.97■□□□□ 0.15
CRIM1-204ENST00000428774 MPHOSPH9Q99550 1183 aa15.97■□□□□ 0.15
CRIM1-204ENST00000428774 ADAMTSL3P82987 1691 aa15.97■□□□□ 0.15
CRIM1-204ENST00000428774 EFCAB6Q5THR3 1501 aa15.97■□□□□ 0.15
CRIM1-204ENST00000428774 LMTK2Q8IWU2 1503 aa15.97■□□□□ 0.15
CRIM1-204ENST00000428774 FER1L4A9Z1Z3 1794 aa15.97■□□□□ 0.15
CRIM1-204ENST00000428774 MADDQ8WXG6 1647 aa15.97■□□□□ 0.15
CRIM1-204ENST00000428774 ARID4BQ4LE39 1312 aaPredicted RBP15.96■□□□□ 0.15
CRIM1-204ENST00000428774 MLECQ14165 292 aa15.96■□□□□ 0.15
CRIM1-204ENST00000428774 ABCC3O15438 1527 aa15.95■□□□□ 0.14
CRIM1-204ENST00000428774 SPHKAPQ2M3C7 1700 aa15.95■□□□□ 0.14
CRIM1-204ENST00000428774 KIF3BO15066 747 aa15.95■□□□□ 0.14
CRIM1-204ENST00000428774 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
CRIM1-204ENST00000428774 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
CRIM1-204ENST00000428774 CLTCQ00610 1675 aaKnown RBP15.93■□□□□ 0.14
CRIM1-204ENST00000428774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.14
CRIM1-204ENST00000428774 KANK1Q14678 1352 aa15.91■□□□□ 0.14
CRIM1-204ENST00000428774 FOXD1Q16676 465 aa15.91■□□□□ 0.14
CRIM1-204ENST00000428774 ANKRD30BQ9BXX2 1392 aa15.9■□□□□ 0.14
CRIM1-204ENST00000428774 KDM4FA0A1W2PPD8 638 aa15.89■□□□□ 0.13
CRIM1-204ENST00000428774 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
CRIM1-204ENST00000428774 PKD2Q13563 968 aa15.89■□□□□ 0.13
CRIM1-204ENST00000428774 GGT6Q6P531 493 aa15.88■□□□□ 0.13
CRIM1-204ENST00000428774 TRPM2O94759 1503 aa15.88■□□□□ 0.13
CRIM1-204ENST00000428774 PLA2R1Q13018 1463 aa15.86■□□□□ 0.13
CRIM1-204ENST00000428774 SIN3AQ96ST3 1273 aa15.86■□□□□ 0.13
CRIM1-204ENST00000428774 CLTCL1P53675 1640 aa15.86■□□□□ 0.13
CRIM1-204ENST00000428774 C3P01024 1663 aa15.86■□□□□ 0.13
CRIM1-204ENST00000428774 RPRD2Q5VT52 1461 aaKnown RBP15.85■□□□□ 0.13
CRIM1-204ENST00000428774 PREX1Q8TCU6 1659 aa15.85■□□□□ 0.13
CRIM1-204ENST00000428774 MROH2AA6NES4 1674 aa15.84■□□□□ 0.13
CRIM1-204ENST00000428774 NPATQ14207 1427 aa15.84■□□□□ 0.13
CRIM1-204ENST00000428774 PTPRTO14522 1441 aa15.82■□□□□ 0.12
CRIM1-204ENST00000428774 SYNMO15061 1565 aa15.82■□□□□ 0.12
CRIM1-204ENST00000428774 CFAP65Q6ZU64 1925 aaKnown RBP15.82■□□□□ 0.12
CRIM1-204ENST00000428774 UGGT1Q9NYU2 1555 aa15.81■□□□□ 0.12
CRIM1-204ENST00000428774 PIK3C2BO00750 1634 aa15.8■□□□□ 0.12
CRIM1-204ENST00000428774 ARHGAP31Q2M1Z3 1444 aa15.8■□□□□ 0.12
CRIM1-204ENST00000428774 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
CRIM1-204ENST00000428774 PTPRMP28827 1452 aa15.79■□□□□ 0.12
CRIM1-204ENST00000428774 NEUROD1Q13562 356 aa15.79■□□□□ 0.12
CRIM1-204ENST00000428774 KIF1BO60333 1816 aa15.78■□□□□ 0.12
CRIM1-204ENST00000428774 CCDC144AA2RUR9 1427 aa15.77■□□□□ 0.12
CRIM1-204ENST00000428774 WASHC2CQ9Y4E1 1318 aa15.77■□□□□ 0.12
CRIM1-204ENST00000428774 CEBPAP49715 358 aaPredicted RBP15.77■□□□□ 0.12
CRIM1-204ENST00000428774 NOS1P29475 1434 aa15.77■□□□□ 0.11
CRIM1-204ENST00000428774 TONSLQ96HA7 1378 aa15.76■□□□□ 0.11
CRIM1-204ENST00000428774 SPATA31D1Q6ZQQ2 1576 aa15.76■□□□□ 0.11
CRIM1-204ENST00000428774 CNTLNQ9NXG0 1405 aa15.76■□□□□ 0.11
CRIM1-204ENST00000428774 ERVK-7P63135 1459 aa15.75■□□□□ 0.11
CRIM1-204ENST00000428774 NEURL4Q96JN8 1562 aa15.75■□□□□ 0.11
CRIM1-204ENST00000428774 IFT172Q9UG01 1749 aa15.74■□□□□ 0.11
CRIM1-204ENST00000428774 ADGRB3O60242 1522 aa15.74■□□□□ 0.11
CRIM1-204ENST00000428774 ZMYM3Q14202 1370 aa15.74■□□□□ 0.11
CRIM1-204ENST00000428774 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
CRIM1-204ENST00000428774 ESF1Q9H501 851 aaKnown RBP15.72■□□□□ 0.11
CRIM1-204ENST00000428774 MYO5BQ9ULV0 1848 aa15.72■□□□□ 0.11
CRIM1-204ENST00000428774 SPATA31E1Q6ZUB1 1445 aa15.71■□□□□ 0.11
CRIM1-204ENST00000428774 FBXO31Q5XUX0 539 aaPredicted RBP15.7■□□□□ 0.1
CRIM1-204ENST00000428774 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
CRIM1-204ENST00000428774 MYO3AQ8NEV4 1616 aa15.68■□□□□ 0.1
CRIM1-204ENST00000428774 PPLO60437 1756 aa15.68■□□□□ 0.1
CRIM1-204ENST00000428774 TMEM131LA2VDJ0 1609 aa15.67■□□□□ 0.1
CRIM1-204ENST00000428774 L3MBTL2Q969R5 705 aa15.66■□□□□ 0.1
CRIM1-204ENST00000428774 TRPM1Q7Z4N2 1603 aa15.64■□□□□ 0.09
CRIM1-204ENST00000428774 PPP1R15AO75807 674 aaPredicted RBP15.63■□□□□ 0.09
CRIM1-204ENST00000428774 KDM5AP29375 1690 aaKnown RBP15.63■□□□□ 0.09
CRIM1-204ENST00000428774 ZNF142P52746 1687 aaPredicted RBP15.63■□□□□ 0.09
CRIM1-204ENST00000428774 UBR1Q8IWV7 1749 aa15.62■□□□□ 0.09
CRIM1-204ENST00000428774 NEXMIFQ5QGS0 1516 aa15.62■□□□□ 0.09
CRIM1-204ENST00000428774 TNRQ92752 1358 aa15.62■□□□□ 0.09
CRIM1-204ENST00000428774 UHRF1BP1Q6BDS2 1440 aa15.61■□□□□ 0.09
CRIM1-204ENST00000428774 MYOM2P54296 1465 aa15.6■□□□□ 0.09
CRIM1-204ENST00000428774 SETD1BQ9UPS6 1966 aaKnown RBP15.6■□□□□ 0.09
CRIM1-204ENST00000428774 CEP170BQ9Y4F5 1589 aaPredicted RBP15.59■□□□□ 0.09
CRIM1-204ENST00000428774 PRAG1Q86YV5 1406 aa15.59■□□□□ 0.09
CRIM1-204ENST00000428774 RALGAPBQ86X10 1494 aa15.59■□□□□ 0.09
CRIM1-204ENST00000428774 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
CRIM1-204ENST00000428774 KIAA1210Q9ULL0 1709 aa15.57■□□□□ 0.08
CRIM1-204ENST00000428774 NBPF8Q3BBV2 869 aa15.57■□□□□ 0.08
CRIM1-204ENST00000428774 RGL3Q3MIN7 710 aa15.57■□□□□ 0.08
CRIM1-204ENST00000428774 AEBP2Q6ZN18 517 aaPredicted RBP15.56■□□□□ 0.08
CRIM1-204ENST00000428774 LAMC1P11047 1609 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms